OmicsDI
Toggle navigation
Browse
Submit Data
Databases
API
Advanced
Search
4294
Results
Show all
Save search
Copy query
Show results for
Unknown
(3612)
Proteomics
(252)
Transcriptomics
(203)
Genomics
(177)
Metabolomics
(35)
Models
(8)
Other
(4)
Genomic
(2)
Multiomics
(2)
Organisms
Homo sapiens
(298)
Mus musculus
(60)
Schizosaccharomyces pombe
(35)
Drosophila melanogaster
(10)
Arabidopsis thaliana
(8)
Rattus norvegicus
(6)
Saccharomyces cerevisiae
(5)
Severe acute respiratory syndrome coronavirus 2
(4)
Sus scrofa
(4)
Pseudomonas putida
(3)
Oryctolagus cuniculus
(2)
Solanum tuberosum subsp. andigenum
(2)
Ectocarpus siliculosus
(2)
Branchiostoma lanceolatum
(1)
Capsella grandiflora
(1)
Triticum turgidum subsp. durum
(1)
Strongylocentrotus purpuratus
(1)
Brucella abortus
(1)
Chlorocebus aethiops
(1)
Oryzias latipes
(1)
Macaca mulatta
(1)
Corynebacterium glutamicum
(1)
Mycobacterium avium
(1)
Streptomyces coelicolor
(1)
Medicago truncatula
(1)
Oncorhynchus mykiss
(1)
Glycine max
(1)
Ovis aries
(1)
Oryza sativa Japonica Group
(1)
Caenorhabditis elegans
(1)
Organisms
Bos taurus
(2)
Desulfurobacterium sp. AVO8
(1)
Drosophila melanogaster
(1)
Sus scrofa
(1)
Repository
biostudies-arrayexpress
(219)
EGA
(158)
pride
(116)
iProX
(74)
MassIVE
(34)
MetaboLights
(32)
PeptideAtlas
(18)
BioModels
(8)
PanoramaPublic
(6)
ENA
(5)
GNPS
(3)
GPMDB
(3)
dbGaP
(2)
jPOST
(2)
geo
(1)
PAXDB
(1)
Tissue
Others
(17)
Cell culture
(16)
Epithelial cell
(13)
Brain
(5)
Venom
(5)
Sciatic nerve
(4)
Leaf
(3)
Permanent cell line cell
(3)
Bone marrow
(2)
Breast
(2)
Breast cancer cell line
(2)
Fibroblast
(2)
Gland lumen
(2)
Heart
(2)
Kidney cell line
(2)
Lung
(2)
Macrophage
(2)
Sperm
(2)
Stomach
(2)
Urine
(2)
Plasma Non-glyco
(1)
Basal cell
(1)
Blood
(1)
Blood cancer cell
(1)
Blood plasma
(1)
Bone cancer cell line
(1)
Brain cancer cell line
(1)
Breast cancer cell
(1)
Brown adipose tissue
(1)
Cecum cancer cell line
(1)
Disease
Breast cancer
(7)
Not Available
(3)
Lung cancer
(3)
Type 1 diabetes mellitus
(3)
COVID-19
(2)
Normal
(2)
Disease free
(2)
Duchenne muscular dystrophy
(2)
Neuroblastoma
(2)
Cirrhosis
(1)
Alzheimer's disease
(1)
Cardiovascular system disease
(1)
Chronic kidney disease
(1)
Colon cancer
(1)
DOID:14563
(1)
Down syndrome
(1)
Inflammation
(1)
Ischemia
(1)
Lung adenocarcinoma
(1)
Malignant neoplasm of ovary
(1)
Melanoma
(1)
Prostate adenocarcinoma
(1)
Stomach cancer
(1)
Thoracic aortic aneurysm
(1)
Tuberculosis
(1)
Visceral leishmaniasis
(1)
Wounds and Injuries
(1)
Zika fever
(1)
Technology Type
Mass Spectrometry
(116)
Shotgun proteomics
(39)
Bottom-up proteomics
(29)
Mass spectrometry
(26)
Chemical cross-linking coupled with mass spectrometry proteomics
(16)
Data-dependent acquisition
(15)
Affinity purification coupled with mass spectrometry proteomics
(10)
Gel-based experiment
(9)
Top-down proteomics
(8)
Data-independent acquisition
(5)
Mass spectrometry assay
(4)
SRM/MRM
(4)
NMR spectroscopy
(2)
SWATH MS
(2)
ABI_SOLID, Illumina HiSeq 2000, Illumina 450K, AB 5500xl Genetic Analyzer, AB 5500 Genetic Analyzer, ILLUMINA
(1)
AB 5500xl Genetic Analyzer
(1)
Illumina 1.2M, Affymetrix 6.0, Affymetrix 6.0 - CHIAMO
(1)
Illumina 1.2M, Illumina 610K Quad, Affymetrix 6.0
(1)
Illumina 1.2M, Affymetrix 6.0
(1)
Illumina_670k - Illuminus, Affymetrix 6.0, Illumina 1.2M
(1)
Illumina Genome Analyzer II, Affymetrix snp 6.0, Illumina Genome Analyzer IIx, GPL570, Affymetrix GeneChip Human Genome U133 plus 2.0
(1)
Affymetrix 6.0
(1)
Affymetrix 6.0, Illumina_670k - Illuminus, Illumina 1.2M
(1)
Illumina HiSeq 2000
(1)
Unknown
(1)
Affinity proteomics
(1)
DiaPASEF
(1)
Mass spectrometry imaging
(1)
Olink affinity proteomics
(1)
Instrument Platform
LTQ Orbitrap Velos
(9)
Axon GenePix 4000B scanning hardware
(7)
Q Exactive
(7)
NextSeq 500
(6)
LTQ Orbitrap
(4)
Illumina NovaSeq 6000
(3)
Illumina HiSeq 2000
(3)
Instrument
(3)
Illumina Genome Analyzer IIx
(2)
Illumina MiSeq
(2)
Illumina HiSeq 2500
(2)
STAR v2.5.3a, rpkmforgenes, RSeQC 2.6.1
(1)
Illumina Nextera XT index kits (Set A–D)
(1)
Oligo(dT) primer and SuperScript II reverse transcriptase (ThermoFisher Scientific), TapeStation 4200 or 2100 Bioanalyzer with a DNA High Sensitivity chip (Agilent Biotechnologies)
(1)
Aria III (BD Biosciences)
(1)
InnoScan 900
(1)
ScanArray 4000 [PerkinElmer]
(1)
GenePix Personal 4100A [Axon Instruments]
(1)
NanoDrop
(1)
GenePix 4000B [Axon Instruments]
(1)
Ion Torrent Proton
(1)
N/A
(1)
NextSeq 2000
(1)
Illumina HiSeq 1000
(1)
NextSeq 550
(1)
Illumina HiSeq 3000
(1)
ITQ 1100
(1)
Thermo Fisher Scientific (MA, USA) Q Exactive hybrid quadrupole-orbitrap mass spectrometer
(1)
Thermo Fisher Scientific (MA, USA) Vanquish Horizon Duo ultra-high performance liquid chromatography (UHPLC) system with an Accucore C18 column with 150 mm length, 2.1 mm internal diameter, and 2.6 µm particle size
(1)
Thermo Q-Exactive Orbitrap
(1)
Publication Date
2014
(46)
2024
(38)
2013
(38)
2022
(36)
2021
(33)
2026
(30)
2025
(28)
2019
(26)
2016
(26)
2020
(25)
2023
(25)
2012
(23)
2010
(23)
2011
(19)
2008
(19)
2015
(18)
2018
(16)
2017
(12)
2004
(12)
2007
(7)
2009
(5)
2006
(3)
2005
(2)
UNIPROT ID/AC
Q3UNK5
(1)
P70293
(1)
C4NUM1
(1)
ACCA_BORPE
(1)
ACP_BORPE
(1)
AMPA_BORPE
(1)
APAG_BORPE
(1)
APT_BORPE
(1)
ARGB_BORPE
(1)
ARGC_BORPE
(1)
ARGD1_BORPE
(1)
ARGD2_BORPE
(1)
ARGJ_BORPE
(1)
ARLY_BORPE
(1)
AROC_BORPE
(1)
AROQ_BORPE
(1)
ASSY_BORPE
(1)
ATPA_BORPE
(1)
ATPB_BORPE
(1)
ATPD_BORPE
(1)
ATPF_BORPE
(1)
ATPG_BORPE
(1)
BAMB_BORPE
(1)
BFRD_BORPE
(1)
BRKA_BORPE
(1)
BVGA_BORPE
(1)
BVGS_BORPE
(1)
CATA_BORPE
(1)
CH10_BORPE
(1)
CH60_BORPE
(1)
ENSEMBL ID
ENSG00000170477
(18)
ENSG00000147251
(4)
ENSG00000247315
(3)
ENSG00000204131
(1)
CHEBI ID
CHEBI:62959
(1)
CHEBI:62958
(1)
CHEBI:32797
(1)
CHEBI:380
(1)
CHEBI:11036
(1)
CHEBI:16782
(1)
CHEBI:18739
(1)
CHEBI:18738
(1)
CHEBI:62621
(1)
CHEBI:26638
(1)
CHEBI:47569
(1)
CHEBI:9098
(1)
CHEBI:27277
(1)
CHEBI:30816
(1)
CHEBI:46315
(1)
CHEBI:27278
(1)
CHEBI:15301
(1)
CHEBI:9933
(1)
CHEBI:16632
(1)
CHEBI:46497
(1)
CHEBI:46502
(1)
CHEBI:36272
(1)
CHEBI:30518
(1)
CHEBI:36271
(1)
CHEBI:26894
(1)
CHEBI:9474
(1)
CHEBI:45729
(1)
CHEBI:27902
(1)
CHEBI:71392
(1)
CHEBI:77932
(1)
Metabolite Name
L-Tyrosine
(5)
Tyrosine
(4)
Lysine
(4)
Leucine
(4)
Glycine
(4)
Alanine
(4)
Tryptophan
(4)
Pyroglutamic acid
(4)
L-Leucine
(4)
Uric acid
(4)
L-Serine
(4)
L-Phenylalanine
(4)
Succinic acid
(4)
Citric acid
(4)
L-Glutamine
(4)
Tryptophan
(4)
L-Valine
(4)
Valine
(3)
Threonine
(3)
Serine
(3)
Phenylalanine
(3)
Isoleucine
(3)
Glutamine
(3)
Choline
(3)
Arginine
(3)
Ornithine
(3)
L-Kynurenine
(3)
Taurine
(3)
Creatine
(3)
Glycine
(3)
First Public Date
2014
(3)
2021
(1)
2013
(1)
Modelling Approach
Constraint-based model
(4)
Population model
(2)
Ordinary differential equation model
(2)
Lab affiliation
Evolutionary and translational venomics Lab, Instituto de Biomedicina de Valencia, CSIC
(6)
Bioinformatics
(3)
Departamento de Medicina Animal, Hospital Clínico Veterinario Universidad de Extremadura Avd de la Universidad s/n 10003 Cáceres SPAIN
(2)
Department of Cell and Developmental Biology, Neuroscience Graduate Program, Department of Neurology University of Michigan Medical School, Ann Arbor, MI 48109-2200
(2)
Department of Life Science, National Taiwan University
(2)
Department of Physiology, Faculty of Pharmacy, University of Valencia, Burjassot, Valencia, Spain
(2)
Institute of Molecular and Cellular Biology, Department of Life Science, National Taiwan University, Taipei, Taiwan
(2)
Institute of molecular and cellular biology
(2)
Instituto de Biotecnología y Biología Molecular (IBBM-CONICET). La Plata, Buenos Aires, Argentina.
(2)
Pacific Northwest National Laboratory
(2)
Universitat Internacional de Catalunya, Barcelona, Spain.
(2)
1,College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi 712100, China 2,Key Laboratory of Animal Biotechnology, Ministry of Agriculture, Northwest A&F University, Yangling, Shaanxi 712100, China
(1)
1. Wellcome Centre for Cell Biology, University of Edinburgh, Edinburgh EH9 3BF, UK 2. Technical University, Berlin 13355, Germany
(1)
1.Wellcome Centre for Cell Biology, University of Edinburgh, Edinburgh EH9 3BF, United Kingdom 2.Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, Gustav-Meyer-Allee 25, 13355 Berlin, Germany
(1)
1Wellcome Centre for Cell Biology, School of Biological Sciences, University of Edinburgh 2Chair of Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, Berlin, 13355, Germany
(1)
Abiel Roche-Lima, MSc., PhD. Assistant Professor Director, Integrated Informatics Services core IIS-RCMI University of Puerto Rico Medical Science Campus RCMI Program PO Box 365067 San Juan, PR. 00936-5067 Phone: +1 787 758-2525 x 2194
(1)
Australian Proteome Analysis Facility, Macquarie University, NSW 2109, Australia
(1)
BioMedizinisches Centrum Walter-Brendel-Zentrum für Experimentelle Medizin Ludwig-Maximilians-Universität München
(1)
Biochemistry and Cell Signalling in Nitric Oxide Group Area of Biochemistry and Molecular Biology. Department of Experimental Biology. University of Jaén /University Institute for Research in Olive Oil and Olive Oils (Spain)
(1)
Biochemistry and Molecular Biology Area Departament of Experimental biology University of Jaen (Spain) Campus Las Lagunillas, B3-356 23071, Jaén, Tel.: 953212523
(1)
Biological Sciences Division, Pacific Northwest National Laboratory
(1)
Biomedical Research in Melanoma-Animal Models and Cancer Laboratory Vall d'Hebron Research Institute (VHIR), Vall d'Hebron Hospital Barcelona-UAB Barcelona, 08035, Spain.
(1)
Biomedical Research in Melanoma-Animal Models and Cancer Laboratory- Vall d´Hebron Research Institute VHIR-Vall d’Hebron Hospital Barcelona-UAB 08035, Spain.
(1)
Biomolecular Mass Spectrometry and Proteomics, BijvoetCenter for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands
(1)
CNIO
(1)
CSIC-UAB Proteomics Laboratory IIBB-CSIC Rosello 161, 6 planta 08036 Barcelona Spain
(1)
Cancer Biomarkers Research Group Health Research Institute-Fundacion Jimenez Diaz (IIS-FJD, UAM) Madrid, Spain
(1)
Center for Neural Science and Medicine, Board of Governors Regenerative Medicine Institute, Departments of Biomedical Sciences and Neurology, Cedars-Sinai Medical Center, Los Angeles, CA, USA
(1)
Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader, 88, 08003 Barcelona, Spain
(1)
Centro de Investigaciones Biológicas, Consejo Superior de Investigaciones Científicas (CSIC), and Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), Madrid 28040, Spain; eunate.gallardo@yale.edu (E.G.-V.); lruiz.llorente@cib.csic.es (L.R.-L.); bernabeu.c@cib.csic.es (C.B.)
(1)
Tags
xref:PubMed:22428004
(1)
xref:EuropePMC:PMC8388535
(1)
xref:PubMed:22412878
(1)
xref:PubMed:20620954
(1)
xref:PubMed:20504330
(1)
IsPrivate
False
(8)
Model Flag
Non Kinetic
(3)
Submitter Keywords
FROG
(2)
COVID-19
(2)
Immuno-oncology
(1)
Modification
Not available
(4)
15.994915
(2)
42.010565
(2)
-17.026549
(1)
0.0
(1)
0.984016
(1)
10.008269
(1)
144.102062
(1)
57.021464
(1)
58.005479
(1)
Study type
Transcription profiling by array
(127)
RNA-seq of coding RNA
(26)
ChIP-seq
(11)
Methylation profiling by array
(10)
Comparative genomic hybridization by array
(7)
RNA-seq of non coding RNA
(5)
Transcription profiling by tiling array
(4)
Other
(4)
Translation profiling
(3)
ChIP-chip by array
(3)
Unknown experiment type
(2)
Genotyping by array
(2)
Antigen profiling
(2)
RNA-seq of coding RNA from single cells
(2)
RNA-seq of non coding RNA from single cells
(1)
ChIP-chip by tiling array
(1)
Animal - High-throughput sequencing
(1)
RNAi profiling by array
(1)
Capture-C
(1)
Transcription profiling by RT-PCR
(1)
MicroRNA profiling by high throughput sequencing
(1)
Hi-C
(1)
DNA-seq
(1)
Methylation profiling by high throughput sequencing
(1)
Release Date
2022
(456)
2025
(429)
2021
(429)
2023
(428)
2024
(336)
2020
(309)
2019
(240)
2018
(197)
2017
(161)
2016
(146)
2015
(132)
2014
(111)
2013
(94)
2012
(69)
2026
(68)
2011
(50)
2010
(49)
2009
(35)
2008
(28)
2007
(19)
2004
(15)
2006
(9)
2005
(6)
2003
(6)
2002
(3)
2000
(2)
2001
(1)
1999
(1)
1997
(1)
Previous
page
1 / 430
You're on page
1
page
2
page
3
page
4
page
5
page
...
page
430
Next
page
Sort
by:
Relevance
Page size
10
Historical Hot Spots of Dengue and Zika Viruses to Guide Targeted Vector Control in San Juan, Puerto Rico (2010-2022).
Not available
S-EPMC10993837
|
biostudies-literature
Cite
Medfly Population Suppression through Augmentative Release of an Introduced Parasitoid in an Irrigated Multi-Fruit Orchard of Central-Western Argentina.
Not available
S-EPMC10140834
|
biostudies-literature
Cite
The impact of a short-term cohousing initiative among schizophrenia patients, high school students, and their social context: A qualitative case study.
Not available
S-EPMC5764336
|
biostudies-literature
Cite
Progressive migration and anagenesis in Drimys confertifolia of the Juan Fernandez Archipelago, Chile.
Not available
S-EPMC4300435
|
biostudies-literature
Cite
Biodistance Analysis via Dental Phenotypic Diversity in Early Collective Burials at Cerro Juan Diaz, Panama (30-650 CE) [Analisis de Biodistancia Mediante la Diversidad Fenotipica Dental en los Entierros Colectivos Tempranos del Cerro Juan Diaz, Panama (30-650 EC)].
Not available
S-EPMC11660533
|
biostudies-literature
Cite
Application of Artificial Neural Networks for Dengue Fever Outbreak Predictions in the Northwest Coast of Yucatan, Mexico and San Juan, Puerto Rico.
Not available
S-EPMC6136605
|
biostudies-literature
Cite
NIAID bacterial proteomes - Analysis of the Salmonella typhimurium proteome through environmental response toward infectious conditions
Analysis of the Salmonella typhimurium proteome through environmental response toward infectious conditions
ORGANISM(S):
Salmonella typhimurium
2008-05-21
|
PRD000057
|
Pride
Cite
A first nuclear and mitochondrial genomic portrait of Robinson Crusoe's (Juan Fernandez Island) spiny lobster Jasus frontalis (Crustacea: Decapoda: Achelata).
Not available
S-EPMC12211721
|
biostudies-literature
Cite
Diversity and abundance of ammonia-oxidizing archaea in hydrothermal vent chimneys of the juan de fuca ridge.
Not available
S-EPMC2698363
|
biostudies-literature
Cite
Complete chloroplast genome of the marine red alga
Rhodochorton tenue
(Rhodochortonaceae, Rhodophyta) from San Juan Island, Washington.
Not available
S-EPMC10868208
|
biostudies-literature
Cite
Previous
page
1 / 430
You're on page
1
page
2
page
3
page
4
page
5
page
...
page
430
Next
page
Sort
by:
Relevance
Page size
10
OmicsDI
is part of the ELIXIR infrastructure
OmicsDI is an Elixir interoperability service.
Learn more ›
Tweets
