Larsson P P - OmicsDI

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Unknown (1453)
Transcriptomics (109)
Proteomics (48)
Models (33)
Metabolomics (9)
Genomics (7)

Organisms

Homo sapiens (101)
Mus musculus (50)
Drosophila melanogaster (9)
Rattus norvegicus (7)
Sus scrofa (5)
Rhizobium leguminosarum (3)
Oncorhynchus mykiss (3)
Oryza sativa Japonica Group (2)
Escherichia coli (2)
Mnemiopsis leidyi (1)
Streptococcus dysgalactiae subsp. equisimilis (1)
Amphimedon queenslandica (1)
Zoarces viviparus (1)
Platynereis dumerilii (1)
Mycobacterium tuberculosis CDC1551 (1)
Streptococcus pyogenes (1)
Medicago truncatula (1)
Salmo salar (1)
Oryctolagus cuniculus (1)
Gallus gallus (1)
Saccharomyces cerevisiae (1)
Danio rerio (1)
Arabidopsis thaliana (1)
Bacteria (1)
Bos taurus (1)

Repository

biostudies-arrayexpress (113)
pride (45)
BioModels (33)
MetaboLights (9)
EGA (3)
MassIVE (3)
ENA (1)

Tissue

Cell culture (10)
Heart (9)
Permanent cell line cell (7)
Liver (5)
C2C12 cell (4)
Epithelial cell (4)
Brain (2)
Epithelial cell of pancreas (2)
Kidney (2)
Neuroendocrine cell (2)
Pancreatic adenocarcinoma cell line (2)
Small intestine (2)
Blood (1)
Blood cell (1)
Bone cancer cell line (1)
Bone cell (1)
Bone marrow (1)
Breast (1)
Cervical cancer cell line (1)
Epithelial cell of lung (1)
Fibroblast (1)
HeLa cell (1)
Lung (1)
Neuroendocrine tumor cell (1)
Neuroendocrine tumor cell line (1)
Pneumocyte (1)
Retina (1)
Skeletal muscle (1)
Skeletal muscle cell line (1)
Skeletal muscle myoblast (1)

Disease

Small intestine neuroendocrine neoplasm (2)
Myeloma (1)
Adenocarcinoma (1)
Normal (1)
Acute leukemia (1)
Breast cancer (1)
Cervix carcinoma (1)
Chronic obstructive pulmonary disease (1)
Colon cancer (1)
Lung cancer (1)
Neuroblastoma (1)
Pancreatic ductal adenocarcinoma (1)
Pancreatic ductal carcinoma (1)
Uveal melanoma (1)
Viral infectious disease (1)

Technology Type

Mass Spectrometry (45)
Shotgun proteomics (30)
Bottom-up proteomics (12)
Data-dependent acquisition (10)
Mass spectrometry (8)
Affinity purification coupled with mass spectrometry proteomics (2)
Data-independent acquisition (2)
Illumina 450K, Bisulfite-Seq (1)
NMR spectroscopy (1)
Gel-based experiment (1)

Instrument Platform

Xevo G2 QTOF (Waters) (3)
Axon- GenePix4000B (2)
Illumina HiSeq 2500 (2)
Illumina HiSeq 2000 (2)
NextSeq 500 (2)
Exactive (Thermo Scientific) (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Microcentrifuge (1)
C1 Single-Cell Auto Prep System, Fluidigm (1)
Covaris, NEBNext Ultra II DNA library prep kit (1)
Computater Servers UPPMAX-SNIC. (1)
Illumina Tru-seq RNA (1)
NanoDrop spectrophotometer (NanoDrop Technologies, Wilmington, DE) (1)
Dynamic light scattering and zeta potential. The experiments were performed on a Malvern Zetasizer NanoZS instrument using a He-Ne laser (Max, 5 mW) at 633 nm. (1)
ScanArray scanning hardware (1)
BGISEQ-500 (1)
NextSeq 550 (1)
Illumina HiSeq 3000 (1)
LTQ Orbitrap Velos (1)
Orbitrap Fusion ETD (1)
Q Exactive Plus (1)
Bruker (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - (1)
Ion Trap (1)

Publication Date

2015 (46)
2013 (21)
2012 (19)
2020 (12)
2010 (12)
2016 (10)
2011 (9)
2018 (8)
2014 (8)
2026 (8)
2025 (7)
2024 (6)
2019 (6)
2021 (6)
2009 (5)
2007 (5)
2023 (5)
2017 (3)
2008 (3)
2006 (2)
2022 (2)

CHEBI ID

CHEBI:15354 (35)
CHEBI:10723 (33)
CHEBI:10983 (33)
CHEBI:1156 (33)
CHEBI:11805 (33)
CHEBI:11851 (33)
CHEBI:1189 (33)
CHEBI:12947 (33)
CHEBI:1301 (33)
CHEBI:13115 (33)
CHEBI:13705 (33)
CHEBI:15343 (33)
CHEBI:15345 (33)
CHEBI:15346 (33)
CHEBI:15351 (33)
CHEBI:15366 (33)
CHEBI:15367 (33)
CHEBI:15371 (33)
CHEBI:15372 (33)
CHEBI:15374 (33)
CHEBI:15377 (33)
CHEBI:15379 (33)
CHEBI:15380 (33)
CHEBI:15414 (33)
CHEBI:15422 (33)
CHEBI:15428 (33)
CHEBI:15430 (33)
CHEBI:15435 (33)
CHEBI:15437 (33)
CHEBI:15439 (33)

Metabolite Name

Linoleic acid (4)
Betaine (3)
Creatine (3)
Creatinine (3)
Deoxycholic acid (3)
Indoleacetic acid (3)
L-Carnitine (3)
L-Phenylalanine (3)
1,2-dilinoleoyl-sn-glycero-3-phosphocholine (2)
1,2-dioleoyl-sn-glycero-3-phosphocholine|1,2-dipetroselenoyl-sn-glycero-3-phosphocholine (2)
1,2-dipalmitoleoyl-sn-glycero-3-phosphocholine (2)
1,2-dipalmitoyl-sn-glycero-3-phosphocholine (2)
1,3,7-Trimethyluric acid (2)
1-O-1'-(Z)-octadecenyl-2-hydroxy-sn-glycero-3-phosphoethanolamine (2)
1-Palmitoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine (2)
1-Stearoyl-2-Hydroxy-sn-Glycero-3-Phosphoethanolamine (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine (2)
1-arachidoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
1-linoleoyl-2-stearoyl-sn-glycerol (2)
1-oleoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
1-oleoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine (2)
1-oleoyl-2-palmitoyl-sn-glycero-3-phosphocholine (2)
1-palmitoyl-2-docosahexaenoyl-sn-glycero-3-phosphocholine (2)
1-palmitoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
1-palmitoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine (2)
1-stearoyl-2-arachidonoyl-sn-glycero-3-phosphoethanolamine|C15-20:4 Phosphatidylcholine (2)
1-stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
1-vaccenoyl-2-palmitoyl-sn-glycerol (2)
10-nitro-9E-octadecenoic acid|9-nitro-9E-octadecenoic acid (2)
17-phenyl trinor Prostaglandin E2|17-phenyl trinor Prostaglandin D2 (2)

IsPrivate

False (33)

Model Flag

Non Kinetic (33)

First Public Date

2013 (1)

Modification

N6-dimethyl-L-lysine (1)
Not available (1)

Study type

Transcription profiling by array (79)
RNA-seq of coding RNA (13)
ChIP-chip by tiling array (4)
Unknown experiment type (3)
Human - Two-color microarray (3)
Transcription profiling by tiling array (2)
ChIP-seq (2)
RNA-seq of coding RNA from single cells (2)
Baseline (1)
Comparative genomic hybridization by array (1)
DNA-seq (1)
RNA-seq of total RNA (1)

Release Date

2022 (163)
2020 (150)
2023 (132)
2021 (129)
2025 (128)
2019 (125)
2024 (122)
2018 (101)
2017 (90)
2016 (86)
2014 (59)
2015 (53)
2012 (51)
2013 (49)
2011 (27)
2010 (22)
2026 (19)
2009 (16)
2007 (9)
2006 (8)
2008 (7)
2005 (7)
2004 (4)
1998 (3)
2003 (2)
2002 (1)
2001 (1)
1995 (1)

Lab affiliation

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, SE-751 23 Uppsala, Sweden. (4)
Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. (3)
Dept. Oncology Pathology, Science for Life Laboratory, Karolinska Institutet, Sweden (2)
Max-Planck-Institute for Biology of Ageing Department of Mitochondrial Proteostasis Joseph-Stelzmann-Str. 9b 50931 Cologne (2)
Biochemical Proteomics Group, Department of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, 82152-Martinsried, Germany (1)
Cell Biology Department Institute of Integrative Biology of the Cell (I2BC,UMR9198) 1, Avenue de la Terrasse (1)
Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 171 77 Stockholm, Sweden (1)
Department of Medical Biochemistry and Biophysics, Karolinska Institutet, SE-17177 Stockholm, Sweden Max Planck Institute for Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, Stockholm 17177, Sweden (1)
Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm 17177, Sweden Max Planck Institute Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, Stockholm 17177, Sweden (1)
Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm 17177, Sweden Max Planck Institute for Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, Stockholm 17177, Sweden (1)
Department of Medical Biochemistry and Microbiology, Uppsala University, PO Box 582, SE-751 23, Uppsala, Sweden (1)
Department of Medical Biochemistry and Microbiology, Uppsala University, Sweden (1)
Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, 50931 Cologne, Germany Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 171 77 Stockholm, Sweden Max Planck Institute Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, Stockholm, Sweden. (1)
Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, D-50931, Germany Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, SE-17177, Sweden Max Planck Institute for Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, 171 77 Stockholm, Sweden (1)
Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden (1)
Department of Oncology and Pathology, Karolinska Institutet, Scilifelab, Stockholm, Sweden (1)
Department of Pharmaceutical Biosciences, Uppsala University, Uppsala, Sweden. (1)
Department of Plant Protection Biology (1)
Depratment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. (1)
Derpatment of Medical Biochemistry, Uppsala University, Uppsala, Sweden. (1)
Division of Rheumatology, Department of Medicine Solna, Karolinska Institutet, Karolinska University Hospital, Stockholm, Sweden (1)
Institute of Biomedicine, Department of Biochemistry and Cell Biology, Sahlgrenska Academy, Gothenburg University, Medicinaregatan 9A, 40530 Göteborg, Sweden. (1)
Institute of bioengineering, School of Life science, EPFL, Switzerland (1)
Karolinska Institute Division of Molecular Metabolism Department of Medical Biochemistry and Biophysics (1)
Karolinska Institutet, Stockholm, Sweden (1)
Krefting Research Centre, Department of Internal Medicine and Clinical Nutrition, Institute of Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden (1)
Lowy Cancer Research Centre School of Medical Sciences UNSW SYDNEY NSW 2052 AUSTRALIA (1)
Lund Stem Cell Center, Division of Molecular Hematology, Lund University, Lund, Sweden (1)
Lung Biology, Department of Experimental Medical Science, Lund University, Lund, Sweden. (1)
Max Planck Institute for Biology of Ageing, Germany (1)

Tags

xref:PubMed:16138928 (1)
xref:PubMed:15857889 (1)
xref:PubMed:19196912 (1)
xref:PubMed:20930125 (1)

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Transcription profiling of human memory T cells stimulated with Phl p-extract in healthy and allergic individuals

Differential transcriptional response of memory T cells stimulated with Phl p-extract in healthy and allergic individuals.

ORGANISM(S): Homo sapiens

2006-01-01 | E-MEXP-243 | biostudies-arrayexpress

Irregular Dietary Habits with a High Intake of Cereals and Sweets Are Associated with More Severe Gastrointestinal Symptoms in IBS Patients.

Not available

S-EPMC6627681 | biostudies-literature

Optimization of Thermoelectric Performance in p-Type SnSe Crystals Through Localized Lattice Distortions and Band Convergence.

Not available

S-EPMC11831502 | biostudies-literature

Sjogren-Larsson syndrome: The mild end of the phenotypic spectrum.

Not available

S-EPMC7203653 | biostudies-literature

Accumulation of ether phospholipids in induced pluripotent stem cells and oligodendrocyte-lineage cells established from patients with Sjogren-Larsson syndrome.

Not available

S-EPMC11608845 | biostudies-literature

Disturbed brain ether lipid metabolism and histology in Sjogren-Larsson syndrome.

Not available

S-EPMC7689726 | biostudies-literature

The Human Phospholipase B-II Precursor (HPLBII-P) in Urine as a Novel Biomarker of Glomerular Activity in COVID-19 and Diabetes Mellitus.

Not available

S-EPMC11084804 | biostudies-literature

The Montana Radon Study: social marketing via digital signage technology for reaching families in the waiting room.

Not available

S-EPMC4358189 | biostudies-literature

Cathepsin K Contributes to Cavitation and Collagen Turnover in Pulmonary Tuberculosis

Cavitation in tuberculosis (TB) enables highly efficient person-to-person aerosol transmission. Currently, a number of hypotheses exist regarding the mechanisms underlying this process. To explore this process, we undertook an unbiased next-generation transcriptional analysis of samples from cavity ...

ORGANISM(S): Oryctolagus cuniculus

2015-11-03 | E-GEOD-68206 | biostudies-arrayexpress

Chromatin IP of POF, HP1 and H3K9ac in S2 cells and salivary glands.

Two chromosome-targeting and gene regulatory systems are present in Drosophila melanogaster. The male X-chromosome is targeted by the male-specific lethal complex believed to mediate the two-fold up-regulation of the X-linked genes. The highly heterochromatic 4th chromosome is specifically targeted ...

ORGANISM(S): Drosophila melanogaster

2007-10-02 | E-GEOD-8296 | biostudies-arrayexpress

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