Larsson Per P - OmicsDI

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Unknown (173)
Transcriptomics (51)
Proteomics (26)
Metabolomics (6)
Genomics (2)

Organisms

unidentified marine bacterioplankton (26)
Meloidogyne incognita (26)
Cyanobacteriota (26)
Chlorella sp. FC2 IITG (26)
Sinorhizobium americanum (26)
Avena sativa (26)
Legionella pneumophila str. Paris (26)
Rhizobium sp. CIAT652 (26)
Aedes albopictus (26)
Sinorhizobium americanum CCGM7 (26)
Rhizobium leguminosarum bv. phaseoli CCGM1 (26)
Spondylus gaederopus (26)
Viola odorata (26)
Phlebotomus papatasi (26)
Ruegeria pomeroyi (26)
Willaertia magna (26)
Dugesia japonica (26)
Xanthomonas retroflexus (26)
Helicoverpa armigera (26)
Aspergillus niger (26)
Homo sapiens (17)
Drosophila melanogaster (9)
Mus musculus (9)
Sus scrofa (5)
Rattus norvegicus (4)
Rhizobium leguminosarum (3)
Oncorhynchus mykiss (2)
Platynereis dumerilii (1)
Streptococcus pyogenes (1)
Gallus gallus (1)

Repository

biostudies-arrayexpress (53)
pride (26)
MetaboLights (6)

Tissue

Permanent cell line cell (6)
Heart (5)
C2C12 cell (4)
Liver (3)
Cell culture (3)
Pancreatic adenocarcinoma cell line (2)
Epithelial cell of pancreas (2)
Neuroendocrine tumor cell (1)
Neuroendocrine cell (1)
Cervical cancer cell line (1)
Skeletal muscle cell line (1)
Bone cancer cell line (1)
Skeletal muscle myoblast (1)
Epithelial cell of lung (1)
Type II pneumocyte (1)
Small intestine (1)
Bone cell (1)
Breast (1)
Brain (1)
HeLa cell (1)
Spleen (1)
Lung (1)
Epithelial cell (1)
Kidney (1)

Disease

Normal (1)
Small intestine neuroendocrine neoplasm (1)
Pancreatic ductal carcinoma (1)
Chronic obstructive pulmonary disease (1)
Pancreatic ductal adenocarcinoma (1)
Lung cancer (1)
Cervix carcinoma (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (26)
Shotgun proteomics (18)
Bottom-up proteomics (7)
Mass spectrometry (6)
Data-dependent acquisition (5)
Data-independent acquisition (2)
Affinity purification coupled with mass spectrometry proteomics (2)

Instrument Platform

Xevo G2 QTOF (Waters) (3)
Axon- GenePix4000B (2)
Illumina HiSeq 2500 (2)
Illumina HiSeq 2000 (2)
Microcentrifuge (1)
C1 Single-Cell Auto Prep System, Fluidigm (1)
Covaris, NEBNext Ultra II DNA library prep kit (1)
Computater Servers UPPMAX-SNIC. (1)
Illumina Tru-seq RNA (1)
NanoDrop spectrophotometer (NanoDrop Technologies, Wilmington, DE) (1)
Dynamic light scattering and zeta potential. The experiments were performed on a Malvern Zetasizer NanoZS instrument using a He-Ne laser (Max, 5 mW) at 633 nm. (1)
ScanArray scanning hardware (1)
BGISEQ-500 (1)
NextSeq 550 (1)
Illumina HiSeq 3000 (1)
NextSeq 500 (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - (1)
Exactive (Thermo Scientific) (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2020 (10)
2013 (10)
2012 (10)
2026 (6)
2025 (5)
2024 (4)
2018 (4)
2014 (4)
2007 (4)
2023 (4)
2016 (3)
2015 (3)
2011 (3)
2010 (3)
2008 (3)
2009 (2)
2006 (2)
2022 (2)
2017 (1)
2021 (1)
2019 (1)

CHEBI ID

CHEBI:28717 (3)
CHEBI:131440 (2)
CHEBI:72535 (2)
CHEBI:91146 (2)
CHEBI:64525|CHEBI:131586 (2)
CHEBI:74669|CHEBI:86330 (2)
CHEBI:72529 (2)
CHEBI:64523|CHEBI:131585 (2)
CHEBI:64424|CHEBI:131581 (2)
CHEBI:85766|CHEBI:71735 (2)
CHEBI:79110|CHEBI:86344 (2)
CHEBI:91322|CHEBI:71737 (2)
CHEBI:66855 (2)
CHEBI:64516|CHEBI:131583 (2)
CHEBI:66854|CHEBI:131584 (2)
CHEBI:83717 (2)
CHEBI:86968 (2)
CHEBI:65302 (2)
CHEBI:86527|CHEBI:64587 (2)
CHEBI:131438 (2)
CHEBI:65293 (2)
CHEBI:86519|CHEBI:64586 (2)
CHEBI:65292 (2)
CHEBI:86523|CHEBI:72510 (2)
CHEBI:86517 (2)
CHEBI:86515|CHEBI:72505 (2)
CHEBI:86346 (2)
CHEBI:86337 (2)
CHEBI:36021 (2)
CHEBI:4260|CHEBI:36378 (2)

Metabolite Name

L-Tryptophan (3)
Phosphatidylcholine(42:7) (2)
Phosphatidylcholine(40:5) (2)
Sphingomyelin(42:3) (2)
Phosphatidylcholine(40:6) (2)
N-(15Z-tetracosenoyl)-sphinganine-1-phosphocholine (2)
Phosphatidylcholine(38:2) (2)
Phosphatidylcholine(38:3) (2)
Phosphatidylcholine(38:4) (2)
Phosphatidylcholine(38:5)|Phosphoethanolamine(41:5) (2)
1-palmitoyl-2-docosahexaenoyl-sn-glycero-3-phosphocholine (2)
Phosphatidylcholine(38:7) (2)
Sphingomyelin(41:2) (2)
Phosphatidylcholine(36:1) (2)
1,2-dioleoyl-sn-glycero-3-phosphocholine|1,2-dipetroselenoyl-sn-glycero-3-phosphocholine (2)
Sphingomyelin(40:2) (2)
Phosphatidylcholine(36:3)|Phosphoethanolamine(39:3) (2)
Phosphatidylcholine(36:5) (2)
Phosphatidylcholine(36:6) (2)
Phosphatidylcholine(34:3)|Phosphoethanolamine(37:3) (2)
Phosphatidylcholine(35:2)|Phosphoethanolamine(38:2) (2)
1-stearoyl-2-arachidonoyl-sn-glycero-3-phosphoethanolamine|C15-20:4 Phosphatidylcholine (2)
Phosphatidylcholine(35:4)|Phosphoethanolamine(38:4) (2)
C16-20:5 Phosphatidylcholine (2)
Phosphatidylcholine(34:0) (2)
Phosphatidylcholine(34:2)|Phosphoethanolamine(37:2) (2)
Phosphatidylcholine(34:3) (2)
Phosphatidylcholine(34:4) (2)
Phosphatidylcholine(34:5)|Phosphoethanolamine(37:5) (2)
Phosphatidylcholine(33:1)|Phosphoethanolamine(36:1) (2)

Modification

N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (30)
RNA-seq of coding RNA (8)
ChIP-chip by tiling array (4)
Human - Two-color microarray (3)
Transcription profiling by tiling array (2)
Baseline (1)
Unknown experiment type (1)
ChIP-seq (1)
DNA-seq (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of total RNA (1)

Release Date

2020 (22)
2025 (21)
2022 (20)
2024 (17)
2017 (16)
2016 (16)
2012 (16)
2013 (15)
2023 (13)
2018 (12)
2021 (12)
2014 (8)
2019 (8)
2011 (6)
2015 (5)
2010 (4)
2007 (4)
2008 (3)
2026 (3)
2009 (2)
2006 (2)
2005 (1)

Lab affiliation

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, SE-751 23 Uppsala, Sweden. (4)
Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. (3)
Lung Biology, Department of Experimental Medical Science, Lund University, Lund, Sweden. (1)
Karolinska Institute Division of Molecular Metabolism Department of Medical Biochemistry and Biophysics (1)
Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, 50931 Cologne, Germany Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 171 77 Stockholm, Sweden Max Planck Institute Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, Stockholm, Sweden. (1)
Uppsala University, Uppsala, Sweden (1)
Division of Rheumatology, Department of Medicine Solna, Karolinska Institutet, Karolinska University Hospital, Stockholm, Sweden (1)
Dept. Oncology Pathology, Science for Life Laboratory, Karolinska Institutet, Sweden (1)
Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden (1)
Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 171 77 Stockholm, Sweden (1)
Depratment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. (1)
Derpatment of Medical Biochemistry, Uppsala University, Uppsala, Sweden. (1)
Max Planck Institute for Biology of Ageing, Germany (1)
Proteomics Core Facility, University of Gothenburg, Gothenburg, Sweden (1)
Department of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, D-50931, Germany Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, SE-17177, Sweden Max Planck Institute for Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, 171 77 Stockholm, Sweden (1)
Uppsala University (1)
Max Planck Institute of Biochemistry, Dept. Proteomics and Signal Transduction, Martinsried, Germany (1)
Department of Medical Biochemistry and Microbiology, Uppsala University, PO Box 582, SE-751 23, Uppsala, Sweden (1)
Max-Planck-Institute for Biology of Ageing Department of Mitochondrial Proteostasis Joseph-Stelzmann-Str. 9b (1)
Department of Pharmaceutical Biosciences, Uppsala University, Uppsala, Sweden. (1)
Karolinska Institutet, Stockholm, Sweden (1)

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Chromatin IP of POF, HP1 and H3K9ac in S2 cells and salivary glands.

Two chromosome-targeting and gene regulatory systems are present in Drosophila melanogaster. The male X-chromosome is targeted by the male-specific lethal complex believed to mediate the two-fold up-regulation of the X-linked genes. The highly heterochromatic 4th chromosome is specifically targeted ...

ORGANISM(S): Drosophila melanogaster

2007-10-02 | E-GEOD-8296 | biostudies-arrayexpress

Transcription profiling of human memory T cells stimulated with Phl p-extract in healthy and allergic individuals

Differential transcriptional response of memory T cells stimulated with Phl p-extract in healthy and allergic individuals.

ORGANISM(S): Homo sapiens

2006-01-01 | E-MEXP-243 | biostudies-arrayexpress

Transcript profiling in S2 cells and salivary glands.

ORGANISM(S): Drosophila melanogaster

2007-10-02 | E-GEOD-8297 | biostudies-arrayexpress

Colostrum as a Protective Factor Against Peanut Allergy: Evidence From a Birth Cohort.

Not available

S-EPMC12862506 | biostudies-literature

Chromatin IP of POF, HP1 and H3K9ac and transcript profiling in S2 cells and salivary glands

ORGANISM(S): Drosophila melanogaster

2007-10-02 | E-GEOD-8301 | biostudies-arrayexpress

HP1a recruitment to promoters is independent of H3K9 methylation in Drosophila melanogaster

Heterochromatin protein 1 (HP1) proteins are important regulators of heterochromatin mediated gene silencing and chromosome structure and it is well known as the reader of the heterochromatin mark methylation of histone H3 lysine 9 (H3K9me). In Drosophila three different histone lysine methyl transf...

ORGANISM(S): Drosophila melanogaster

2012-12-21 | E-GEOD-38366 | biostudies-arrayexpress

Physical activity and not sedentary time per se influences on clustered metabolic risk in elderly community-dwelling women.

Not available

S-EPMC5384780 | biostudies-literature

Buffering and proteolysis are induced upon segmental haploidy in Drosophila melanogaster.

Aneuploidy, i.e., variation in the number of individual chromosomes (chromosomal aneuploidy) or chromosome segment (segmental aneuploidy) is associated with developmental abnormalities and reduced fitness in all species examined, is the leading cause of miscarriages and mental retardations and a hal...

ORGANISM(S): Drosophila melanogaster

2012-04-04 | E-GEOD-34400 | biostudies-arrayexpress

HP1a, Su(var)3-9, SETDB1 and POF stimulate or repress gene expression depending on genomic position, gene length and expression pattern in Drosophila melanogaster

Heterochromatin protein 1a (HP1a) is a chromatin associated protein that has been well studied in many model organisms, such as Drosophila, where it is a determining factor for classical heterochromatin. HP1a is associated with the two histone methyltransferases SETDB1 and Su(var)3-9, which mediate ...

ORGANISM(S): Drosophila melanogaster

2013-04-05 | E-GEOD-43478 | biostudies-arrayexpress

Fibrotic Myofibroblasts Manifest Genome-Wide Derangements of Translational Control

As a group, fibroproliferative disorders of the lung, liver, kidney, heart, vasculature and integument are common, progressive and refractory to therapy. They can emerge following toxic insults, but are frequently idiopathic. Their enigmatic propensity to resist therapy and progress to organ failure...

ORGANISM(S): Homo sapiens

2008-11-20 | E-GEOD-11196 | biostudies-arrayexpress

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258 Results

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