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UnknownRegorafenib for the Treatment of Advanced Gastric Cancer (INTEGRATE): A Multinational Placebo-Controlled Phase II Trial.
Not available
S-EPMC5019744 | biostudies-literature
ProteomicsData-independent acquisition mass spectrometry to quantify protein levels in FFPE tumor biopsies for molecular diagnostics
Mass spectrometry-based protein quantitation is currently used to measure therapeutically relevant protein biomarkers in CAP/CLIA setting to predict likely responses of known therapies. Selected reaction monitoring (SRM) is the method of choice due to its outstanding analytical performance. However,...
ORGANISM(S): Homo Sapiens 
2019-10-22 | PXD010934 | panorama
ProteomicsProteomic and single-cell transcriptomic dissection of human plasmacytoid dendritic cell response to influenza virus
Plasmacytoid dendritic cells [pDCs] represent a rare innate immune subset uniquely endowed with the capacity to produce substantial amounts of type-I interferons [IFN-I]. This function of pDCs is critical for effective antiviral defenses and has been implicated in autoimmunity. While IFN-I and selec...
ORGANISM(S): Human Plasmacytoid Dendritic Cell 
2021-11-12 | MSV000088375 | MassIVE
UnknownLeveraging vaccination-induced protective antibodies to define conserved epitopes on influenza N2 neuraminidase.
Not available
S-EPMC10655865 | biostudies-literature
UnknownSomatic mutation distributions in cancer genomes vary with three-dimensional chromatin structure.
Not available
S-EPMC8350746 | biostudies-literature
UnknownSARS-CoV-2 mRNA vaccination elicits a robust and persistent T follicular helper cell response in humans.
Not available
S-EPMC8695127 | biostudies-literature
Genomicsena-DATASET-TGEN-24-05-2016-20:32:03:406-20 - samples
Paired PCR-free whole genome sequencing data of a matched metastatic melanoma cell line (COLO829) and normal across three lineages and across separate institutions, with independent library preparations, sequencing, and analysis. The data was generated with mean mapped coverages of 99X for COLO829 a...
EGAD00001002142 | EGA
GenomicsDATA-291 - samples
This paper describes the work by Akbari V,. et al. on detection of allele specific methylation using oxford nanopore sequencing data. They have developed set of tools, SNVoter and NanoMethPhase, and workflow which enable the detection of allele specific methylation even in samples with sparse covera...
EGAD00001007920 | EGA
GenomicsA somatic reference standard for cancer genome sequencing with COLO829
Identification of somatic alterations in cancer has become feasible with the massive adoption of next generation sequencing. However, due to variability in sequencing and informatics pipelines, a common somatic reference is needed. We thus performed paired whole genome sequencing of a metastatic mel...
EGAS00001001385 | EGA
GenomicsData Access Committee for COLO829 Somatic reference standard for cancer genome sequencing
Data Access Committee EGAC00001000408
EGAC00001000408 | EGA
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