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TranscriptomicsMurine skin gene expression analysis of skin-specific Scd1-deficient and control mice
To help elucidate the metabolic changes in the skin that contribute to the obesity resistance and skin pathology in mice lacking Scd1, we performed microarray analysis of skin gene expression in male skin Scd1 knockout (SKO) and Scd1 flox/flox control (Lox) mice fed a standard rodent diet. We identi...
ORGANISM(S): Mus musculus 
2011-05-09 | E-GEOD-24243 | biostudies-arrayexpress
TranscriptomicsTranscription profiling and QTL mapping of 60 mice from an F2 sample segregating for diabetes to generate expression trait correlations and expression quantitative trait locus mapping.
Coordinated regulation of gene expression levels across a series of experimental conditions provides valuable information about the functions of correlated transcripts. To map gene regulatory pathways, we used microarray-derived gene expression measurements in 60 individuals of an F2 sample segregat...
ORGANISM(S): Mus musculus 
2008-06-12 | E-GEOD-3330 | biostudies-arrayexpress
TranscriptomicsCombined Expression Trait Correlations and Expression Quantitative Trait Locus Mapping
Coordinated regulation of gene expression levels across a series of experimental conditions provides valuable information about the functions of correlated transcripts. To map gene regulatory pathways, we used microarray-derived gene expression measurements in 60 individuals of an F2 sample segregat...
ORGANISM(S): Mus musculus 
2005-09-21 | GSE3330 | GEO
TranscriptomicsMicroRNA Target Site Identification by Integrating Sequence and Binding Information
High-throughput sequencing has opened numerous possibilities for the identification of regulatory RNA-binding events. Cross-linking and immunoprecipitation of Argonaute protein members can pinpoint microRNA target sites within tens of bases, but leaves the identity of the microRNA unresolved. A flex...
ORGANISM(S): Homo sapiens 
2013-05-25 | E-GEOD-46611 | biostudies-arrayexpress
UnknownCombined expression trait correlations and expression quantitative trait locus mapping.
Not available
S-EPMC1331977 | biostudies-literature
GenomicsThe Osteoblast to Osteocyte Transition: Epigenetic Changes and Response to the Vitamin D3 Hormone [ChIP-seq]
Osteocytes are derived from osteoblast lineage cells that become progressively embedded in mineralized bone. Development of the osteocytogenic cell line IDG-SW3 has enabled a temporal and mechanistic investigation of this process. Through RNA-seq analyses, we show that while substantial changes in...
ORGANISM(S): Mus musculus 
2014-05-30 | E-GEOD-54782 | biostudies-arrayexpress
TranscriptomicsThe Osteoblast to Osteocyte Transition: Epigenetic Changes and Response to the Vitamin D3 Hormone
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Mus musculus 
2014-05-30 | E-GEOD-54784 | biostudies-arrayexpress
UnknownReproducibility across single-cell RNA-seq protocols for spatial ordering analysis.
Not available
S-EPMC7521718 | biostudies-literature
TranscriptomicsTranscription profiling of human prostate cancer cell line PC3 cells (low in PURa expression) stably over-expressing PUR reveals aPUR alpha protein induces endoplasmic reticulum stress response and cell differentiation pathways in prostate cancer
Following androgen ablation treatment for advanced prostate cancer, almost all men relapse after a period of initial response to therapy, which eventually is life threatening. We have previously found that purine-rich element binding protein, PUR alpha, was significantly repressed in androgen-indepe...
ORGANISM(S): Homo sapiens 
2009-02-07 | E-GEOD-14464 | biostudies-arrayexpress
GenomicsMus musculus
Combined Expression Trait Correlations and Expression Quantitative Trait Locus Mapping
PRJNA93233 | ENA
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