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TranscriptomicsExpression profiling of normal lung parenchyma
2 normal lung parenchyma SAGE libraries, generated from 2 pools of 4 individuals each Discussed in the study: IDENTIFICATION OF NOVEL LUNG GENES IN BRONCHIAL EPITHELIUM BY SERIAL ANALYSIS OF GENE EXPRESSION Kim M. Lonergan1, Raj Chari1, Ronald J. deLeeuw1, Ashleen Shadeo1, Bryan Chi1, Ming-Sound T...
ORGANISM(S): Homo sapiens 
2006-11-20 | E-GEOD-3708 | biostudies-arrayexpress
TranscriptomicsCervical Tissue Long SAGE
16 Long SAGE libraries Keywords: Various degrees of cervical dysplasia Normal Cervical Tissue (N1, N2, N3, N4) CIN III, severe dysplasia cervical tissue (C1, C2, C3, C4, C5, C6) CIN I, mild dysplasia, cervical tissue (M1, M2, M3) CIN II, moderate dysplasia, cervical tissue (M4, M5, M6)
ORGANISM(S): Homo sapiens 
2008-02-18 | E-GEOD-7433 | biostudies-arrayexpress
TranscriptomicsOral dysplasias and oral squamous cell carcinoma
Analysis of DNA from 94 oral lesions by whole genome tiling-path array comparative genomic hybridization. Keywords: array comparative genomic hybridization Whole genome tiling-path array CGH profiles of 94 formalin-fixed paraffin-embedded oral specimens.
ORGANISM(S): Homo sapiens 
2008-12-30 | E-GEOD-9193 | biostudies-arrayexpress
TranscriptomicsDNA Methylation is Globally Disrupted and Associated with Expression Changes in COPD Small Airways
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Homo sapiens 
2014-03-28 | E-GEOD-56342 | biostudies-arrayexpress
TranscriptomicsGene expression profiles of COPD and nonCOPD small airway epithelia
Gene expression profiles in this submission were part of an integrative DNA methylation and gene expression integrative study. The goal of this study was to determine whether DNA methylation patterns were disrupted in small airway epithelia of patients with Chronic Obstructive Pulmonary Disease (COP...
ORGANISM(S): Homo sapiens 
2014-03-28 | E-GEOD-56341 | biostudies-arrayexpress
TranscriptomicsMethylation profiles of COPD small airways
Rationale: DNA methylation is an epigenetic modification that is highly disrupted in response to cigarette smoke and involved in a wide spectrum of malignant and non-malignant diseases, but surprisingly not previously assessed in small airways of patients with chronic obstructive pulmonary disease (...
ORGANISM(S): Homo sapiens 
2014-02-28 | E-GEOD-55454 | biostudies-arrayexpress
TranscriptomicsComprehensive Serial Analysis of Gene Expression of the Cervical Epithelium Transcriptome
In this study, we sequenced 691,390 SAGE tags from four libraries. Cervical L-SAGE libraries N1, N2, C1, and C2 were sequenced to 165,624, 181,224, 173,534, and 171,008 tags, respectively. Duplicate ditags were eliminated from analysis resulting in 136,276, 139,656, 154,828 and 136,386 useful tags...
ORGANISM(S): Homo sapiens 
2008-02-18 | E-GEOD-6252 | biostudies-arrayexpress
UnknownSuppression of Slit3 induces tumor proliferation and chemoresistance in hepatocellular carcinoma through activation of GSK3β/β-catenin pathway.
Not available
S-EPMC5984734 | biostudies-literature
TranscriptomicsTiling-set aCGH data for oral dysplasias and oral squamous cell carcinomas
Analysis of DNA from 89 oral lesions by whole genome tiling-path array comparative genomic hybridization. Keywords: array comparative genomic hybridization Genomic DNA isolated from 89 formalin-fixed paraffin-embedded oral dysplasias and tumors, then profiled by whole genome tiling-path array CGH to...
ORGANISM(S): Homo sapiens 
2009-07-01 | E-GEOD-11275 | biostudies-arrayexpress
TranscriptomicsCpG island methylation
We compare the methylation status of CpG island clones by MeDIP in SW48 colon cancer cells relative to normal colon mucosa and WI38 primary fibroblasts.
ORGANISM(S): Homo sapiens 
2010-06-09 | E-GEOD-2653 | biostudies-arrayexpress
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