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TranscriptomicsTranscription profiling of by comparing human breast cancer cell line MDA-MB-468 cyclin E transfected cells with control-transfected cells vs a control
We studied the effect of cyclin E overexpression in the breast cancer cell line MDA-MB-468, by comparing cyclin E transfected cells with control-transfected cells. The cyclin E/control hybridization was performed twice and cDNA from control transfected cells was used as a reference.
ORGANISM(S): Homo sapiens 
2005-05-31 | E-MEXP-339 | biostudies-arrayexpress
TranscriptomicsGlobal spatial organization of M-NM-3 proteobacterial nucleoids is determined by specific long-range interactions (E. coli)
GCC was used to determine the structure of E. coli grown in LB or treated with SHX. The bacterial genome is highly condensed into a nucleoid structure. Here we present global analyses of the genome spatial organization for two M-NM-3-proteobacteria: Escherichia coli and Pseudomonas aeruginosa by Ge...
ORGANISM(S): Escherichia coli 
2013-05-02 | E-GEOD-40603 | biostudies-arrayexpress
TranscriptomicsElucidation and validation of new targets of the global regulator PdhR in Escherichia coli
The pyruvate dehydrogenase regulator protein (PdhR) of Escherichia coli acts as a transcriptional regulator in a pyruvate dependent manner to control central metabolic fluxes. However, the complete PdhR regulon has not yet been uncovered. To achieve an extended understanding of its gene regulation n...
ORGANISM(S): Escherichia coli 
2011-12-21 | E-GEOD-31333 | biostudies-arrayexpress
TranscriptomicsExpression data from the commensal bacteria Escherchia coli strain HB101 interacting with Caenorhabditis elegans and/or Giardia duodenalis
Homeostatic interactions between the host and its resident microbiota is important for normal physiological functions and if altered, it could lead to dysbiosis, a change in the structure and function of the microbiota, and as a result to various pathophysiologies. Altered structure in bacterial com...
ORGANISM(S): Escherichia coli 
2015-04-02 | E-GEOD-61092 | biostudies-arrayexpress
TranscriptomicsGene expression by E. coli during the production of styrene and when exposed to externally added styrene
Transcriptomic studies of high-cell density fermentations of E. coli producing chemicals of relevance for biotechnology are limited. The aim of this study was to perform fermentations of an E. coli strain that had been engineered to produce styrene and examine the transcriptomic response. This was c...
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2022-03-12 | E-MTAB-8703 | biostudies-arrayexpress
TranscriptomicsE. coli Anaerobic/aerobic transitions in chemostat
Gene-expression measurements were made over a 20 minute time course as steady state E. coli cells were subjected to an anaerobic to aerobic or an aerobic to anaerobic environmental change.
ORGANISM(S): Escherichia coli 
2012-07-17 | E-MTAB-996 | biostudies-arrayexpress
GenomicsE-waste Challenges in India
Impact of E-waste on Mother Nature, humans and animals-
PRJNA221773 | ENA
TranscriptomicsRNA-seq for identifying toxin MazF and MqsR cleavage sites in toxin expression and subsequent recovery cultures of Escherichia coli (mRNA and ncRNA excluding rRNA)
Bacterial toxin-antitoxin systems are thought to help bacteria to reduce their metabolism in various stressful conditions. Many toxins of the bacterial toxin-antitoxin systems are ribonucleases. Such toxins have been mostly viewed as degraders of mRNA, however recently it was demonstrated that they ...
ORGANISM(S): Escherichia coli K-12 
2018-10-11 | E-MTAB-6993 | biostudies-arrayexpress
UnknownThe Importance of Biodiversity E-infrastructures for Megadiverse Countries.
Not available
S-EPMC4512726 | biostudies-literature
UnknownHyperglycemia alters E-NTPDases, ecto-5'-nucleotidase, and ectosolic and cytosolic adenosine deaminase activities and expression from encephala of adult zebrafish (Danio rerio).
Not available
S-EPMC4854841 | biostudies-literature
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