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TranscriptomicsMacrophages recognize the Helicobacter pylori type IV secretion system in the absence of TLR signaling
Helicobacter pylori conquered the world by colonizing the human stomach. There are two major groups of strains, one with and one without a cag pathogenicity island (cagPAI), which result in different clinical outcomes with increased severity in cagPAI+ H. pylori infections such as higher inflammatio...
ORGANISM(S): Mus musculus 
2015-09-01 | E-GEOD-56791 | biostudies-arrayexpress
TranscriptomicsNcRNA profiling after Influenza A/WSN/33 infection I
A growing body of evidence suggests gene regulatory functions for the majority of non-protein-coding RNAs (ncRNAs). Besides small RNAs (sRNAs), the diverse class of long ncRNAs (lncRNAs) recently came into focus of research. So far, the relevance of lncRNAs in infection processes remains elusive. He...
ORGANISM(S): Homo sapiens 
2014-01-29 | E-GEOD-45397 | biostudies-arrayexpress
TranscriptomicsRNA-seq of Arabidopsis response to Tetranychus urticae infestation at altered climate conditions
The Arabidopsis/Tetranychus urticae pair is a model to analyze the response of the plant to the infestation with phytophagous mites. To deep into the effects of environmental conditions on the response of the plant, we compare the transcriptomes of plants grown at standard conditions with plants gro...
ORGANISM(S): Arabidopsis thaliana 
2024-12-14 | E-MTAB-13675 | biostudies-arrayexpress
TranscriptomicsRNA-seq of Arabidopsis response to Tetranychus urticae infestation
The Arabidopsis/Tetranychus urticae pair is a model to analyze the response of the plant to the infestation with phytophagous acari. To deep into the short-term response of the plant, a time series was performed starting upon 30 min of infestation. Additional time points at 1h, 3h and 24h were selec...
ORGANISM(S): Arabidopsis thaliana 
2021-03-16 | E-MTAB-9448 | biostudies-arrayexpress
TranscriptomicsH. pylori infection blocks DNA damage induced apoptosis by T4SS-dependent upregulation of miR-155
The innate immune response against Helicobacter pylori is mainly controlled by pattern recognition receptors that lead to the up-regulation of pro-inflammatory cytokines. A new player in this field is the miR-155 being regulated by TLR ligands in monocytic derived cells influencing certain intracell...
ORGANISM(S): Mus musculus 
2012-04-02 | E-GEOD-29388 | biostudies-arrayexpress
TranscriptomicsNcRNA profiling after Influenza A/WSN/33 infection II
8h and 24h after A/WSN/33 infection (MOI 1) ncRNA profiling was performed A growing body of evidence suggests gene regulatory functions for the majority of non-protein-coding RNAs (ncRNAs). Besides small RNAs (sRNAs), the diverse class of long ncRNAs (lncRNAs) recently came into focus of research. S...
ORGANISM(S): Homo sapiens 
2014-01-29 | E-GEOD-45398 | biostudies-arrayexpress
TranscriptomicsRNA-seq of barley lines after dehydration, spider mite or combined stress.
Drought and herbivores are main threats to crop production. Barley plants were subjected to dehydration, spider mite attack or to a combination of both stresses. RNA-seq analyses were done to know how individual and double abiotic-biotic stresses promote changes in the transcriptome.
ORGANISM(S): Hordeum vulgare subsp. vulgare 
2018-04-30 | E-MTAB-6565 | biostudies-arrayexpress
TranscriptomicsEvidence for a Crucial Role of a Host Non-coding RNA in Influenza A Virus Replication
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Homo sapiens 
2014-01-29 | E-GEOD-45399 | biostudies-arrayexpress
TranscriptomicsHelicobacter pylori induce miR-155 in T cells in a cAMP-Foxp3 dependant manner
The human pathogen Helicobacter pylori (Hp) colonizes the gastric epithelium as a unique niche in the stomach. Infections commonly occur in childhood and persist lifelong, leading in some cases to adenocarcinoma and MALT lymphoma. Several studies define mammalian microRNAs as key regulators of the i...
ORGANISM(S): Mus musculus 
2010-12-22 | E-GEOD-18616 | biostudies-arrayexpress
MetabolomicsThe impact of persistent colonization by Vibrio fischeri on the metabolome of the host squid Euprymna scolopes

Associations between animals and microbes affect not only the immediate tissues where they occur, but also the entire host. Metabolomics, the study of small biomolecules generated during metabolic processes, provides a window into how mutualistic interactions shape host biochemistry. The Hawaiian...

2020-07-02 | MTBLS1186 | MetaboLights
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