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TranscriptomicsRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Progeny from a cross of Arabidopsis thaliana Landsberg (Ler, Poland) and Kashmir-2 (Kas-2, central Asia) accessions exhibit immune-related hybrid incompatibility (HI) due to a genetic interaction between a cluster of eight TNL (Toll/Interleukin1 Receptor- Nucleotide Binding - Leucine Rich Repeat) RP...
ORGANISM(S): Arabidopsis thaliana 
2018-05-16 | E-MTAB-6755 | biostudies-arrayexpress
GenomicsKAS-seq of OE19 cells
To identify eRNA transcripts in OE19 cells, we performed KAS-seq.
ORGANISM(S): Homo sapiens 
2023-02-24 | E-MTAB-11357 | biostudies-arrayexpress
TranscriptomicsRosette iron deficiency transcript profiling in Arabidopsis thaliana ecotypes Kas-1 and Tsu-1
Iron (Fe) is an essential plant micronutrient, and its deficiency limits plant growth and development on alkaline soils. Under Fe deficiency, plant responses include upregulation of genes involved in Fe uptake from the soil. However, little is known about shoot responses to Fe deficiency. Using m...
ORGANISM(S): Arabidopsis thaliana 
2012-09-30 | E-GEOD-39268 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis Ler/Kas-2 incompatible verses compatible lines
Transcription profiling Ler/Kas-2 incompatible versus compatible lines
ORGANISM(S): Arabidopsis thaliana 
2010-08-19 | E-MEXP-2569 | biostudies-arrayexpress
GenomicsKAS-seq of OE19 cell line
To investigate changes to eRNA transcripts in the presence and the absence of lapatinib in OE19 cells, we performed KAS-seq on OE19 cells treat with 500 nM lapatinib for 1 day.
ORGANISM(S): Homo sapiens 
2024-09-25 | E-MTAB-14095 | biostudies-arrayexpress
TranscriptomicsIdentification of sigB inhibitors in L. monocytogenes
The extensively studied intracellular pathogen, L. monocytogenes, is an ideal model for identifying small-molecule agents for treating bacterial infections. By selecting specific biological targets in L. monocytogenes, which are common to Gram-positive pathogens, we could extrapolate drug discovery ...
ORGANISM(S): Listeria monocytogenes 10403S 
2011-12-06 | E-GEOD-16887 | biostudies-arrayexpress
UnknownRacial Disparities in Pediatric Kidney Transplantation under the New Kidney Allocation System in the United States.
Not available
S-EPMC8729489 | biostudies-literature
UnknownKAS-seq: genome-wide sequencing of single-stranded DNA by N3-kethoxal-assisted labeling.
Not available
S-EPMC8923001 | biostudies-literature
TranscriptomicscRNA hybridizations of Tsu-1 and Kas-1 accessions of Arabidopsis thaliana under well-watered and mild soil drying
These data provide a basis for exploration of gene expression differences between physiologically extreme accessions of Arabidopsis thaliana. Recent studies have documented remarkable genetic variation among Arabidopsis thaliana accessions collected from diverse habitats and across its geographical ...
ORGANISM(S): Arabidopsis thaliana 
2010-02-16 | E-GEOD-20339 | biostudies-arrayexpress
GenomicsTransposase-assisted in situ capture of recombination DSB hotspots (TAID-seq) [KAS-seq]
Transposase-assisted in situ capture of recombination DSB hotspots (TAID-seq) [KAS-seq]
PRJNA1387445 | ENA
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