Lamp-1 - OmicsDI

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Unknown (1135)
Transcriptomics (164)
Proteomics (95)
Genomics (41)
Metabolomics (5)
Other (3)
Genomic (2)
Clinical (2)
Multiomics (2)

Organisms

Homo sapiens (87)
Mus musculus (29)
Arabidopsis thaliana (11)
Saccharomyces cerevisiae (8)
Mytilus galloprovincialis (7)
Macaca mulatta (5)
Hordeum vulgare (4)
Rattus norvegicus (3)
Vitis vinifera (2)
Solanum tuberosum (2)
Ovis aries (2)
Caenorhabditis elegans (2)
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Selaginella kraussiana (1)
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Organisms

Homo sapiens (9)
Mus musculus (9)
Arabidopsis thaliana (2)
Ixodes ricinus (1)

Repository

biostudies-arrayexpress (158)
pride (69)
ENA (26)
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geo (13)
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dbGaP (2)
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Tissue

Cell culture (19)
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Brain (2)
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Blood (1)
Blood cell (1)
Blood serum (1)
Breast adenocarcinoma cell line (1)
Breast epithelium (1)
Bursa copulatrix (1)
Epithelium of pancreatic duct (1)
Female reproductive gland (1)
Female reproductive system (1)
Heart (1)
Ileum (1)
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Liver (1)
Medulloblastoma cell (1)
Oviductal fluid (1)
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Prefrontal cortex (1)
Seedling (1)
Seminal plasma (1)
Spermatheca (1)
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Disease

Parkinson's disease (4)
Normal (3)
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Blumeria graminis hordei (powdery mildew) inoculation (1)
Osteosarcoma (1)
Colon cancer (1)
Primary open-angle glaucoma (1)
Colon cancer (1)
Not Available (1)
Acute leukemia (1)
Breast cancer (1)
COVID-19 (1)
Childhood medulloblastoma (1)
Neurotrophic keratoconjunctivitis (1)
Pancreatic ductal adenocarcinoma (1)
Respiratory syncytial virus infectious disease (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (69)
Shotgun proteomics (36)
Bottom-up proteomics (13)
Chemical cross-linking coupled with mass spectrometry proteomics (12)
Data-dependent acquisition (8)
Affinity purification coupled with mass spectrometry proteomics (7)
Gel-based experiment (6)
Top-down proteomics (4)
Mass spectrometry assay (3)
Mass spectrometry (2)
Affinity proteomics (2)
Complete Genomics, unspecified (1)
Data-independent acquisition (1)
HDMSE (1)
MSE (1)
SWATH MS (1)

Instrument Platform

Illumina HiSeq 2000 (7)
Q Exactive (4)
Illumina Genome Analyzer II (3)
Liquid Chromatography MS - negative - reverse phase (3)
Illumina NovaSeq 6000 (2)
Orbitrap Fusion (2)
Orbitrap Fusion Lumos (2)
Q Exactive HF-X (2)
Q Exactive Plus (2)
TripleTOF 5600 (2)
Liquid Chromatography MS - positive - reverse phase (2)
10X Genomics Single Cell, V3.1 (1)
BD FACSAria III (1)
Scanning hardware (1)
Illumina NextSeq 2000 (1)
Illumina HiSeq 4000 (1)
NextSeq 500 (1)
Instrument (1)
LTQ Orbitrap Velos (1)
Mass spectrometry (1)
Orbitrap Eclipse (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion Tribrid (Thermo Scientific instrument model) (1)
Q Exactive HF (1)
Q-Exactive HFX (1)
TimsTOF HT (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2012 (29)
2024 (25)
2011 (20)
2010 (17)
2014 (16)
2025 (16)
2022 (15)
2015 (14)
2013 (14)
2008 (13)
2026 (13)
2020 (11)
2016 (11)
2021 (10)
2019 (10)
2009 (9)
2018 (7)
2007 (7)
2023 (7)
2017 (5)
2006 (1)
2005 (1)
2004 (1)

CHEBI ID

CHEBI:233061 (1)
CHEBI:89652 (1)
CHEBI:88487 (1)
CHEBI:136077 (1)
CHEBI:142372 (1)
CHEBI:136173 (1)
CHEBI:134643 (1)
CHEBI:136474 (1)
CHEBI:85076 (1)
CHEBI:84436 (1)
CHEBI:89092 (1)
CHEBI:136471 (1)
CHEBI:178067 (1)
CHEBI:136200 (1)
CHEBI:136380 (1)
CHEBI:82837 (1)
CHEBI:167278 (1)
CHEBI:88990 (1)
CHEBI:136212 (1)
CHEBI:155820 (1)
CHEBI:136075 (1)
CHEBI:136080 (1)
CHEBI:90462 (1)
CHEBI:89672 (1)
CHEBI:85000 (1)
CHEBI:136152 (1)
CHEBI:134598 (1)
CHEBI:136081 (1)
CHEBI:136076 (1)
CHEBI:136230 (1)

Metabolite Name

Cholesterol-23,24,25,26,27-¹³C₅ (1)
DGTS(32:7) (1)
Cer(35:5) (1)
GlcCer(33:3 (1)
GlcCer(37:3) (1)
TAG(54:14) (1)
TAG(52:11) (1)
GlcCer(42:2) (1)
PG(44:3) (1)
DGDG(36:5) (1)
PE(30:1) (1)
DAG(34:8) (1)
LGPL-LPA(28:0) (1)
PI(32:5) (1)
LGGL-LDGDG(18:3) (1)
LGPL-LPS(22:0) (1)
LGPL-LPE(16:1) (1)
MGDG(48:7) (1)
LGGL-LMGDG(16:2) (1)
GlcCer(36:1) (1)
LGPL-LPE(16:2) (1)
LGPL-LPE(18:3) (1)
LGPL-LPA(22:0) (1)
LGGL-LDGDG(16:2) (1)
LGPL-LPS(18:0) (1)
Coumarin (dibenzo-pyrone)_like scaffold Hexose-Hexose acid (1)
Hydroxy Methoxypsoralen-like - Hexose (1)
Hydroxy-Methoxypsoralen-like Hexose - Hexose acid (1)
Hydroxy Methoxypsoralen-like - Hexose-dimer (1)
HydroxyMethoxypsoralen-like-Hydroxyglutaric Acid (1)

First Public Date

2014 (7)
2026 (5)
2024 (4)
2023 (4)
2018 (2)
2013 (2)
2025 (1)
2019 (1)

Study status

Completed (2)

Study type

Transcription profiling by array (101)
RNA-seq of coding RNA (18)
Other (10)
Unknown experiment type (5)
RNA-seq of non coding RNA (4)
Comparative genomic hybridization by array (3)
ChIP-seq (3)
DNA-seq (3)
ChIP-chip by array (2)
Methylation profiling by array (2)
Interventional (2)
Transcription profiling by SAGE (1)
Plant - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
Genotyping by array (1)
MicroRNA profiling by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of total RNA (1)

Release Date

2022 (149)
2021 (141)
2023 (117)
2025 (110)
2024 (82)
2018 (76)
2020 (72)
2019 (69)
2017 (64)
2016 (59)
2015 (52)
2014 (49)
2012 (47)
2011 (44)
2013 (37)
2010 (30)
2008 (22)
2026 (18)
2009 (17)
2007 (10)
2006 (8)
2005 (4)
2003 (4)
2004 (3)
2001 (2)
2000 (2)
1997 (2)
2002 (1)
1999 (1)
1998 (1)

Lab affiliation

State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences • Beijing, Beijing Institute of Lifeomics, Beijing, China (5)
Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO), Université de Strasbourg,CNRS, IPHC UMR 7178, 67087 Strasbourg,France (4)
Human Technopole, 20157, Milan, Italy (3)
Laboratoire de Spectrometrie de Masse BioOrganique (LSMBO), Universite de Strasbourg, CNRS, IPHC UMR 7178, 67087 Strasbourg, France (3)
EDyP (2)
1 Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany 2 Wellcome Centre for Cell Biology, School of Biologic Sciences, University of Edinburgh, Edinburgh (1)
1Department of Chemistry, University of Konstanz, Konstanz, Germany 2Konstanz Resea1Department of Chemistry, University of Konstanz, Konstanz, Germany 2Konstanz Research School-Chemical Biology, University of Konstanz, Konstanz, Germany (1)
2Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, FI-00014 Helsinki, Finland Department of Agricultural Sciences, Faculty of Agriculture and Forestry, University of Helsinki, FI-00014 Helsinki, Finland (1)
Advanced Technology Walter & ELiza Hall Institute (1)
Bioinformatics Scientist Van Andel Institute (1)
Boston College, Department of Chemistry (1)
Cellular Proteomics Group Helmholtz Centre for Infection Research Inhoffenstr. 7 38124 Braunschweig Germany (1)
Center for Cancer and Immunology Research, Children’s Research Institute, Children’s National Health System (1)
Center for Neurodegenerative Science Van Andel Research Institute 333 Bostwick Ave N.E., Rm 5051 Grand Rapids, MI 49503 Tel: 616-234-5262 ext. 5262 | Email: viviane.labrie@vai.org Lab website: http://labrielab.vai.org/ (1)
Center for Neurodegenerative Science, Van Andel Institute, Grand Rapids, MI, 49503 USA (1)
Department of Biology, Syracuse University, Syracuse NY, 13244, USA (1)
Department of Cell and Regenerative Biology, University ofWisconsin-Madison, Madison, Wisconsin, 53705, USA (1)
Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA (1)
Department of Chemistry, Imperial College London, Molecular Sciences Research Hub, White City Campus, Wood Lane, London W12 0BZ, U.K (1)
Department of Chemistry, Washington University in St. Louis (1)
Department of Morphology, Cell and Molecular Biology Laboratory (LBCM),Biological Sciences Institute (ICB), Federal University of Minas Gerais (UFMG), Brazil (1)
Department of Pharmacology, Penn State College of Medicine (1)
Department ogf Pharmacy, University "G. d'Annunzio", Chieti, Italy (1)
Depatment of Biomolecular Sciences University of Mississippi (1)
Excellence Cluster on Cellular Stress Responses in Aging Associated Diseases (CECAD) and Center for Molecular Medicine Cologne (CMMC), University of Cologne, Joseph-Stelzmann-Strasse 26, 50931 Cologne, Germany (1)
Fondazione Human Technopole (1)
Genomics Research Center, Academia Sinica, Taipei, Taiwan. Drug Development Center, China Medical University, Taichung, Taiwan. Department of Biological Chemistry, University of California, Irvine. (1)
Institute for Clinical and Translational Research (ICTR), University of Wisconsin-Madison, Madison, WI, 53705, USA (1)
Instituto de Química de Recursos Naturales, Universidad de Talca, Talca, Chile (1)
Laboratoire PRISM INSERM U-1192 Universite de Lille France (1)

Location

Syria (1)
Germany (1)

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Regulation of Autophagy by VEGF-C axis in cancer

A major contributor to cancer mortality is recurrence and subsequent metastatic transformation following therapeutic intervention. In order to develop new treatment modalities or improve the efficacy of current ones it is important to understand the molecular mechanisms that promote therapy-resistan...

ORGANISM(S): Homo sapiens

2012-03-31 | E-GEOD-36085 | biostudies-arrayexpress

Transthyretin interacts with the lysosome-associated membrane protein (LAMP-1) in circulation.

Not available

S-EPMC1133804 | biostudies-literature

Fucosylation of LAMP-1 and LAMP-2 by FUT1 correlates with lysosomal positioning and autophagic flux of breast cancer cells.

Not available

S-EPMC5108328 | biostudies-literature

Detection of Acute HIV-1 Infection by RT-LAMP.

Not available

S-EPMC4439053 | biostudies-literature

Specific quantification of inducible HIV-1 reservoir by RT-LAMP.