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TranscriptomicsRegulon prediction of the sporulation factors Spo0A, SigF, SigE, and SigG in Clostridium acetobutylicum ATCC 824
Clostridium acetobutylicum, the endospore-forming anaerobe best known for its ABE (acetone-butanol-ethanol) fermentation, has received renewed attention recently for the biological production of butanol, both for bulk chemical production and as a potential biofuel. With butanol production in mind, m...
ORGANISM(S): Clostridium acetobutylicum ATCC 824 
2011-02-28 | E-GEOD-24103 | biostudies-arrayexpress
TranscriptomicsGlobal identification of yeast chromosome interactions using genome conformation capture
The objective of this study was to determine the global chromosomal interaction map for exponentially growing Saccharomyces cerevisiae cells using Genome Conformation Capture. Interactions between chromosomes were identified within a population of yeast cells growing exponentially in a semi-defined ...
ORGANISM(S): Saccharomyces cerevisiae 
2009-07-21 | E-GEOD-13648 | biostudies-arrayexpress
TranscriptomicsMetabolite stress response to butanol in Clostridium acetobutylicum ATCC 824
Clostridium acetobutylicum is a Gram positive, endospore forming firmicute that has been known as the model organims for ABE (acetone-butanol-ethanol) fermentation. With its ability to consume a wide variety of substrates, C. acetobutylicum carries out a biphasic ABE fermentation, which consists of ...
ORGANISM(S): Clostridium acetobutylicum ATCC 824 
2013-08-20 | E-GEOD-48031 | biostudies-arrayexpress
MetabolomicsMaHPIC Experiment HuC - Metabolomics of plasma samples from human volunteers infected with Plasmodium vivax
Project Description:
The Malaria Host-Pathogen Interaction Center (MaHPIC) is a transdisciplinary malaria systems biology research program initially supported by an NIH/NIAID contract (HHSN272201200031C, 2012-2017; see http://w...
2018-06-19 | MTBLS665 | MetaboLights
TranscriptomicsMetabolite stress response to butyric acid in Clostridium acetobutylicum ATCC 824
Clostridium acetobutylicum is a Gram positive, endospore forming firmicute that has been known as the model organims for ABE (acetone-butanol-ethanol) fermentation. With its ability to consume a wide variety of substrates, C. acetobutylicum carries out a biphasic ABE fermentation, which consists of ...
ORGANISM(S): Clostridium acetobutylicum ATCC 824 
2013-08-20 | E-GEOD-48039 | biostudies-arrayexpress
UnknownVibrio fischeri DarR Directs Responses to d-Aspartate and Represents a Group of Similar LysR-Type Transcriptional Regulators.
Not available
S-EPMC6040199 | biostudies-literature
TranscriptomicsS. cerevisiae mutant with a constitutively activated Ras/cAMP pathway
Comparison of the transcriptomes of Saccharomyces cerevisiae wild type FY23 and a PDE2 deletion mutant DJ28. Keywords = PDE2 Keywords = Ras/cAMP pathway
ORGANISM(S): Saccharomyces cerevisiae 
2010-06-05 | E-GEOD-600 | biostudies-arrayexpress
TranscriptomicsThe let-7-Imp axis regulates aging of the Drosophila testis stem cell niche.
Adult stem cells support tissue homeostasis and repair throughout the life of an individual. However, numerous intrinsic and extrinsic changes occur with age that result in altered stem cell behavior and reduced tissue maintenance and regeneration. In the Drosophila testis, stem cells surround and c...
ORGANISM(S): Drosophila melanogaster 
2012-05-31 | E-GEOD-37041 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis mutants in AtrbohC in primary root tissue
Aim: To determine the effect of an AtrbohC mutation on the gene expression pattern in primary root tissue, to identify candidate genes acting downstream of AtrbohC, particularly any encoding antioxidant-related proteins, signal transduction components or proteins known to be required for normal roo...
ORGANISM(S): Arabidopsis thaliana 
2022-11-21 | E-NASC-54 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of Arabidopsis mutant for rhd2/ArtbohC
Aim: To determine the effect of an AtrbohC mutation on the gene expression pattern in primary root tissue, to identify candidate genes acting downstream of AtrbohC, particularly any encoding antioxidant-related proteins, signal transduction components or proteins known to be required for normal roo...
ORGANISM(S): Arabidopsis thaliana 
2008-06-14 | E-GEOD-6165 | biostudies-arrayexpress
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