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TranscriptomicsSingle Cell RNA-Seq of Ear Epithelial Cells from i) steady state C57BL6/N & Tcrd-GDL mice, ii) untreated and TPA-treated C57BL6/J mice, and iii) IL13Ra1-knockdown CD1 mice
This dataset contains three experiments, designed for interrogating the effect of DETC on epithelial keratinocytes: Dataset 1) steady state ear epithelial cells (live, CD45-) from C57BL6/N (n=3) and Tcrd-GDL (n=3), after DETC deletion. Dataset 2) untreated and topical TPA-treated ear epithelial ce...
ORGANISM(S): Mus musculus 
2022-12-31 | E-MTAB-10441 | biostudies-arrayexpress
TranscriptomicsInactivation of the GacA response regulator in Pseudomonas fluorescens Pf-5 has far-reaching transcriptomic consequences
The GacS/GacA signal transduction system is a central regulator in Pseudomonas spp., including the biological control strain P. fluorescens Pf-5, in which GacS/GacA controls the production of secondary metabolites and exoenzymes that suppress plant pathogens. A whole genome oligonucleotide microarra...
ORGANISM(S): Pseudomonas fluorescens Pf-5 
2010-03-03 | E-GEOD-16898 | biostudies-arrayexpress
TranscriptomicsscRNA-seq of embryonic skin development (developmental time series in full-thickness dorsal skin of mouse embryos)
In this study, we analysed early embryonic skin development (mus musculus; C57BL/6J) at the transcriptional level. Major questions concerned the cell type composition of early embryonic skin, and the emergence of transcriptional heterogeneity among epithelial and stromal precursor cells. Cells were ...
ORGANISM(S): Mus musculus 
2023-07-16 | E-MTAB-11920 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of male flounder isolated from different rivers
Comparison of environmentally sampled flounder from the Tyne and Alde estuaries, related experiment E-MEXP-15
ORGANISM(S): Platichthys flesus 
2005-01-01 | E-MEXP-14 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of female flounders isolated from different rivers
Comparison of environmentally sampled flounder from the Tyne and Alde estuaries, related experiment, E-MEXP-14
ORGANISM(S): Platichthys flesus 
2006-10-25 | E-MEXP-15 | biostudies-arrayexpress
TranscriptomicsRNA-seq of human prostate cancer cell line with IRF7 knock-down treated with radiation against wild-type control
Abstract/Project overview Tumour recurrence can be influenced by the mutational status of a tumour but also how the tumour responds to therapy. Whilst activation of Type 1 interferon signalling is a hallmark of how cells respond to viral infection, in cancer cells, multiple stresses are known to a...
ORGANISM(S): Homo sapiens 
2023-07-01 | E-MTAB-9286 | biostudies-arrayexpress
TranscriptomicsHigh-throughput sequencing of matched colorectal normal, tumor and metastasis tissues and proof-of principal bioinformatics modeling of therapeutic consequences of miRNA applications
MiRNAs are discussed as diagnostic and therapeutic molecules. However, effective miRNA drug treatments with miRNAs are so far hampered by the complexity of the miRNA networks. To identify potential miRNA drugs in colorectal cancer, we profiled miRNA and mRNA expression in matching normal, tumor and ...
ORGANISM(S): Homo sapiens 
2013-09-18 | E-GEOD-46622 | biostudies-arrayexpress
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