Joshi L L - OmicsDI

Show results for

Unknown (1648)
Transcriptomics (81)
Proteomics (44)
Genomics (19)
Metabolomics (5)
Genomic (1)

Organisms

Homo sapiens (47)
Mycobacterium tuberculosis SP7 (38)
Mycobacterium tuberculosis SP10 (38)
Mycobacterium tuberculosis SP13 (38)
Mycobacterium tuberculosis SP22 (38)
Chlamydomonas reinhardtii (38)
Enterococcus mundtii CRL35 (38)
Oncorhynchus tshawytscha (38)
Pseudomonas canadensis (38)
Pseudomonas aeruginosa PAO1H2O (38)
Mus musculus (27)
Saccharomyces cerevisiae (4)
Glycine max (3)
Brassica juncea (2)
Bradyrhizobium diazoefficiens USDA 110 (1)
Cicer arietinum (1)
environmental samples (1)
Bifidobacterium breve UCC2003 (1)
Salmonella enterica (1)
Fusarium graminearum (1)
Monodelphis domestica (1)
Lolium perenne (1)
mixed sample (1)
Solanum tuberosum (1)
Ovis aries (1)
Plasmodium falciparum (1)
Escherichia coli K-12 (1)
Triticum aestivum (1)
Canis lupus familiaris (1)
Rattus norvegicus (1)

Organisms

gut metagenome (1)

Repository

biostudies-arrayexpress (92)
pride (38)
EGA (5)
MetaboLights (5)
MassIVE (4)
ENA (3)
dbGaP (1)
iProX (1)
jPOST (1)

Tissue

Cell culture (9)
T cell (5)
Blood (5)
Epithelial cell (4)
Embryonic stem cell (2)
Kidney (2)
Blood cell (2)
Cholangiocyte (1)
Protein secretion (1)
Secretory cell (1)
Gametophyte (1)
T-lymphocyte (1)
Aorta (1)
Venom (1)
Early embryonic cell (1)
Blood serum (1)
Heart (1)
Brain (1)
Cell suspension culture (1)
Fibroblast (1)
Primary cell (1)
Hepatocyte (1)
Permanent cell line cell (1)
B cell (1)
Colon (1)

Disease

Acute leukemia (2)
Spinal muscular atrophy (NCI Metathesaurus C0026847) has DiseaseStaging postsymptomatic (1)
Dilatation of the ascending aorta (1)
Fascioliasis (1)
Congenital disorder of glycosylation Iq (1)
Barrett's esophagus (1)
Barrett's adenocarcinoma (1)
Polycystic Kidney (1)
Myocardial ischemia (1)
Urinary bladder cancer (1)
Breast cancer (1)
Disease free (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (38)
Shotgun proteomics (25)
Affinity purification coupled with mass spectrometry proteomics (7)
Mass spectrometry (5)
Bottom-up proteomics (4)
Data-independent acquisition (3)
Data-dependent acquisition (3)
Illumina HiSeq 2000 (1)
Affinity proteomics (1)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Illumina MiSeq (3)
Illumina HiSeq 2000 (3)
Chromium 10x (2)
NextSeq 550 (2)
Illumina HiSeq 2500 (2)
Illumina NovaSeq 6000 (2)
Q Exactive (2)
Illumina Truseq RNA Sample Preparation Kit (1)
TruSeq RNA Sample Preparation Kit (Illumina) (1)
Rneasy Plant Mini Kit (Qiagen) (1)
Illumina NovaSeq X (1)
KAPA mRNA HyperPrep Kit (Roche), SS NGS fragment kit (1-6,000 bp; Agilent) (1)
RNAdvance Cell v2, Biomek i7 Hybrid robotic workstation (both BeckmanCoulter) (1)
N/a (1)
NextSeq 500 (1)
LTQ Orbitrap Velos (1)
Orbitrap Fusion (1)
Q Exactive HF-X (1)
Orbitrap Fusion Lumos (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2015 (22)
2016 (12)
2014 (11)
2013 (9)
2021 (8)
2012 (8)
2008 (7)
2024 (7)
2019 (6)
2018 (6)
2011 (6)
2023 (5)
2022 (5)
2020 (5)
2017 (5)
2010 (4)
2007 (4)
2025 (4)
2026 (2)
2009 (2)
2005 (1)

CHEBI ID

CHEBI:16113 (3)
CHEBI:17822 (3)
CHEBI:26271 (3)
CHEBI:25094 (3)
CHEBI:22653 (3)
CHEBI:18186 (3)
CHEBI:28757 (3)
CHEBI:37684 (3)
CHEBI:26986 (3)
CHEBI:16811 (3)
CHEBI:17234 (3)
CHEBI:18257 (3)
CHEBI:16750 (3)
CHEBI:24898 (3)
CHEBI:25017 (3)
CHEBI:15428 (3)
CHEBI:17268 (3)
CHEBI:28044 (3)
CHEBI:27266 (3)
CHEBI:15891 (3)
CHEBI:16449 (3)
CHEBI:17596 (3)
CHEBI:83501 (2)
CHEBI:28623 (2)
CHEBI:9307 (2)
CHEBI:90344 (2)
CHEBI:34811 (2)
CHEBI:71464 (2)
CHEBI:28997 (2)
CHEBI:18222 (2)

Metabolite Name

Lactobacillic acid (2)
O-acetylhomoserine (2)
Acesulfame (2)
2'-O-methyluridine (2)
Fructosyllysine (2)
Sedoheptulose (2)
2'-deoxyinosine (2)
Succinimide (2)
Palmitoyl ethanolamide (2)
N-methylproline (2)
Xylose (2)
Trimethylamine N-oxide (2)
Sphinganine (2)
Ribitol (2)
Pyridoxate (2)
N-acetyltyrosine (2)
N-acetylputrescine (2)
N-acetylphenylalanine (2)
N-acetylhistidine (2)
N-acetylglycine (2)
N-acetylcitrulline (2)
N-acetylasparagine (2)
Gamma-glutamylthreonine (2)
Gamma-glutamylphenylalanine (2)
Gamma-glutamylalanine (2)
Erythritol (2)
Ergothioneine (2)
Cholesterol (2)
Alpha-tocopherol (2)
2'-deoxyuridine (2)

First Public Date

2026 (2)
2019 (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (2)
2x(15)N labeled L-lysine (1)
4x(2)H labeled dimethylated L-lysine (1)

Study type

Transcription profiling by array (40)
RNA-seq of coding RNA (20)
ChIP-seq (10)
Comparative genomic hybridization by array (4)
RNA-seq of non coding RNA (4)
Unknown experiment type (2)
Genotyping by array (2)
ScATAC-seq (2)
Methylation profiling by array (2)
Transcription profiling by SAGE (1)
Transcription profiling by RT-PCR (1)
ATAC-seq (1)
Other (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2021 (220)
2023 (192)
2022 (189)
2025 (185)
2024 (155)
2020 (123)
2019 (104)
2018 (91)
2015 (81)
2016 (74)
2014 (69)
2017 (62)
2013 (43)
2012 (34)
2026 (28)
2011 (24)
2010 (17)
2009 (16)
2008 (15)
2007 (8)
2005 (4)
2006 (1)
2004 (1)
2000 (1)
1999 (1)
1998 (1)
1997 (1)

Lab affiliation

Copenhagen Center for Glycomics and Department of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, DK-2200 Copenhagen N, Denmark (2)
Molecular Biology, Princeton University (1)
University of Copenahgen, Copenhagen Center for Glycomics (1)
Faculty of Health and Medical Sciences Department of Cellular and Molecular Medicine University of Copenhagen (1)
Division of Biotechnology, CSIR-Institute of Himalayan Bioresource Technology, Palampur-176061, Himachal Pradesh, India (1)
King's British Heart Foundation Centre, King's College London, London, UK (1)
Charles Perkins Centre, University of Sydney (1)
Copenhagen Center for Glycomics (CCG), Glyco-MS Group Department of Cellular and Molecular Medicine University of Copenhagen (1)
Babraham Institute Cambridge, UK (1)
School of Biological Sciences Medical Biology Centre Queen's University Belfast Belfast, N. Ireland (1)
Mayo Clinic, Rochester, USA (1)
Research group for Host-Microbe Interaction Department of Medical Biology Faculty of Health Sciences UiT- The Arctic University of Norway 9037 Tromsø NORWAY (1)
Associate Professor Glyco MS Group Copenhagen Center for Glycomics (CCG) Department of Cellular and Molecular Medicine (24.6.36) University of Copenahgen Blegdamsvej 3 2200 Copenhagen N Denmark (1)
Department of Radiation Oncology, University of Colorado, Anschutz Medical Campus, Aurora, CO, 80045, United States Department of Microbiology and Immunology, University of Colorado, Anschutz Medical Campus, Aurora, CO, 80045, United States (1)
Copenhagen Center for Glycomics (CCG), Department of Cellular and Molecular Medicine, University of Copenhagen, Denmark (1)
Lowy Cancer Research Centre School of Medical Sciences UNSW SYDNEY NSW 2052 AUSTRALIA (1)
Department of Biochemistry and Microbiology, L-Probe Lab Ghent University (1)
Maynooth University Department of Biology Maynooth University, Maynooth, Co. Kildare, Ireland. (1)
Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, University of Copenhagen (1)
vo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark (1)
Laboratory of Cell Biology, National Cancer Institute, National Institutes of Health (1)
Département de Biologie Cellulaire Université de Genève Sciences III 30, quai Ernest-Ansermet CH - 1211 Genève 4, Switzerland (1)
Department of Molecular, Cellular & Biomedical Sciences, University of New Hampshire, Durham, NH 03824, USA Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA. (1)
Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY (1)
Karoliniska Institutet, Department of Oncology-Pathology (1)
Department of Cellular and Molecular Medicine, University of Copenhagen (1)
Akhilesh Pandey, M.D., Ph.D. Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota 55905, United States (1)
Département de Biologie Cellulaire, Université de Genève (1)
UQ Diamantina Institute (1)
Departments of Chemistry, Biological Sciences, Pathology, Microbiology and Immunology, Vanderbilt University (1)

Previous page
1 / 180
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 180
Next page

Sort by:

Relevance

Page size

A genome-wide perspective of miRNAome in response to high temperature, salinity and drought stresses in Brassica juncea (Czern) L.

Purpose: To identify high temperature, sailinity and drought-responsive miRNAs at genome wide level in B. juncea var varuna. Results: In this study four small RNA libraries viz. B. juncea control (BJC), B. juncea high temperature stressed (BJH), B. juncea salinity stressed (BJS) and B. juncea drough...

ORGANISM(S): Brassica juncea

2014-08-20 | E-GEOD-53242 | biostudies-arrayexpress

Identification and characterization of miRNAome in root, stem, leaf and tuber developmental stages of potato (Solanum tuberosum L.) by high-throughput sequencing

Purpose: MicroRNAs (miRNAs) are ubiquitous components of endogenous plant transcriptome. miRNAs are small, single-stranded and ~21 nt long RNAs which regulate gene expression at the post-transcriptional level and are known to play essential roles in various aspects of plant development and growth. P...

ORGANISM(S): Solanum tuberosum

2014-01-09 | E-GEOD-52599 | biostudies-arrayexpress

Draft genome sequence of an invasive plant Lantana camara L.

Not available

S-EPMC10326339 | biostudies-literature

Temporal and spatial changes in ion homeostasis, antioxidant defense and accumulation of flavonoids and glycolipid in a halophyte Sesuvium portulacastrum (L.) L.

Not available

S-EPMC5894978 | biostudies-literature

Alterations in the intrinsic properties of striatal cholinergic interneurons after dopamine lesion and chronic L-DOPA.

Not available

S-EPMC7380940 | biostudies-literature

Sequencing of d/l-DNA and XNA by Templated-Synthesis.

Not available

S-EPMC11848921 | biostudies-literature

Expression of non-phosphorylatable S5A-L-plastin exerts phenotypes distinct from L-plastin deficiency during podosome formation and phagocytosis.

Not available

S-EPMC10150066 | biostudies-literature

Genome-wide analysis of renal gene expression during hyperoxaluria development

Previous studies have proposed that production of reactive oxygen species (ROS) is an important contributor to renal injury and inflammation following exposure to oxalate or calcium-oxalate crystals. The present study was conducted to determine, utilizing global transcriptome analyses, if the NADPH...

ORGANISM(S): Rattus norvegicus

2012-12-20 | E-GEOD-36446 | biostudies-arrayexpress

Mining and characterization of EST derived microsatellites in Curcuma longa L.

Not available

S-EPMC3040487 | biostudies-literature

Rhizosphere microbiome analysis of healthy and infected cumin (Cuminum cyminum L.) varieties from Gujarat, India.

Not available

S-EPMC9742993 | biostudies-literature