Lee J-K JK - OmicsDI

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Unknown (1057)
Genomics (27)
Proteomics (25)
Metabolomics (15)
Transcriptomics (8)
Other (1)
Multiomics (1)

Organisms

Homo sapiens (31)
Mycobacterium tuberculosis SP7 (16)
Mycobacterium tuberculosis SP10 (16)
Mycobacterium tuberculosis SP13 (16)
Mycobacterium tuberculosis SP22 (16)
Chlamydomonas reinhardtii (16)
Enterococcus mundtii CRL35 (16)
Oncorhynchus tshawytscha (16)
Pseudomonas canadensis (16)
Human alphaherpesvirus 1 strain 17 (16)
Mycobacterium tuberculosis SP1 (16)
Marchantia polymorpha subsp. ruderalis (16)
Methylocystis sp. (16)
Exiguobacterium sp. SH31 (16)
Palaemonetes sp. common grass shrimp associated circular virus (16)
Amaranthus tricolor (16)
Spirochaeta sp. ELBA (16)
Clavibacter nebraskensis NCPPB 2581 (16)
Porites pukoensis (16)
Porphyromonas gingivalis (16)
Leishmania tarentolae (16)
Porphyromonas gingivalis W83 (16)
Human betaherpesvirus 5 (16)
Bothrops insularis (16)
Bothrops jararaca (16)
Bothrops jararacussu (16)
Saccharomyces cerevisiae (2)
Mus musculus (2)
Rattus norvegicus (1)
Pseudomonas putida KT2440 (1)

Repository

EGA (26)
pride (16)
MetaboLights (15)
biostudies-arrayexpress (10)
MassIVE (7)
GPMDB (1)
PanoramaPublic (1)

Tissue

Brain (3)
Blood (2)
Permanent cell line cell (2)
Monocyte (2)
T cell (2)
Lung (2)
Placenta (2)
Retina (2)
Cell culture (2)
Epithelial cell (2)
Rectum (1)
Cytotoxic T-lymphocyte (1)
Retinal cell (1)
Frontal lobe (1)
Helper T-lymphocyte (1)
B-lymphocyte (1)
Neutrophil (1)
Natural killer cell (1)
Platelet (1)
Blood platelet (1)
Blood cell (1)
Colon (1)
Prostate gland (1)
Gall bladder (1)
Pancreas (1)
Gut (1)
Testis (1)
Ovary (1)
Esophagus (1)
Spinal cord (1)

Disease

Gray platelet syndrome (2)
Not Available (1)
Hydrocephalus (1)
Myopia (1)
Malignant neoplasm of ovary (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (16)
Mass spectrometry (15)
Shotgun proteomics (7)
Bottom-up proteomics (3)
Data-dependent acquisition (2)
SWATH MS (2)
Illumina OncoArray (1)
ILLUMINA, Illumina HiSeq 2500, HiSeq X Ten (1)
HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
NMR spectroscopy (1)
Top-down proteomics (1)
Data-independent acquisition (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (7)
Liquid Chromatography MS - negative - reverse phase (5)
Q Exactive (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
Orbitrap Fusion (2)
Orbitrap Fusion Lumos (2)
Illumina HiSeq 4000 (1)
Instrument (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap Velos (1)
Liquid Chromatography MS - - reverse phase (1)
Direct infusion MS - positive (1)
Direct infusion MS - negative (1)
Nuclear Magnetic Resonance (NMR) (1)
5975C Series GC/MSD (Agilent) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)

Publication Date

2021 (8)
2023 (7)
2018 (6)
2026 (4)
2025 (3)
2020 (3)
2016 (2)
2015 (2)
2014 (2)
2013 (2)
2012 (2)
2024 (2)
2022 (2)
2011 (1)
2010 (1)
2019 (1)
2017 (1)

CHEBI ID

CHEBI:17368 (7)
CHEBI:16335 (6)
CHEBI:16708 (6)
CHEBI:17351 (6)
CHEBI:16196 (6)
CHEBI:28044 (5)
CHEBI:18295 (5)
CHEBI:17568 (5)
CHEBI:17154 (5)
CHEBI:7916 (5)
CHEBI:18183 (5)
CHEBI:17596 (5)
CHEBI:88824 (4)
CHEBI:169985 (4)
CHEBI:15940 (4)
CHEBI:27468 (4)
CHEBI:16761 (4)
CHEBI:15727 (4)
CHEBI:18323 (4)
CHEBI:18050 (4)
CHEBI:17509 (4)
CHEBI:17992 (4)
CHEBI:15603 (4)
CHEBI:17895 (4)
CHEBI:16020 (4)
CHEBI:17295 (4)
CHEBI:64563 (4)
CHEBI:28865 (4)
CHEBI:17821 (4)
CHEBI:16566 (4)

Metabolite Name

Linoleic acid (4)
Nicotinate (3)
Uracil (3)
L-Leucine (3)
Hypoxanthine (3)
L-Phenylalanine (3)
Adenosine (3)
Adenine (3)
Creatinine (3)
Oleic acid (3)
Nicotinate D-ribonucleotide (2)
Coenzyme A (CoA) (2)
Gamma-L-Glutamyl-L-valine (2)
Nicotinamide adenine dinucleotide phosphate (NADP) (2)
Flavin mononucleotide (FMN) (2)
Uridine 5'-monophosphate (UMP) (2)
Adenosine 3',5'-cyclic phosphate (cAMP) (2)
Gamma-L-Glutamyl-L-glutamic acid (2)
Cytidine 5'-monophosphate (CMP) (2)
Pyridoxal (Vitamin B6) (2)
Guaiacol sulfate (2)
N-Acetylcadaverine (2)
Nicotinamide ribotide (2)
L-Malic acid (2)
Taurocholic acid (2)
Nicotinamide adenine dinucleotide (NAD) (2)
EDTA (2)
Adenosine monophosphate (AMP) (2)
Adenosine 5'-diphosphate (ADP) (2)
5-L-Glutamyl-L-alanine (2)

Study type

Transcription profiling by array (3)
Proteomic profiling by mass spectrometer (1)
ChIP-chip by array (1)
Other (1)
ChIP-seq (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of coding RNA (1)

Release Date

2022 (136)
2023 (124)
2025 (117)
2024 (113)
2021 (107)
2020 (97)
2019 (56)
2018 (50)
2016 (44)
2017 (42)
2015 (35)
2014 (30)
2013 (25)
2012 (19)
2010 (17)
2011 (16)
2026 (14)
2009 (13)
2008 (8)
2007 (3)
2003 (1)

Lab affiliation

Roswell Park Cancer Center Buffalo, NY, USA (2)
Department of Obstetrics and Gynecology, Inova Fairfax Medical Campus, Inova Health System (1)
Washington University, Department of Medicine, Division of Pulmonary and Critical Care (1)
Stoller Biomarker Discovery Centre, University of Manchester, United kingdom (1)
1 Department of Convergence Medicine, Asan Institute for Life Sciences, Asan Medical Center, Seoul 05505, Republic of Korea 2 Department of Biomedical Sciences, University of Ulsan College of Medicine, Seoul 05505, Republic of Korea 3 Clinical Proteomics Core Laboratory, Convergence Medicine Research Center, Asan Medical Center, Seoul 05505, Republic of Korea 4 Bio-Medical Institute of Technology, Asan Medical Center, Seoul 05505, Republic of Korea (1)
University of Connecticut (1)
1Department of Neurosurgery, Yale School of Medicine, New Haven, CT, USA. Department of Neurosurgery, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA (1)
Department of Food Safety and Environmental Health, University of Helsinki, Finland (1)
Associate Professor, Department of Laboratory Mediciene, UCSF (1)
Lab Head, UQ Diamantina Institute,The University of Queensland (1)
Department of Molecular and Medical Genetics, Oregon Health and Science University, Portland, OR USA (1)
Department of Ophthalmology, Yongin Severance Hospital, Yonsei University College of Medicine, Yongin, Korea (1)
Weill Cornell Medicine, Department of Biochemistry 1300 York Avenue, Box #63 Room A-108 New York, NY 10065 (1)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205 USA (1)
Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. Otto-Hahn-Straße 6b 44227 Dortmund, Germany P: +49 (0)2 31.13 92-100 F: +49 (0)2 31.13 92-200 www.isas.de (1)

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Identification and characterization of the flavin:NADH reductase (PrnF) involved in a novel two-component arylamine oxygenase.

Not available

S-EPMC2168932 | biostudies-literature

IL-10 prevents aging-associated inflammation and insulin resistance in skeletal muscle.

Not available

S-EPMC5240661 | biostudies-literature

The anti-proliferative effects of progestins in T47D breast cancer cells are tempered by progestin-induction of the ETS transcription factor Elf5.

Prolactin and progesterone act together to regulate mammary alveolar development, and both hormones have been implicated in breast cancer initiation and progression. Here we show that Elf5, a prolactin-induced ETS transcription factor that specifies the mammary secretory cell lineage, is also induce...

ORGANISM(S): Homo sapiens

2010-07-08 | E-GEOD-22363 | biostudies-arrayexpress

Condensing water vapor to droplets generates hydrogen peroxide.

Not available

S-EPMC7733789 | biostudies-literature

Investigation of cross-platform analytical precision in NMR and UPLC-MS based metabolic-phenotyping

Dataset of six samples of pooled human urine, aliquoted, and independently prepared and aquired by NMR spectroscopy, and UPLC-MS. Each source sample is seperatly prepared and assayed thirteen times. A pooled QC sample and independent external reference of a compariable matrix is also aquired to assi...

2018-08-31 | MTBLS694 | MetaboLights

Moderate alcohol intake reduces risk of ischemic stroke in Korea.

Not available

S-EPMC4664129 | biostudies-literature

Energy-stress-mediated AMPK activation inhibits ferroptosis

Energy stress depletes ATP and induces cell death. Here we identify an unexpected inhibitory role of energy stress on ferroptosis, a form of regulated cell death induced by iron-dependent lipid peroxidation. We found that ferroptotic cell death and lipid peroxidation can be inhibited by treatment...

2023-01-31 | MTBLS1399 | MetaboLights

90 min Met4 hyperactivation ChIP-chip

Identification of in vivo binding targets of Met4 and Met32 by conducting chromatin immunoprecipitation studies using genomic tiling arrays (ChIP-on-chip 4X44K whole yeast genome arrays by Agilent) following 90 minutes Met4 hyperactivation.

ORGANISM(S): Saccharomyces cerevisiae

2012-02-21 | E-MEXP-3302 | biostudies-arrayexpress

Single-cell and spatially resolved interactomics of tooth-associated keratinocytes in periodontitis.

Not available

S-EPMC11178863 | biostudies-literature

Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms

Dynamic environmental factors such as light, nutrients, salt, and temperature continuously affect chlorophototrophic microbial mats, requiring adaptive and acclimative responses to stabilize composition and function. Quantitative metabolomics analysis can provide insights into metabolite dynamics fo...

2024-02-23 | MTBLS187 | MetaboLights

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