Kim S-B SB - OmicsDI

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Unknown (708)
Proteomics (22)
Transcriptomics (12)
Genomics (11)
Metabolomics (5)

Organisms

Homo sapiens (22)
Arachis hypogaea (1)
Schizosaccharomyces pombe (1)
Arabidopsis thaliana (1)
Mus musculus (1)
Danio rerio (1)
Sus scrofa domesticus (1)

Repository

PAXDB (15)
biostudies-arrayexpress (13)
EGA (10)
MetaboLights (5)
pride (5)
MassIVE (2)

Tissue

Blood plasma (1)
Brain (1)
Heart (1)

Disease

"hepatocellular adenoma" (1)

Technology Type

Mass Spectrometry (5)
Mass spectrometry (4)
NMR spectroscopy (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Bottom-up proteomics (1)
Data-dependent acquisition (1)
SWATH MS (1)
Shotgun proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - reverse phase (2)
Illumina NovaSeq 6000 (1)
Exactive Plus (1)
Orbitrap Exploris 480 (1)
Bruker (1)
MS Imaging - (1)

Publication Date

2014 (20)
2012 (3)
2023 (3)
2024 (3)
2011 (2)
2010 (2)
2020 (2)
2021 (2)
2025 (1)
2007 (1)
2026 (1)

UNIPROT ID/AC

143BA_DANRE (15)
143BB_DANRE (15)
143G1_DANRE (15)
7955.ENSDARP00000023429 (15)
7955.ENSDARP00000067603 (15)
7955.ENSDARP00000067945 (15)
7955.ENSDARP00000082327 (15)
7955.ENSDARP00000093747 (15)
7955.ENSDARP00000093780 (15)
7955.ENSDARP00000093791 (15)
7955.ENSDARP00000093801 (15)
7955.ENSDARP00000096295 (15)
7955.ENSDARP00000096352 (15)
7955.ENSDARP00000098342 (15)
7955.ENSDARP00000098726 (15)
7955.ENSDARP00000099550 (15)
7955.ENSDARP00000100434 (15)
7955.ENSDARP00000101311 (15)
7955.ENSDARP00000101467 (15)
7955.ENSDARP00000101525 (15)
7955.ENSDARP00000101862 (15)
7955.ENSDARP00000102682 (15)
7955.ENSDARP00000102749 (15)
7955.ENSDARP00000102775 (15)
7955.ENSDARP00000103208 (15)
7955.ENSDARP00000103318 (15)
7955.ENSDARP00000103819 (15)
7955.ENSDARP00000104168 (15)
7955.ENSDARP00000104379 (15)
7955.ENSDARP00000104630 (15)

CHEBI ID

CHEBI:16414 (2)
CHEBI:16870 (2)
CHEBI:16919 (2)
CHEBI:17203 (2)
CHEBI:17368 (2)
CHEBI:17596 (2)
CHEBI:17895 (2)
CHEBI:18050 (2)
CHEBI:10280 (1)
CHEBI:109455 (1)
CHEBI:1148 (1)
CHEBI:116314 (1)
CHEBI:131660 (1)
CHEBI:131692 (1)
CHEBI:131977 (1)
CHEBI:131988 (1)
CHEBI:132004 (1)
CHEBI:132007 (1)
CHEBI:132327 (1)
CHEBI:132557 (1)
CHEBI:132559 (1)
CHEBI:133460 (1)
CHEBI:133599 (1)
CHEBI:134578 (1)
CHEBI:134583 (1)
CHEBI:134585 (1)
CHEBI:134586 (1)
CHEBI:134588 (1)
CHEBI:134589 (1)
CHEBI:134592 (1)

Metabolite Name

Inosine (2)
(-)-pinellic acid (1)
(.+/-.)-Tartaric acid (1)
(1S,3R,5Z,7E,22E)-9,10-Secoergosta-5,7,10,22-tetraene-1,3,25,28-tetrol (1)
(20Z)-17-Oxo-20-hexacosenoic acid (1)
(2S)-1-Hydroxy-3-(pentadecanoyloxy)-2-propanyl (9Z)-9-hexadecenoate (1)
(2S)-3-Hydroxy-2-(octanoyloxy)propyl decanoate (1)
(2xi)-D-gluco-heptonic acid (1)
(3beta,5xi,9xi)-Urs-12-en-3-yl palmitate (1)
(3r,4s)-Tofacitinib (1)
(5xi)-11,12-Dihydroxyabieta-8(14),9(11),12-trien-20-oic acid (1)
.alpha.-Glucoheptitol (1)
1,1'-[1,11-Undecanediylbis(oxy)]dibenzene (1)
1,2-dioleoyl-sn-glycero-3-phospho-(1'-sn-glycerol) (1)
1,2-dioleoyl-sn-glycero-3-phospho-N,N-dimethylethanolamine (1)
1,3-Dihydroxy-2-propanyl (15Z)-15-tetracosenoate (1)
1,3-Dihydroxy-2-propanyl tetracosanoate (1)
1-(9Z-octadecenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) (1)
1-(Decanoyloxy)-3-(octanoyloxy)-2-propanyl tridecanoate (1)
1-Eicosadienoyl-2-docosahexaenoyl-sn-glycero-3-phosphoethanolamine (1)
1-Palmitoyl-2-hydroxy-sn-glycero-3-PE (1)
1-arachidoyl-2-arachidonoyl-sn-glycero-3-phosphate (1)
1-heptadecanoyl-sn-glycero-3-phosphocholine (1)
1-hexadecanoyl-2-(13Z-docosenoyl)-sn-glycero-3-phosphoethanolamine (1)
1-lauroyl-sn-glycerol 3-phosphate (1)
1-myristoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine (1)
1-oleoyl-2-arachidonoyl-sn-glycero-3-phospho-L-serine (1)
1-oleoyl-sn-glycero-3-phosphoethanolamine (1)
1-palmitoyl-2-arachidonoyl-sn-glycero-3-phospho-(1'-sn-glycerol) (1)
1-stearoyl-2-(8Z,11Z,14Z-icosatrienoyl)-sn-glycero-3-phosphoserine (1)

Study type

Transcription profiling by array (8)
Genotyping by array (1)
Comparative genomic hybridization by array (1)
ChIP-seq (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (75)
2023 (72)
2021 (69)
2020 (68)
2024 (66)
2018 (64)
2025 (59)
2015 (40)
2014 (34)
2016 (33)
2017 (32)
2019 (26)
2013 (25)
2012 (15)
2011 (14)
2026 (12)
2009 (7)
2010 (4)
2008 (4)
2007 (1)
2006 (1)

Lab affiliation

Department of Biotechnology, Yonsei University, Republic of Korea (1)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905 (1)
Group for Biometrology, Korea Research Institute of Standards and Science (KRISS), 267 Gajeong-ro, Yuseong-gu, Daejeon 34113, Republic of Korea (1)
UCSF (1)

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Harnessing an RNA-mediated chaperone for the assembly of influenza hemagglutinin in an immunologically relevant conformation.

Not available

S-EPMC5901386 | biostudies-literature

A CREB-mediated increase in miRNA let-7f during prolonged β-agonist exposure: a novel mechanism of β2-adrenergic receptor down-regulation in airway smooth muscle.

Not available

S-EPMC5998966 | biostudies-literature

Differential long-term regulation of TAS2R14 by structurally distinct agonists.

Not available

S-EPMC6902689 | biostudies-literature

Fecal microbiota transplantation can improve cognition in patients with cognitive decline and Clostridioides difficile infection.

Not available

S-EPMC9467396 | biostudies-literature

Diffuse large B-cell lymphoma classification system that associates normal B-cell subset phenotypes with prognosis.

Not available

S-EPMC4397280 | biostudies-literature

Identification of a novel Bromodomain / Casein Kinase II / TAF-containing complex as a regulator of mitotic condensin function

ABSTRACT: Condensin is a central regulator of mitotic genome structure, with mutants showing poorly condensed chromosomes and profound segregation defects. Here we identify the fission yeast NCT complex, comprising the Nrc1 BET-family tandem bromodomain protein (SPAC631.02), Casein Kinase II (CKII) ...

ORGANISM(S): Schizosaccharomyces pombe

2014-01-10 | E-GEOD-53955 | biostudies-arrayexpress

Inhibition of SARS-CoV-2 wild-type (Wuhan-Hu-1) and Delta (B.1.617.2) strains by marine sulfated glycans.

Not available

S-EPMC9487896 | biostudies-literature

Smad4 and Trim33 dependend nodal/activin responsive genes in differentiated mouse ESCs

In differentiated mouse ESCs, most of the nodal/activin responsive genes are dependent on both Smad4 and Trim33, some are solely dependent on Smad4, and some are dependent on Trim33. Ebs at Day2.5 from WT, Smad4 null, and Trim33 knock-down ESCs, were treated with activin or SB 431542 for 2 h.

ORGANISM(S): Mus musculus

2012-01-09 | E-GEOD-32903 | biostudies-arrayexpress

Testosterone-induced matrix metalloproteinase activation is a checkpoint for neuronal addition to the adult songbird brain.

Not available

S-EPMC6671156 | biostudies-literature

Immune response enhancement with GLS-5310 DNA primary vaccine against SARS-CoV-2 followed by administration of an mRNA vaccine heterologous boost.

Not available

S-EPMC10242151 | biostudies-literature