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TranscriptomicsWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
The Arabidopsis thaliana mutant wrky33 is highly susceptible to the necrotrophic fungus Botrytis cinerea. Comparing the expression profiles of B. cinerea-infected wrky33 and WT plants we identified 2765 differentially expressed genes dependent on WRKY33, of which 1675 were up-regulated in the mutant...
ORGANISM(S): Arabidopsis thaliana 
2015-06-15 | E-GEOD-66290 | biostudies-arrayexpress
TranscriptomicsTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
We report that an intracellular NLR immune receptor from monocotyledonous barley is fully functional in dicotyledonous Arabidopsis thaliana. In contrast to common belief in plant NLR biology, this implies ~150 million years of evolutionary conservation of the underlying immune mechanism. This also s...
ORGANISM(S): Arabidopsis thaliana 
2012-11-22 | E-GEOD-39463 | biostudies-arrayexpress
TranscriptomicsTime course RNA-seq analysis of barley powdery mildew fungus Bgh infecting immunocompromised Arabidopsis thaliana
RNA-seq experiments detected fungal expression patterns during infection of immunocompromised Arabidopsis thaliana 3 biological replicates per condition. Arabidopsis plants without (pps) or with (B12) the MLA1-HA construct in pen2 pad4 sag101 background were challenged with either Bgh isolate K1 ex...
ORGANISM(S): Blumeria graminis f. sp. hordei 
2013-05-27 | E-GEOD-43163 | biostudies-arrayexpress
TranscriptomicsAnalysis of WRKY33 binding sites and WRKY33-dependent gene expression in Arabidopsis thaliana upon Botrytis cinerea 2100 inoculation
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Arabidopsis thaliana 
2015-06-15 | E-GEOD-66300 | biostudies-arrayexpress
GenomicsWRKY33 binding sites in Arabidopsis upon Botrytis cinerea 2100 inoculation
The Arabidopsis thaliana mutant wrky33 is highly susceptible to the necrotrophic fungus Botrytis cinerea. We identified by ChIP-seq >1680 high-confidence WRKY33 binding sites associated with 1576 genes within the Arabidopsis genome, with all of them being dependent on rapid activation of WRKY33 expr...
ORGANISM(S): Arabidopsis thaliana 
2015-06-15 | E-GEOD-66289 | biostudies-arrayexpress
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