Le Chi C - OmicsDI

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Unknown (388)
Transcriptomics (171)
Genomics (40)
Proteomics (2)
Metabolomics (2)

Organisms

Homo sapiens (100)
Mus musculus (57)
Arabidopsis thaliana (8)
Rattus norvegicus (7)
Paxillus involutus (2)
Ectocarpus siliculosus (2)
Staphylococcus aureus (2)
Bos taurus (2)
Saccharomyces cerevisiae (2)
Sus scrofa (2)
Danio rerio (2)
Serendipita vermifera (1)
Mesorhizobium metallidurans STM 2683 (1)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (1)
Populus x canadensis (1)
Herbaspirillum seropedicae (1)
Populus euphratica (1)
Equus caballus (1)
Oryza sativa Indica Group (1)
Apis mellifera (1)
Streptococcus pneumoniae (1)
Solanum tuberosum (1)
Glycine max (1)
Caenorhabditis elegans (1)
Triticum aestivum (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Drosophila melanogaster (1)
Pseudomonas sp. 'Pseudom. M1' (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (206)
EGA (4)
MetaboLights (2)
MassIVE (1)
pride (1)
ENA (1)

Disease

Normal (3)
Hepatomegaly (1)
Epithelioid mesothelioma (1)
Non-diabetic (1)
Reference (1)
Central nervous system cancer (1)
Breast cancer (1)
Neuroblastoma (1)

Technology Type

Mass spectrometry (2)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Mass Spectrometry (1)
Shotgun proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (12)
Illumina HiSeq 2000 (5)
NextSeq 2000 (4)
10x Genomics Chromium Controller (3)
Illumina HiSeq 2500 (2)
Illumina HiSeq 4000 (2)
NextSeq 500 (2)
10x Genomics Chromium Controller, PCR thermocycler, Agilent 2100 Bioanalyzer with High Sensitivity DNA chip (for quality control) (1)
Water bath (for enzymatic dissociation), cell strainer (70-μm), benchtop centrifuge, automated cell counter/hemocytometer, biological safety cabinet (1)
Sterile surgical instrument set (scalpels, tissue forceps, dissection scissors), animal operating table, biological safety cabinet (1)
RStudio and R with illuminaio, sva and BioMart packages (1)
HumanHT-12 V4 beadarray (1)
Illumina TotalPre-96 RNA Amp kit (1)
NucleoSpin RNA kit, NanoDrop ND-1000 and Agilent 2100 bioanalyzer (1)
Dynabeads CD8+ isolation kit (1)
Chromium Controller (1)
HP desktop (1)
Fluidics workstation (1)
Axon GenePix 4000A scanning hardware (1)
Spectronic Helios Alpha UV-Vis spectrophotometer (1)
Illumina Genome Analyzer II (1)
LTQ Orbitrap Velos (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)

Publication Date

2014 (27)
2013 (27)
2010 (27)
2012 (26)
2011 (21)
2015 (18)
2016 (10)
2026 (8)
2009 (7)
2008 (5)
2007 (5)
2025 (4)
2021 (4)
2018 (4)
2017 (3)
2024 (2)
2022 (2)
2020 (2)
2019 (2)
2006 (2)
2005 (2)
2023 (1)
2004 (1)

CHEBI ID

CHEBI:10017 (1)
CHEBI:10724 (1)
CHEBI:107634 (1)
CHEBI:107639 (1)
CHEBI:111284 (1)
CHEBI:113529 (1)
CHEBI:1157 (1)
CHEBI:116314 (1)
CHEBI:122 (1)
CHEBI:125678 (1)
CHEBI:131887 (1)
CHEBI:132823 (1)
CHEBI:132983 (1)
CHEBI:134076 (1)
CHEBI:134231 (1)
CHEBI:134281 (1)
CHEBI:137160 (1)
CHEBI:137306 (1)
CHEBI:137332 (1)
CHEBI:140928 (1)
CHEBI:141538 (1)
CHEBI:142273 (1)
CHEBI:144065 (1)
CHEBI:144069 (1)
CHEBI:144071 (1)
CHEBI:144072 (1)
CHEBI:144073 (1)
CHEBI:144075 (1)
CHEBI:144076 (1)
CHEBI:144100 (1)

Metabolite Name

()-2-(2-Furanyl)pyrrolidine (1)
(+)-2,3-Dihydro-3-methyl-1H-pyrrole (1)
(1S,2S,4R,8S)-p-Menthane-1,2,8,9-tetrol 2-glucoside (1)
(2E)-Decenoyl-ACP (1)
(2R)-2-Hydroxy-2-methylbutanenitrile (1)
(2R,3R,4R)-2-Amino-4-hydroxy-3-methylpentanoic acid (1)
(3beta,22R,23R,24S)-3,22,23-Trihydroxystigmastan-6-one (1)
(3beta,4alpha,5alpha,23E)-4-Methylergosta-7,23-dien-3-ol (1)
(3beta,4beta,5alpha)-4-Methylergosta-7,24(28)-dien-3-ol (1)
(3beta,5alpha,6beta,22E,24R)-23-Methylergosta-7,22-diene-3,5,6-triol (1)
(3beta,5alpha,6beta,7alpha,22E,24R)-Ergosta-8,22-diene-3,5,6,7-tetrol (1)
(3beta,5alpha,6beta,9alpha,22E,24R)-23-Methylergosta-7,22-diene-3,5,6,9-tetrol (1)
(E)-5-(3,4,5,6-Tetrahydro-3-pyridylidenemethyl)-2-furanmethanol (1)
(R)-2-Nitro-p-mentha-1,5-diene (1)
(R)-N-Methylsalsolinol (1)
1,2,3,4,5,6-Hexahydro-5-methyl-7H-cyclopenta[b]pyridin-7-one (1)
1,2,3,4,5,6-Hexahydro-7H-cyclopenta[b]pyridin-7-one (1)
1,3,5-Trihydroxybenzene (1)
1,3,6-tri-O-methylarthothelin (1)
1,6-Dihydroxy-3,8-dimethylxanthone (1)
1,7-Dimethylguanosine (1)
1-(1-Pyrrolidinyl)-2-propanone (1)
1-(3-Aminopropyl)-4-aminobutanal (1)
1-(9Z-hexadecenoyl)-glycero-3-phosphate (1)
1-(beta-D-Ribofuranosyl)-1,4-dihydronicotinamide (1)
1-Amino-propan-2-ol (1)
1-Ethyl-1H-pyrrole-2-carboxaldehyde (1)
1-Hexanethiol (1)
1-Isothiocyanato-7-(methylthio)heptane (1)
1-Methyl-2-pyrrolecarboxaldehyde (1)

First Public Date

2026 (1)

Study type

Transcription profiling by array (106)
ChIP-seq (34)
RNA-seq of coding RNA (20)
RNA-seq of coding RNA from single cells (11)
ChIP-chip by tiling array (7)
Comparative genomic hybridization by array (5)
Methylation profiling by array (5)
Cell line - High-throughput sequencing (3)
ChIP-chip by array (3)
Other (2)
RNA-seq of non coding RNA (2)
Unknown experiment type (1)
Human - Single-cell sequencing (1)
Human - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
Genotyping by array (1)
Hi-C (1)
Single nucleus RNA sequencing (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (57)
2021 (53)
2023 (51)
2022 (46)
2024 (44)
2014 (37)
2013 (33)
2015 (29)
2012 (29)
2010 (29)
2020 (28)
2019 (27)
2011 (27)
2016 (22)
2026 (20)
2017 (18)
2018 (16)
2009 (9)
2007 (7)
2008 (6)
2006 (3)
2005 (2)
2004 (1)

Lab affiliation

Micalis Institute AgroParisTech INRA 78350 Jouy-en-Josas (1)

Tags

xref:PubMed:41741874 (1)

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Gene expression and H3K27 tri-methylation analysis of meristematic tissue (Me) and young leaves (Le) isolated by manual dissection of clv3-9 plants

This SuperSeries is composed of the following subset Series: GSE24464: Expression analysis of meristematic tissue (Me) and young leaves (Le) isolated by manual dissection of clv3-9 plants GSE24474: H3K27 tri-methylation analysis of meristematic tissue (Me) and young leaves (Le) isolated by manual di...

ORGANISM(S): Arabidopsis thaliana

2011-04-20 | E-GEOD-24507 | biostudies-arrayexpress

COVID-19 et psoriasis de l’enfant : facteurs associes a une evolution defavorable de la COVID-19 et impact de l’infection sur le psoriasis. Registre Chi-PsoCov

Not available

S-EPMC9748132 | biostudies-literature

The seroincidence of childhood Shigella sonnei infection in Ho Chi Minh City, Vietnam.

Not available

S-EPMC10635567 | biostudies-literature

Unmet needs in occupational health: prevention and management of viral hepatitis in healthcare workers in Ho Chi Minh City, Vietnam: a mixed-methods study.

Not available

S-EPMC8513255 | biostudies-literature

A New Pathway for the Preparation of Pyrano[2,3-c]pyrazoles and molecular Docking as Inhibitors of p38 MAP Kinase.