Khan Y Y - OmicsDI

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Unknown (4355)
Proteomics (72)
Transcriptomics (42)
Genomics (13)
Metabolomics (11)
Other (2)
Multiomics (1)

Organisms

Andropogon gerardi (63)
Bacteria (63)
Bartonella quintana JK 31 (63)
Canis lupus familiaris (63)
Clavibacter nebraskensis NCPPB 2581 (63)
Cnidaria (63)
Ensifer adhaerens (63)
Human alphaherpesvirus 1 strain 17 (63)
Human alphaherpesvirus 1 strain KOS (63)
Human betaherpesvirus 5 (63)
Human herpesvirus 2 strain 186 (63)
Mesocricetus auratus (63)
Miscanthus x giganteus (63)
Mus musculus (63)
Panicum virgatum (63)
Mus musculus (19)
Homo sapiens (14)
Gallus gallus (6)
Arabidopsis thaliana (5)
Porphyromonas gingivalis ATCC 33277 (1)
Streptococcus mutans UA159 (1)
Pan troglodytes (1)
Enterococcus faecalis OG1RF (1)
Mycobacterium tuberculosis (1)
Staphylococcus aureus (1)
Plasmodium falciparum (1)
Rattus norvegicus (1)
Danio rerio (1)
Equus asinus x Equus caballus (1)
Saccharum officinarum (1)

Organisms

gut metagenome (1)
Homo sapiens (1)

Repository

pride (63)
biostudies-arrayexpress (47)
MetaboLights (11)
ENA (6)
EGA (4)
iProX (4)
MassIVE (3)
GPMDB (2)

Tissue

Cell culture (14)
Brain (6)
Lung (5)
Whole body (5)
Epithelial cell (4)
B cell (3)
Colon (2)
Endothelial cell (2)
Epithelial cell of lung (2)
Fibroblast (2)
Heart (2)
Kidney (2)
Lens (2)
Plant cell (2)
Adrenal gland (1)
Alveolar sac (1)
B-lymphocyte (1)
Blood plasma (1)
Blood platelet (1)
Blood serum (1)
Breast lobe (1)
Cerebrospinal fluid (1)
Corneal endothelial cell (1)
Cytotoxic T-lymphocyte (1)
Embryonic fibroblast (1)
Embryonic stem cell (1)
Endothelium (1)
Esophagus (1)
HEK-293T cell (1)
T cell (1)

Disease

Disease free (8)
Non-small cell lung carcinoma (3)
Not Available (2)
Lung cancer (2)
Invasive carcinoma (1)
Alveolar rhabdomyosarcoma (1)
Aortic valve stenosis (1)
Brain glioblastoma multiforme (1)
Breast cancer (1)
Cervix carcinoma (1)
Colorectal cancer (1)
Fragile X syndrome (1)
Glioblastoma (1)
Kidney cancer (1)
Neurological dysfunction (1)

Technology Type

Mass Spectrometry (63)
Shotgun proteomics (33)
Bottom-up proteomics (12)
Mass spectrometry (11)
Affinity purification coupled with mass spectrometry proteomics (11)
Data-independent acquisition (6)
Data-dependent acquisition (5)
Gel-based experiment (3)
Top-down proteomics (2)
DiaPASEF (1)
Proteogenomics (1)
SWATH MS (1)

Instrument Platform

Illumina HiSeq 4000 (5)
Q Exactive (3)
Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - reverse phase (3)
NextSeq 500 (2)
Instrument (2)
Illumina HiSeq 2000 (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap Velos (1)
Orbitrap Fusion (1)
6230 TOF LC/MS (Agilent) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2021 (13)
2023 (12)
2010 (12)
2020 (10)
2025 (10)
2026 (10)
2024 (8)
2018 (7)
2022 (6)
2013 (6)
2012 (6)
2015 (5)
2014 (5)
2019 (4)
2016 (3)
2017 (3)
2011 (2)
2009 (2)
2008 (2)
2005 (1)

CHEBI ID

CHEBI:17822 (5)
CHEBI:17126 (5)
CHEBI:16449 (5)
CHEBI:30865 (4)
CHEBI:18186 (4)
CHEBI:26986 (4)
CHEBI:16811 (4)
CHEBI:17748 (4)
CHEBI:25017 (4)
CHEBI:16610 (4)
CHEBI:28044 (4)
CHEBI:15891 (4)
CHEBI:16196 (4)
CHEBI:15698 (4)
CHEBI:78320 (4)
CHEBI:15428 (4)
CHEBI:17562 (4)
CHEBI:22653 (4)
CHEBI:17154 (4)
CHEBI:16919 (4)
CHEBI:27897 (4)
CHEBI:15354 (4)
CHEBI:15756 (4)
CHEBI:60377 (3)
CHEBI:456215 (3)
CHEBI:14321 (3)
CHEBI:35391 (3)
CHEBI:18308 (3)
CHEBI:26271 (3)
CHEBI:28300 (3)

Metabolite Name

AMP (4)
ATP (3)
Spermidine (3)
CMP (3)
CoA-glutathione (2)
Methylglyoxal (2)
Crotetamide (2)
Mannonate (2)
LysoPE(18:0) (2)
Gamma-glutamylcysteine (2)
2-palmitoleoyl-GPC (16:1) (2)
1-stearoyl-2-docosahexaenoyl-GPE (18:0/22:6) (2)
1-palmitoyl-2-docosahexaenoyl-GPE (16:0/22:6) (2)
Leukotriene B4 (2)
Beta-citrylglutamate (2)
Desmosterol (2)
Cytidine triphosphate (2)
Cytidine diphosphate (2)
Cysteinylglycine (2)
(R)-3-hydroxybutyrylcarnitine (2)
1-myristoyl-2-palmitoyl-GPC (14:0/16:0) (2)
Acetylphosphate (2)
S-methylcysteine (2)
Orotidine (2)
Glycerol 3-phosphate (2)
Gamma-glutamyltryptophan (2)
Gamma-glutamylphenylalanine (2)
Gamma-glutamylglutamate (2)
Deoxycarnitine (2)
2-stearoyl-GPE (18:0) (2)

First Public Date

2025 (2)
2017 (2)
2026 (1)
2019 (1)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (18)
Unknown experiment type (4)
Transcription profiling by tiling array (4)
Methylation profiling by array (4)
Transcription profiling by RT-PCR (3)
ATAC-seq (2)
RNA-seq of coding RNA from single cells (2)
RNA-seq of coding RNA (2)
Cell line - High-throughput sequencing (1)
Proteomic profiling by mass spectrometer (1)
Antigen profiling (1)
Comparative genomic hybridization by array (1)
ChIP-seq (1)
DNA-seq (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2022 (643)
2023 (569)
2025 (548)
2021 (539)
2024 (502)
2020 (370)
2019 (238)
2018 (210)
2017 (162)
2016 (137)
2015 (115)
2014 (84)
2026 (67)
2013 (52)
2012 (47)
2011 (39)
2010 (29)
2009 (16)
2008 (12)
2006 (12)
2007 (4)
2004 (2)
2003 (2)
2002 (2)
2005 (1)

Lab affiliation

Department of Chemistry, Imperial College London, Molecular Sciences Research Hub, London, W12 0BZ, UK The Francis Crick Institute, London, NW1 1AT, UK (4)
The Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland 21287 USA (4)
1 The Rosalind Franklin Institute, Oxfordshire, United Kingdom 2 Department of Pharmacology, University of Oxford (1)
1. State Key Laboratory of Genetic Evolution & Animal Models, Key Laboratory of Healthy Aging Research of Yunnan Province, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China 2. University of Chinese Academy of Sciences, Beijing 100101, China 3. KIZ/CUHK Joint Laboratory of Bioresources and Molecular Research in Common Diseases, Kunming 650201, China (1)
Bourne Laboratory, Department of Biological Science, Royal Holloway University of London, Egham, Surrey, TW20 OEX, UK (1)
Bristol Myers Squibb (1)
CSIR-CCMB (1)
CSIR-Institute of Genomics & Integrative Biology, Mathura Road, Delhi 110025, India. (1)
Center for Metabolic Disease Research (CMDR) Lewis Katz School of Medicine at Temple University Medical Education and Research Building, Room 1060 3500 N. Broad Street Philadelphia, PA 19140, USA (1)
Chapman University School of Pharmacy (1)
College of Agriculture and Biology of LCU (1)
College of Life Sciences, Fujian Agriculture and Forestry University (1)
College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China (1)
Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad Nacional Autónoma de México, Ciudad Universitaria, Ciudad de México 04510, Mexico; rgarc@bq.unam.mx (1)
Department of Chemistry, Imperial College London, Molecular Research Science Hub, 80 Wood Lane, London W12 0BZ, United Kingdom. The Francis Crick Institute, 1 Midland Road, London NW1 1AT, United Kingdom. (1)
Department of Human Genetics (1)
Department of Human Genetics University of Chicago (1)
Department of Human Genetics, University of Chicago, Chicago, Illinois, USA; Department of Medicine, University of Chicago, Chicago, Illinois, USA (1)
Department of Oncology, Children’s Hospital Zurich, Steinwiesstrasse 75, 8032 Zurich, Switzerland (1)
Department of Oncology, Cumming School of Medicine, University of Calgary, Calgary, Alberta, Canada (1)
Department of Oncology, Laboratory for Disease mechanisms in cancer, KU Leuven Campus Gasthuisberg O&N1, Herestraat 49 - box 603 3000 Leuven (Belgium) (1)
Department of Pharmacodynamics, College of Pharmacy, University of Florida, Gainesville, FL, USA (1)
Department of Pharmacodynamics, University of Florida (1)
Department of Pharmacology, Northwestern University, Chicago, IL, USA (1)
Department of Pharmacology, Northwestern University, Chicago, IL, USA. (1)
Department of Pharmacy, The University of Tokyo Hospital (1)
Division of Pulmonary and Critical Care Medicine Weill Cornell Medicine (1)
Divisions of Cardiology and Cardiac Surgery, McGill University Health Center, Montreal, Quebec, Canada (1)
Dr. Panjwani Center for Molecular Medicine and Drug Research, International Center for Chemical and Biological Sciences, University of Karachi, Karachi-75270, Pakistan (1)
EDyP (1)