Lai Chen C - OmicsDI

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Unknown (1964)
Transcriptomics (42)
Proteomics (40)
Genomics (24)
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Multiomics (1)

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Homo sapiens (53)
Mus musculus (21)
Caenorhabditis elegans (14)
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Helicobacter pylori 26695 (2)
Arabidopsis thaliana (2)
Escherichia coli (2)
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Gallus gallus (1)
Acinetobacter baumannii AB_TG2631 (1)
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Triplophysa siluroides (1)

Repository

biostudies-arrayexpress (61)
pride (25)
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Disease

Acute kidney tubular necrosis (2)
Not Available (1)
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COVID-19 (1)
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Hepatocellular carcinoma (1)
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Vascular dementia (1)

Technology Type

Mass Spectrometry (25)
Shotgun proteomics (12)
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Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (5)
Illumina HiSeq 2000 (4)
LTQ Orbitrap Elite (2)
Gas Chromatography MS - (2)
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Instrument (1)
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Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2011 (15)
2025 (13)
2012 (11)
2014 (9)
2013 (9)
2015 (8)
2021 (8)
2023 (7)
2022 (6)
2010 (5)
2026 (5)
2024 (5)
2020 (4)
2016 (3)
2018 (3)
2005 (2)
2019 (2)
2008 (1)
2017 (1)

CHEBI ID

CHEBI:15741 (5)
CHEBI:16704 (5)
CHEBI:18186 (5)
CHEBI:18237 (5)
CHEBI:25094 (5)
CHEBI:26271 (5)
CHEBI:27897 (5)
CHEBI:30769 (5)
CHEBI:32816 (5)
CHEBI:15428 (4)
CHEBI:15676 (4)
CHEBI:15891 (4)
CHEBI:16335 (4)
CHEBI:16359 (4)
CHEBI:16449 (4)
CHEBI:16737 (4)
CHEBI:16919 (4)
CHEBI:17154 (4)
CHEBI:17234 (4)
CHEBI:17368 (4)
CHEBI:17562 (4)
CHEBI:17568 (4)
CHEBI:17596 (4)
CHEBI:18257 (4)
CHEBI:22660 (4)
CHEBI:25017 (4)
CHEBI:26986 (4)
CHEBI:27266 (4)
CHEBI:28044 (4)
CHEBI:28300 (4)

Metabolite Name

Glutamine (5)
Lysine (5)
Tyrosine (5)
Alanine (4)
Creatine (4)
Cytidine (4)
Proline (4)
Succinic acid (4)
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Galactose (3)
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Inosine (3)
Lactic acid (3)
Methionine (3)
Ornithine (3)
Phenylalanine (3)
Sn-Glycero-3-phosphocholine (3)
Trigonelline (3)
Valine (3)
(-)-Shikimic acid (2)
1-Methylnicotinamide (2)
2-Hydroxyisocaproic acid (2)
3,4-Dihydroxyphenylglycol (2)
3-Hydroxyanthranilic acid (2)
3-Methyl-2-oxovaleric acid (2)

IsPrivate

False (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (21)
ChIP-seq (17)
RNA-seq of coding RNA (7)
Comparative genomic hybridization by array (5)
Methylation profiling by array (5)
Unknown experiment type (2)
Methylation profiling by high throughput sequencing (2)
ChIP-chip by tiling array (1)
Other (1)

Release Date

2025 (294)
2023 (243)
2022 (241)
2024 (235)
2021 (222)
2020 (155)
2018 (113)
2019 (88)
2017 (83)
2015 (72)
2016 (50)
2026 (50)
2013 (40)
2014 (39)
2012 (29)
2011 (28)
2010 (16)
2008 (8)
2005 (5)
2009 (5)
2006 (2)
2004 (2)
2007 (1)
2003 (1)
2002 (1)
2001 (1)
2000 (1)

Lab affiliation

Institute of Clinical Medicine in National Yang-Ming Chiao Tung University, Taiwan (Muh-Hwa Yang Lab) (3)
Department of Urology, Zhongshan Hospital (Xiamen), Fudan University, Xiamen, China (2)
1. Nephrology Department of Guilin No. 924 Hospital, Guangxi Key laboratory of Metabolic Diseases Research, Guilin Key laboratory of Kidney Diseases Research, 541002, Guilin, Guangxi, People’s Republic of China. 2. Clinical Medical Research Center, the Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital), 518020, Shenzhen, Guangdong, People’s Republic of China. (1)
Chang Gung Memorial Hospital (1)
Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA (1)
Department of Life Science,National Taiwan University, Taipei, Taiwan (1)
Department of Microbiology, Anatomy, Physiology and Pharmacology, School of Agriculture, Biomedicine and Environment, La Trobe University, Melbourne, Australia. La Trobe Institute for Molecular Science, La Trobe University, Melbourne, Australia. (1)
Department of Microbiology, The University of Hong Kong, Hong Kong, SAR, China (1)
Director (1)
Fisheries Research Institute, Sichuan Academy of Agricultural Sciences (Sichuan Fisheries Research Institute), Chengdu 611731, Sichuan, China (1)
Fudan University (1)
Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei, Taiwan Chemical Biology and Molecular Biophysics Program, Taiwan International Graduate Program, Academia Sinica, Taipei, Taiwan Genome and Systems Biology Degree Program, National Taiwan University and Academia Sinica, Taipei, Taiwan. (1)
Institute of Atomic and Molecular Sciences, Academia Sinica, Taiwan (1)
Institute of Biological Chemistry, Academia Sinica (1)
Institute of Plant and Microbial Biology, Academia Sinica (1)
National Center for Protein Sciences (The PHOENIX center, Beijing) (1)
National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, China (1)
National Taiwan Ocean University (1)
Professor, School of Life Sciences, The Chinese University of Hong Kong Director, Centre for Protein Science and Crystallography Assistant Dean (Student Affairs), Faculty of Sciences Fellow, Shaw College (1)
State Key Laboratory of Membrane Biology, Institute of Zoology, Chinese Academy of Sciences (1)
The Hong Kong University of Science and Technology (1)
The first affiliated hospital of Sun Yat-sen University (1)

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The complete chloroplast genome and phylogenetic analysis of Bauhinia glauca subsp. hupehana (Craib) T. C. Chen 1988.

Not available

S-EPMC10930098 | biostudies-literature

Exogenous L-Alanine promotes phagocytosis multidrug-resistant bacterial pathogens (V. parahaemolyticus-infected spleen metabolomics)

Multidrug-resistant bacteria present a major threat to public health. Therefore, new drugs or approaches are urgently needed to manage and mitigate this threat. Here, we screen the molecular candidates that allow the survival of mice upon Vibrio parahaemolyticus infection by integrated p...

2024-09-26 | MTBLS7996 | MetaboLights

Astrocyte elevated gene-1 (AEG-1) and c-Myc cooperate to promote hepatocarcinogenesis

Double transgenic mice with hepatocyte-specific expression of AEG-1 and c-Myc show aggressive HCC compared to single transgenics. Gene expression was analyzed to understand the molecular mechanism by which AEG-1 and c-Myc cooperate to promote hepatocarcinogenesis. Livers were collected from naïve ad...

ORGANISM(S): Mus musculus

2014-09-30 | E-GEOD-61875 | biostudies-arrayexpress

Transcription profiling of human liver cancer samples

Experiments used in Figure one of the HCC paper by Chen X, et al.

ORGANISM(S): Homo sapiens

2008-03-12 | E-SMDB-1164 | biostudies-arrayexpress

Microseismic energy distribution and impact risk analysis of complex heterogeneous spatial evolution of extra-thick layered strata.

Not available

S-EPMC9237134 | biostudies-literature

C-Myb+ erythro-myeloid progenitor-derived fetal monocytes give rise to adult tissue-resident macrophages

Although classified as hematopoietic cells, tissue-resident macrophages are selfrenewing and maintained independently of adult hematopoiesis. While most macrophages originate from embryonic precursors that seed tissues prior to birth, their exact origin is unknown. Using an in utero macrophage deple...

ORGANISM(S): Mus musculus

2015-04-23 | E-GEOD-66970 | biostudies-arrayexpress

A proteomic landscape of diffuse-type gastric cancer

Here we present a dataset from 84 DGC patients with paired tumor and nearby tissue. Tumors and their nearby tissues were evaluated by pathologists. Nearby tissues were designated as non-cancerous and were greater than 5 cm away from the surgery margin. Hematoxylin and eosin (H&E) stained sections we...

ORGANISM(S): Homo sapiens (Human)

2018-02-09 | PXD008840 | Pride

Gastric cancer Proteome

Integrated microbiome-metabolome-genome axis data of Laiwu and Lulai pigs

Excessive fat deposition can trigger metabolic diseases, and it is crucial to identify factors that can break the link between fat deposition and metabolic diseases. Healthy obese Laiwu pigs (LW) are high in fat content but resistant to metabolic diseases. In this study, we compared the fecal microb...

2023-04-20 | MTBLS3977 | MetaboLights

Down-regulation of ATF1 leads to early neuroectoderm differentiation of human embryonic stem cells by increasing the expression level of SOX2.

Not available

S-EPMC6704446 | biostudies-literature

Gene expression patterns in human liver cancers

All the array experiments published in "Gene expression patterns in human liver cancers" by Chen X, et al. Hepatocellular carcinoma (HCC) is a leading cause of death worldwide. Using cDNA microarrays to characterize patterns of gene expression in HCC, we found consistent differences between the expr...

ORGANISM(S): Homo sapiens

2005-10-25 | E-GEOD-3500 | biostudies-arrayexpress

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