Krause R R - OmicsDI

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Unknown (1055)
Transcriptomics (49)
Proteomics (40)
Metabolomics (5)
Genomics (2)

Organisms

Homo sapiens (38)
Mus musculus (28)
Caenorhabditis elegans (3)
Drosophila melanogaster (3)
Sus scrofa domesticus (3)
Corynebacterium glutamicum (2)
Escherichia coli (2)
Chlamydomonas reinhardtii (1)
Corynebacterium glutamicum ATCC 13032 (1)
Sus scrofa (1)
Anaerostipes caccae L1-92 (1)
Bacteroides thetaiotaomicron VPI-5482 (1)
Bifidobacterium longum NCC2705 (1)
Blautia producta ATCC 27340 = DSM 2950 (1)
Bos taurus (1)
Clostridium butyricum DSM 10702 (1)
Haloferax volcanii (1)
Lactiplantibacillus plantarum subsp. plantarum (1)
Myotis lucifugus (1)
Saccharomyces cerevisiae (1)
Schizophyllum commune H4-8 (1)
Streptococcus pyogenes M1 GAS (1)
Thomasclavelia ramosa DSM 1402 (1)

Repository

biostudies-arrayexpress (51)
pride (38)
MetaboLights (5)
MassIVE (2)
EGA (1)

Tissue

Cell culture (6)
Bone marrow (3)
T cell (3)
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Adipose tissue (1)
Biceps femoris (1)
Blood cell (1)
Cell suspension culture (1)
Colon (1)
Epithelial cell (1)
Heart (1)
Leukocyte (1)
Multipotent stem cell (1)
Spleen (1)
Stem cell (1)

Disease

Acute leukemia (3)
Duchenne muscular dystrophy (3)
Osteosarcoma (2)
Lymphoma (1)
Breast cancer (1)
Colon cancer (1)
Disease free (1)
Prostate cancer (1)

Technology Type

Mass Spectrometry (38)
Shotgun proteomics (19)
Bottom-up proteomics (7)
Data-dependent acquisition (6)
Mass spectrometry (5)
Gel-based experiment (5)
Affinity purification coupled with mass spectrometry proteomics (3)
Data-independent acquisition (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)

Instrument Platform

ScanArray Express HT [PerkinElmer] (3)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - positive - reverse phase (2)
LTQ Orbitrap (1)
Orbitrap Fusion (1)
6540 Q-TOF LC/MS (Agilent) (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2015 (16)
2020 (8)
2014 (7)
2023 (7)
2016 (6)
2013 (6)
2025 (6)
2012 (5)
2008 (5)
2019 (5)
2021 (5)
2026 (5)
2022 (4)
2017 (2)
2010 (2)
2009 (2)
2007 (2)
2018 (2)
2024 (1)

CHEBI ID

CHEBI:15428 (2)
CHEBI:15741 (2)
CHEBI:15756 (2)
CHEBI:15978 (2)
CHEBI:16010 (2)
CHEBI:16449 (2)
CHEBI:16995 (2)
CHEBI:17268 (2)
CHEBI:17490 (2)
CHEBI:17754 (2)
CHEBI:17822 (2)
CHEBI:18186 (2)
CHEBI:22653 (2)
CHEBI:25017 (2)
CHEBI:27266 (2)
CHEBI:27897 (2)
CHEBI:28044 (2)
CHEBI:28300 (2)
CHEBI:28842 (2)
CHEBI:30769 (2)
CHEBI:6650 (2)
CHEBI:116314 (1)
CHEBI:131886 (1)
CHEBI:131887 (1)
CHEBI:132968 (1)
CHEBI:1372 (1)
CHEBI:138126 (1)
CHEBI:139305 (1)
CHEBI:142245 (1)
CHEBI:144043 (1)

Metabolite Name

Alanine (2)
Asparagine (2)
Glutamine (2)
Glycerol (2)
Glycine (2)
Isoleucine (2)
Leucine (2)
Oxalic acid (2)
Phenylalanine (2)
Phosphate (2)
Serine (2)
Succinic acid (2)
Threonine (2)
Tryptophan (2)
Tyrosine (2)
Valine (2)
1-dimethylisopropylsilyloxy-3-methylbut-2-ene (1)
1-monolinoelylpalmitin (1)
1-monopalmitin (1)
13-(Z)-Docosenamide (1)
2,4-dihydroxybutyric acid (1)
2-Oxoadipate (1)
2-adipic acid (1)
2-hydroxyisocaproic_acid (1)
2-keto-l-gluconic_acid (1)
2-ketoisovaleric acid (1)
2-methoxyhydroquinone (1)
2-methylbutyric acid (1)
3-Methyl-2-oxovaleric acid (1)
3-O-caffeoyl-quinic acid (1)

Study type

Transcription profiling by array (43)
RNA-seq of coding RNA (3)
Comparative genomic hybridization by array (1)
Other (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2021 (135)
2022 (117)
2024 (111)
2023 (101)
2025 (90)
2020 (84)
2019 (63)
2015 (58)
2018 (57)
2016 (55)
2017 (35)
2013 (34)
2014 (32)
2012 (26)
2011 (24)
2026 (23)
2010 (13)
2009 (12)
2008 (11)
2007 (6)
2000 (5)
2006 (4)
2004 (3)
2005 (2)
2003 (2)
1999 (2)
2002 (1)

Lab affiliation

Goethe-Universität Frankfurt, Georg-Speyer-Haus, Paul-Ehrlich-Str. 42-44, Frankfurt am Main, GERMANY (3)
Institute of Pharmaceutical Chemistry, Goethe University, Max-von-Laue-Str. 9, 60438 Frankfurt am Main, Germany Structural Genomics Consortium (SGC), Buchmann Institute for Life Sciences, Max-von-Laue-Str. 15, 60438 Frankfurt am Main, Germany German Cancer Consortium (DKTK) Mainz/Frankfurt, German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany (3)
Department Molecular Toxicology, Helmholtz Centre for Environmental Research GmBH - UFZ (2)
Department of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto (2)
1Institute of Biochemistry II, Faculty of Medicine, Goethe University, Frankfurt am Main, Germany 2Frankfurt Cancer Institute, Frankfurt am Main, Germany 3Cardio-Pulmonary Institute, Frankfurt am Main, Germany (1)
Biomedical Center Munich Molecular Biology Großhaderner Strasse 9 82152 Planegg-Martinsried Phone: (089) 2180 71602 (1)
Brandenburg University of Technology Cottbus-Senftenberg (1)
Center for Translational Research and Molecular Biology of Cancer, Maria Sklodowska-Curie National Research Institute of Oncology Gliwice Branch, Gliwice, Poland (1)
Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Institute of Pharmacology, 10115 Berlin, Germany (1)
Department of Cellular Molecular Pharmacology, University of California San Francisco, 1700 4th Street, San Francisco, CA 94158 (1)
Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute Jena, Germany (1)
Department of Molecular and Cellular Medicine, Institute for Regenerative Medicine, Texas A&M Health Science Center, College Station, TX, 77843, USA. (1)
Department of Redox Metabolism, Institute of Biochemistry, University of Cologne, Cologne, Germany (1)
Dr. Thomas Fröhlich Laboratory for Functional Genome Analysis Gene Center Munich Ludwig-Maximilians-Universität Munich (LMU) Feodor-Lynen-Str. 25 D-81377 München (1)
ETH Zürich Institute of Molecular Systems Biology Otto-Stern-Weg 3 8093 Zürich Switzerland (1)
Group Leader, Quattrocolo Lab, Kavli Institute for Systems Neuroscience and Centre for Neural Computation, Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway (1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15 04318 Leipzig, Germany (1)
Insitute for Cardiovascular Physiology, Goethe University, Frankfurt, Germany (1)
Institute for Systems Biology (1)
Instiute for Microbiology (1)
Laboratory for Functional Genome Analysis Genzentrum Ludwig-Maximilians-Universität München Feodor-Lynen-Str. 25 D-81377 München Germany (1)
Leibniz Institute for Zoo and Wildlife Research (1)
Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP) (1)
Leibniz-Forschungsinstitut für Molekulare Pharmakologie, Department of Chemical Biology, Mass Spectrometry (1)
Ludwig-Maximilians-Universität München Genzentrum Laboratory for Functional Genome Analysis Feodor-Lynen-Str. 25 D-81377 München (1)
Max Planck Institute of Biochemistry Proteomics and Signal Transduction Am Klopferspitz 18 82152 Martinsried Germanry (1)
Max Planck Unit for the Science of Pathogens, D-10117 Berlin, Germany Institute for Biology, Humboldt University, D-10115 Berlin, Germany (1)
Molecular Biology Division, Biomedical Center, Ludwig-Maximilians-University, Munich, Germany (1)
Prof. Dr. Henning Urlaub Max-Planck-Institute for Biophysical Chemistry Bioanalytical Mass Spectrometry Group Am Fassberg 11 D-37077 Goettingen, Germany University Medical Center Goettingen Bioanalytics Institute for Clinical Chemistry Robert Koch Strasse 40 D-37075 Goettingen, Germany (1)
SMBP, ESPCI Paris PSL/CNRS (1)

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Funding global health product R&D: the Portfolio-To-Impact Model (P2I), a new tool for modelling the impact of different research portfolios.

Not available

S-EPMC6139376 | biostudies-literature

Associations between self-reported upper limb motor ability, life satisfaction and life problems in people with cervical spinal cord injury from the community in the United States: a cross-sectional study.

Not available

S-EPMC12927376 | biostudies-literature

Transcription profiling time series of mouse melanocytes transfected with an inducible version of the oncogenic receptor Xmrk, starved for 72 h and afterwards stimulated with EGF

Signaling pathways specifically induced by the oncogenic receptor Xmrk can be elucidated by comparing gene expression in cells with the activated receptor to gene expression in cells with the non-activated receptor. Mouse melanocytes transfected with an inducible version of the oncogenic receptor Xm...

ORGANISM(S): Mus musculus

2008-08-31 | E-MEXP-1311 | biostudies-arrayexpress

Phase coexistence in the fully heterogeneous Hegselmann–Krause opinion dynamics model

Not available

S-EPMC10761677 | biostudies-literature

Proteomics of MSC-derived exosomes upon Plekhm1-KO

Leukemia cells instruct their surrounding bone marrow microenvironment (BMM) rendering it hospitable to leukemia cell survival. Conversely, how cells of the BMM influence leukemia progression is less well understood. Pleckstrin homology domain family M member 1 (PLEKHM1) serves as a hub between fusi...

ORGANISM(S): Mus musculus (Mouse)

2023-01-16 | PXD027041 | Pride

proteomic analysis of leukocytes upon Plekhm1-KO

ORGANISM(S): Mus musculus (Mouse)

2023-01-16 | PXD027044 | Pride

Sps-ms3 Tmt Mesenchymal stromal cells Mouse Orbitrap lumos

Engineering Corynebacterium glutamicum for fast production of lysine and pipecolic acid

The Gram-positive soil bacterium Corynebacterium glutamicum is widely used in industrial fermentative processes for the production of amino acids. The world production of L-lysine has surpassed 2 million tons per year. Glucose is taken up into the C. glutamicum cell by the phosphotransferase system ...

ORGANISM(S): Corynebacterium glutamicum

2016-03-30 | E-GEOD-79690 | biostudies-arrayexpress

Proteome analysis of AML cells upon CaSR-KO

Haematopoietic stem cells (HSC) reside in locations within the bone marrow microenvironment (BMM) featuring a slightly higher extracellular calcium ion concentration [eCa2+]. HSC respond to [eCa2+] via the G-protein coupled calcium-sensing receptor (CaSR), but the role of CaSR for leukaemia and leuk...

ORGANISM(S): Mus musculus (Mouse)

2023-10-24 | PXD035937 | Pride

Mouse Tmt Proteome Aml

Gene expression polymorphism underpins evasion of host immunity in an asexual lineage of the Irish potato famine pathogen.

Not available

S-EPMC6032779 | biostudies-literature

Proline-rich sequence recognition: II. Proteomics analysis of Tsg101 ubiquitin-E2-like variant (UEV) interactions.

Not available

S-EPMC2773715 | biostudies-literature

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1152 Results

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