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TranscriptomicsHalobacterium salinarum NRC-1 VNG1451C transcription factor ChIP-chip with and without carbon sources
Gene regulatory networks play an important role in coordinating biochemical fluxes through diverse metabolic pathways. The modulation of enzyme levels enables efficient utilization of limited resources as organisms dynamically acclimate to nutritional fluctuations in their environment. Here we hav...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-06 | E-GEOD-13498 | biostudies-arrayexpress
TranscriptomicsHalobacterium NRC-1 ura3 parent strain and VNG1451C deletion mutant in response to growth in rich medium
Gene regulatory networks play an important role in coordinating biochemical fluxes through diverse metabolic pathways. The modulation of enzyme levels enables efficient utilization of limited resources as organisms dynamically acclimate to nutritional fluctuations in their environment. Here we hav...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-06 | E-GEOD-13531 | biostudies-arrayexpress
TranscriptomicsPrevalence of transcription promoters within archaeal operons and coding sequences
This SuperSeries is composed of the following subset Series: GSE12923: Halobacterium salinarum NRC-1 growth curve, tiling arrays. GSE12977: Halobacterium salinarum NRC-1 growth curve GSE13108: Halobacterium salinarum NRC-1 conditional ChIP-chip for transcription initiation factor IIB 4 (TFBd) GSE704...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-17 | E-GEOD-13150 | biostudies-arrayexpress
GenomicsETO Family Protein Mtgr1 Mediates Prdm14 Functions in Stem Cell Maintenance
Prdm14 is a sequence-specific transcriptional regulator of embryonic stem cell (ESC) pluripotency and primordial germ cell (PGC) formation. It exerts its function, at least in part, through repressing genes associated with epigenetic modification and cell differentiation. Here, we show that this rep...
ORGANISM(S): Mus musculus 
2016-07-03 | E-GEOD-74547 | biostudies-arrayexpress
UnknownPrimary Results From the Understanding Outcomes With the S-ICD in Primary Prevention Patients With Low Ejection Fraction (UNTOUCHED) Trial.
Not available
S-EPMC7752215 | biostudies-literature
TranscriptomicsHalobacterium salinarum NRC-1 growth curve, tiling arrays
Experimentally mapped transcriptome structure of H. salinarum NRC-1 by hybridizing total RNA (including RNA species <200 nt) to genome-wide high-density tiling arrays (60 mer probes with 40 nt overlap between contiguous probes). H. salinarum NRC-1 presents a number of interesting switches in metabol...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-17 | E-GEOD-12923 | biostudies-arrayexpress
UnknownMechanism of disease and therapeutic rescue of Dok7 congenital myasthenia.
Not available
S-EPMC8277574 | biostudies-literature
TranscriptomicsHalobacterium salinarum NRC-1 growth curve
Halobacterium salinarum NRC-1 was grown in CM media, at 37oC in a waterbath with agitation of 125 rpm under constant light. Analysis of transcriptional changes during growth, in addition to mapping of transcriptome structure under the same conditions, provided interesting insights about regulatory l...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-17 | E-GEOD-12977 | biostudies-arrayexpress
TranscriptomicsHalobacterium salinarum NRC-1 conditional ChIP-chip for transcription initiation factor IIB 4 (TFBd)
Conditional ChIP-chip for TFBd at different growth stages. cmyc-tagged TFBd was immunoprecipitated at different growth stages (early log, stationary and late stationary phases) and hybridized to microarrays.
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-16 | E-GEOD-13108 | biostudies-arrayexpress
TranscriptomicsRole of σ54 in the regulation of genes involved in biogenesis of type I and type IV pili in Xylella fastidiosa
The phytopathogen Xylella fastidiosa produces two classes of pili, long type IV pili and short type I pili, which are involved in motility and adhesion. In this work, we have investigated the role of σ54 factor and its involvement in the regulation of fimbrial biogenesis in X. fastidiosa. An rpoN n...
ORGANISM(S): Xylella fastidiosa 
2010-06-25 | E-GEOD-8097 | biostudies-arrayexpress
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