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GenomicsSystematic bias in high-throughput sequencing data and its correction by BEADS
ChIP-seq and input sequence data used in the development and evaluation of the BEADS normalization method. Examination of ChIP and input sequence reads across the worm genome
ORGANISM(S): Caenorhabditis elegans 
2011-05-25 | E-GEOD-29427 | biostudies-arrayexpress
UnknownSugar consumption in schoolchildren from southern Spain and influence on the prevalence of obesity.
Not available
S-EPMC7678956 | biostudies-literature
GenomicsThe DREAM complex promotes gene body deposition of H2A.Z for target repression
As part of a study of the function of the C. elegans DREAM complex, here we have used ChIP-seq to analyze the patterns of histone variant HTZ-1/H2A.Z and various histone modifications in lin-35(n745) mutants. In addition, we have used RNA-seq to analyze gene expression in lin-35 and htz-1 mutants as...
ORGANISM(S): Caenorhabditis elegans 
2015-04-02 | E-GEOD-62833 | biostudies-arrayexpress
TranscriptomicsChromatin immunoprecipitation of histone H3 and several methylated H3 variants in Caenorhabditis elegans
Genome-wide profiling of histone H3 and several methylated H3 variants
ORGANISM(S): Caenorhabditis elegans 
2009-02-01 | E-TABM-623 | biostudies-arrayexpress
TranscriptomicsAhringer AB4729_H3K27AC361571_N2_L3
modENCODE_submission_2771 This submission comes from a modENCODE project of Jason Lieb. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The focus of our analysis will be elements that specify nucleosome positioning and occupancy, control domains of gene expressi...
ORGANISM(S): Caenorhabditis elegans 
2010-11-18 | E-GEOD-25354 | biostudies-arrayexpress
TranscriptomicsAhringer MP05858_H4DAM1636076_N2_L3
modENCODE_submission_2768 This submission comes from a modENCODE project of Jason Lieb. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The focus of our analysis will be elements that specify nucleosome positioning and occupancy, control domains of gene expressi...
ORGANISM(S): Caenorhabditis elegans 
2010-11-18 | E-GEOD-25352 | biostudies-arrayexpress
TranscriptomicsAhringer AB9045_H3K9ME1291918_N2_L3
modENCODE_submission_2770 This submission comes from a modENCODE project of Jason Lieb. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The focus of our analysis will be elements that specify nucleosome positioning and occupancy, control domains of gene expressi...
ORGANISM(S): Caenorhabditis elegans 
2010-11-18 | E-GEOD-25353 | biostudies-arrayexpress
TranscriptomicsAhringer AB8895_H3K4ME1733246_N2_L3
modENCODE_submission_2775 This submission comes from a modENCODE project of Jason Lieb. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The focus of our analysis will be elements that specify nucleosome positioning and occupancy, control domains of gene expressi...
ORGANISM(S): Caenorhabditis elegans 
2010-11-18 | E-GEOD-25357 | biostudies-arrayexpress
TranscriptomicsAhringer WA30634849_H3K27AC_N2_L3
modENCODE_submission_2773 This submission comes from a modENCODE project of Jason Lieb. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The focus of our analysis will be elements that specify nucleosome positioning and occupancy, control domains of gene expressi...
ORGANISM(S): Caenorhabditis elegans 
2010-11-18 | E-GEOD-25355 | biostudies-arrayexpress
TranscriptomicsAhringer AB15823_H4K8AC487128_N2_L3
modENCODE_submission_2774 This submission comes from a modENCODE project of Jason Lieb. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The focus of our analysis will be elements that specify nucleosome positioning and occupancy, control domains of gene expressi...
ORGANISM(S): Caenorhabditis elegans 
2010-11-18 | E-GEOD-25356 | biostudies-arrayexpress
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