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TranscriptomicsChromatin immunoprecipitation of wild type, SET2 deletion, Rco1 PHD domain deletion and Eaf3 chromodomain deletion yeast using anti-acetyl-histone H4
Nucleosomes must be deacetylated behind elongating RNA polymerase II to prevent cryptic initiation of transcription within the coding region. RNA polymerase II signals for deacetylation through methylation of histone H3 lysine 36 (H3K36) which provides the recruitment signal for the Rpd3S deacetylas...
ORGANISM(S): Saccharomyces cerevisiae 
2007-05-16 | E-TABM-260 | biostudies-arrayexpress
UnknownThe chromatin remodeler Ino80 mediates RNAPII pausing site determination.
Not available
S-EPMC8524862 | biostudies-literature
UnknownSpt5 orchestrates cryptic transcript suppression and transcriptional directionality.
Not available
S-EPMC11496750 | biostudies-literature
UnknownThe Ino80 complex mediates epigenetic centromere propagation via active removal of histone H3.
Not available
S-EPMC5597579 | biostudies-literature
UnknownA compendium of chromatin contact maps reflecting regulation by chromatin remodelers in budding yeast.
Not available
S-EPMC8569116 | biostudies-literature
UnknownDot1 regulates nucleosome dynamics by its inherent histone chaperone activity in yeast.
Not available
S-EPMC5770421 | biostudies-literature
UnknownThe 19S proteasome is directly involved in the regulation of heterochromatin spreading in fission yeast.
Not available
S-EPMC5641893 | biostudies-literature
TranscriptomicsDynamic changes of DNA methylome and hydroxymethylome during neural differentiation of hES cells (Methylation BeadChip)
DNA methylation and hydroxymethylation have been implicated in normal development and differentiation, but our knowledge about the genome-wide distribution of 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC) during cellular differentiation remains limited. Using in vitro model system of gra...
ORGANISM(S): Homo sapiens 
2013-11-04 | E-GEOD-38216 | biostudies-arrayexpress
GenomicsDynamic changes of DNA methylome and hydroxymethylome during neural differentiation of hES cell (hMeDIP-Seq and MBD-Seq)
DNA methylation and hydroxymethylation have been implicated in normal development and differentiation, but our knowledge about the genome-wide distribution of 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC) during cellular differentiation remains limited. Using in vitro model system of gra...
ORGANISM(S): Homo sapiens 
2013-11-04 | E-GEOD-38214 | biostudies-arrayexpress
UnknownComparative characterization of 3D chromatin organization in triple-negative breast cancers.
Not available
S-EPMC9166756 | biostudies-literature
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