Ko Mi Mi MM - OmicsDI

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Unknown (87)
Proteomics (15)
Transcriptomics (11)
Metabolomics (5)
Genomics (1)

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Mus musculus (14)
Homo sapiens (11)
Drosophila melanogaster (1)

Repository

pride (14)
biostudies-arrayexpress (12)
MetaboLights (5)
MassIVE (1)

Tissue

Cell culture (2)
Colon (2)
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Brain (1)
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Fibroblast (1)
Hepatocyte (1)
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Pluripotent stem cell (1)
Retina (1)
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T cell (1)
Urine (1)
Vitreous humor (1)

Disease

Normal (1)
Brain small vessel disease (1)
Breast cancer (1)
Colon cancer (1)
Hepatocellular carcinoma (1)
Irritable bowel syndrome (1)

Technology Type

Mass Spectrometry (14)
Shotgun proteomics (9)
Mass spectrometry (4)
Bottom-up proteomics (3)
Data-dependent acquisition (3)
Mass spectrometry assay (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
Top-down proteomics (1)

Instrument Platform

Illumina HiSeq 4000 (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
ATAC-seq kit (Catalog No. 53150, Active Motif) (1)
NA (1)
Illumina NovaSeq 6000 (1)
MaXis (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2025 (4)
2010 (4)
2026 (4)
2013 (3)
2023 (3)
2020 (3)
2021 (2)
2019 (2)
2024 (2)
2022 (2)
2011 (1)
2007 (1)
2018 (1)

CHEBI ID

CHEBI:16040 (2)
CHEBI:16113 (2)
CHEBI:16335 (2)
CHEBI:16449 (2)
CHEBI:16708 (2)
CHEBI:28044 (2)
CHEBI:6650 (2)
CHEBI:1148 (1)
CHEBI:116314 (1)
CHEBI:1283 (1)
CHEBI:134206 (1)
CHEBI:134231 (1)
CHEBI:137945 (1)
CHEBI:15349 (1)
CHEBI:15354 (1)
CHEBI:15428 (1)
CHEBI:15603 (1)
CHEBI:15671 (1)
CHEBI:15729 (1)
CHEBI:15741 (1)
CHEBI:15757 (1)
CHEBI:15811 (1)
CHEBI:15824 (1)
CHEBI:15887 (1)
CHEBI:15891 (1)
CHEBI:15901 (1)
CHEBI:15940 (1)
CHEBI:15963 (1)
CHEBI:15971 (1)
CHEBI:16000 (1)

Metabolite Name

Adenine (2)
Adenosine (2)
Cytosine (2)
L-Proline (2)
Phenylalanine (2)
Phosphocholine (2)
(1R,6S)-6-amino-5-oxocyclohexyl-2-ene-1-carboxylic-acid-ester (1)
(4E)-2-Oxohexenoicacid (1)
(7R)-7-(4-Carboxybutanamido)cephalosporanate (1)
(R)-2-Hydroxy-3-phenylpropionic acid (1)
(R)-4-Dehydropantoate (1)
(R)-pantothenic acid (1)
(S)-2-hydroxyglutaric acid (1)
(S)-4-Amino-5-oxopentanoate (1)
(S)-Lactic acid (1)
(S)-methylmalonate semialdehyde (1)
1,5-anhydro-D-mannitol (1)
1-Aminocyclobutanecarboxylic acid (1)
1-Aminocyclopropane-1-carboxylate (1)
1-Methylpyrrolinium (1)
1-Pyrroline (1)
1-Pyrroline-4-hydroxy-2-carboxylate (1)
1-docosene (1)
1-phenylpropane-1_2-dione (1)
2-Aminobutyric acid (1)
2-Aminomethylpyrimidine (1)
2-Hexadecanoylthio-1-ethylphosphorylcholine (1)
2-Hydroxybutyric acid (1)
2-Methyl-1-Pyrroline (1)
2-Methyl-6-oxohepta-2_4-dienal (1)

Modification

Not available (1)

Study type

Transcription profiling by array (7)
RNA-seq of coding RNA (2)
ATAC-seq (1)
Other (1)
ChIP-seq (1)

Release Date

2021 (16)
2024 (10)
2022 (10)
2019 (8)
2023 (8)
2018 (7)
2025 (6)
2013 (6)
2010 (5)
2020 (5)
2015 (4)
2014 (4)
2017 (2)
2016 (2)
2012 (2)
2009 (2)
2011 (1)
2007 (1)

Lab affiliation

Aalborg University (1)
DZNE Munich, Neuroproteomics, Feodor-Lynen Str. 17, 81377 Munich, Germany (1)
Department for Neurodegenerative Science Van Andel Institute Grand Rapids, MI (1)
Department of Biology University of Konstanz Universitätsstrasse 10 78457 Konstanz Germany (1)
Department of Cell and Developmental Biology, Neuroscience Graduate Program, Department of Neurology University of Michigan Medical School, Ann Arbor, MI 48109-2200 (1)
Department of Innovative Technologies in Medicine & Dentistry, University of Chieti, Italy (1)
Department of Microbiology & Immunology, 2the Cancer Center, Medical College of Wisconsin Department of Medicine, Medical College of Wisconsin, Milwaukee, WI (1)
Department of Microbiology and Immunology University of Michigan Medical School, Ann Arbor, MI 48109. (1)
Department of Microbiology and Immunology, Michigan Medicine, University of Michigan, Ann Arbor, MI 48109, USA (1)
Department of Ophthalmology and Visual Science, University of Michigan, Ann Arbor, MI, USA Department of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, USA (1)
Department of Pharmaceutical Sciences, Eugene Applebaum College of Pharmacy and Health Sciences, Wayne State University, 259 Mack Avenue, Detroit, MI 48201, USA (1)
Department of Physiology and Biophysics, University of Illinois at Chicago (1)
Glyco MS Group Copenhagen Center for Glycomics (CCG) Department of Cellular and Molecular Medicine University of Copenhagen (1)
Systematische Proteomics & Bioanalytik - Institut für Experimentelle Medizin Christian-Albrechts-Universität zu Kiel (1)

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Melanopsin (OPN4) is a novel oncogene in cutaneous melanoma: evidence from an experimental study

The goal of this study was to evaluate the role of OPN4 in melanoma development using in vitro, in vivo, and proteomics approaches.

ORGANISM(S): Mus Musculus (ncbitaxon:10090)

2021-12-17 | MSV000088579 | MassIVE

Correlation between the high-frequency content of the QRS on murine surface electrocardiogram and the sympathetic nerves density in left ventricle after myocardial infarction: Experimental study.

Not available

S-EPMC5420473 | biostudies-literature

ATAC-seq of control and Irx3-KO mouse beige ME3 cells on days 0, 1, and 7 of adipogenic differentiation

A map of open chromatin in control and Irx3-KO beige ME3 preadipocytes cells on days 0, 1 and 7 of adipogenic differentiation. Cells were differentiated for indicated number of days, pelleted and snap-frozen in liquid nitrogen. After thawing, cells were treated with DNase to remove exogenous DNA re...

ORGANISM(S): Mus musculus

2025-05-16 | E-MTAB-13525 | biostudies-arrayexpress

Exercise Training Alleviates Cardiac Fibrosis through Increasing Fibroblast Growth Factor 21 and Regulating TGF-β1-Smad2/3-MMP2/9 Signaling in Mice with Myocardial Infarction.

Not available

S-EPMC8623999 | biostudies-literature

Living in Food Deserts and Adverse Cardiovascular Outcomes in Patients With Cardiovascular Disease.

Not available

S-EPMC6405658 | biostudies-literature

Poly (ADP-Ribose) Polymerase 1 Regulates Cajal-Retzius Cell Development and Neural Precursor Cell Adhesion.

Not available

S-EPMC8542860 | biostudies-literature

Attenuated cardiovascular hypertrophy and oxidant generation in response to angiotensin II infusion in glutaredoxin-1 knockout mice.

Not available

S-EPMC2930025 | biostudies-literature

Thymosin β4 Deficiency Exacerbates Renal and Cardiac Injury in Angiotensin-II-Induced Hypertension.

Not available

S-EPMC5945311 | biostudies-literature

TLR2 deficiency leads to increased Th17 infiltrates in experimental brain abscesses.

Not available

S-EPMC2713313 | biostudies-literature

Gene expression profiles of Tet1 knockout (T1KO), Tet2 knockout (T2KO) and Tet1/Tet2 double knockout (DKO) mouse embryonic stem cells.

Global gene expression profile of single and double mutant mouse ES cells were compared to wt ES cells. Two male Tet1 KO, one male Tet2 KO, two male double KO, two female double KO, two male WT and two female WT mouse ES cells were compared. Global gene expression profile of single and double knocko...

ORGANISM(S): Mus musculus

2013-02-01 | E-GEOD-42991 | biostudies-arrayexpress

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119 Results

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