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TranscriptomicsDNA methylation in peripheral blood from individuals with Crohns' disease or ulcerative colitis and normal controls
Genome wide DNA methylation profiling of Crohn's disease, ulcerative colitis, and normal peripheral blood samples. The Illumina Infinium HumanMethylation450 BeadChip v1.1 was used to obtain DNA methylation profiles across 482,421 CpGs in peripheral blood samples. Samples came from 17 Crohn's disease...
ORGANISM(S): Homo sapiens 
2012-04-04 | E-GEOD-32148 | biostudies-arrayexpress
TranscriptomicsComparison of murine colonic mucosal DNA from postnatal day 90 (P90) to postnatal day 30 (P30) by MSAM
DNA methylation profiling of colonic mucosal DNA between P90 and P30 mice. 0.5ug of DNA was serially digested with SmaI and XmaI followed by an adaptor ligation and adaptor mediated PCR amplification Two independent P90 to P30 comparisons were performed as follows. Samples were labelled with Cy3 (P3...
ORGANISM(S): Mus musculus 
2010-05-22 | E-GEOD-18031 | biostudies-arrayexpress
TranscriptomicsDNA methylation in colon mucosa samples from individuals with Crohns' disease or ulcerative colitis and normal controls
Genome wide DNA methylation profiling of Crohn's disease, ulcerative colitis, and normal colon mucosa samples. The Illumina Infinium HumanMethylation450 BeadChip v1.1 was used to obtain DNA methylation profiles across 482,421 CpGs in colon mucosa samples. Samples came from 9 Crohn's disease affected...
ORGANISM(S): Homo sapiens 
2013-06-01 | E-GEOD-32146 | biostudies-arrayexpress
TranscriptomicsmiRNA data in colon mucosa samples from individuals with ulcerative colitis and normal controls
Genome wide miRNA profiling of ulcerative colitis, and normal colon mucosa samples. The GeneChip miRNA 3.0 Array was used to obtain miRNA profiles across colon mucosa samples. Samples came from 5 ulcerative colitis affected, and 5 normal individuals. miRNA from the 10 samples were hybridized to the ...
ORGANISM(S): Homo sapiens 
2015-01-01 | E-GEOD-43009 | biostudies-arrayexpress
TranscriptomicsComparison of murine colonic mucosal DNA between postnatal day 90 C57BL/6 wild type (WT) and their toll-like receptor 2 knockout (Tlr2-/-) counterparts by methylation specific amplification microarray (MSAM), and whole genomic gene expression profiling
BACKGROUND & AIMS: Toll-like receptor 2 (Tlr2) is important in bacterial pattern recognition and has been recognized as a modifier of intestinal inflammation. In this study we sought to determine the epigenomic, transcriptomic and microbiomic consequences of Tlr2 deficiency in the colonic mucosa of ...
ORGANISM(S): Mus musculus 
2010-07-01 | E-GEOD-21845 | biostudies-arrayexpress
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