Lee James J - OmicsDI

Show results for

Unknown (1085)
Genomics (149)
Transcriptomics (30)
Proteomics (28)
Metabolomics (12)

Organisms

Homo sapiens (164)
Alphavirus (15)
Archaea (15)
Bacteria (15)
Betaherpesvirinae (15)
Borrelia (15)
Botrytis cinerea (15)
Candida albicans (15)
Clostridium perfringens (15)
Eukaryota (15)
Fungi (15)
Hepatitis B virus (15)
Herpesvirales (15)
Human betaherpesvirus 5 (15)
Influenza A virus (15)
Influenza C virus (15)
Japanese encephalitis virus group (15)
Mammarenavirus (15)
Miscanthus x giganteus (15)
Mycobacterium tuberculosis (15)
Orthoflavivirus (15)
Panicum virgatum (15)
Mus musculus (9)
Saccharomyces cerevisiae (2)
Chlamydomonas reinhardtii (1)
Bos taurus (1)
Ovis aries (1)
Escherichia coli (1)
Rattus norvegicus (1)
Arabidopsis thaliana (1)

Repository

EGA (144)
biostudies-arrayexpress (35)
pride (15)
MetaboLights (12)
MassIVE (11)
jPOST (2)

Tissue

Brain (3)
Cell culture (3)
Early embryonic cell (1)
Embryonic stem cell (1)
Epididymal white adipose tissue (1)
Epithelial cell (1)
Heart (1)
Kidney (1)
Macrophage (1)

Disease

Ulcerative colitis (1)
Brain cancer (1)
COVID-19 (1)
Chlamydia trachomatis infectious disease (1)
Disease free (1)
Obesity (1)

Technology Type

Mass Spectrometry (15)
Mass spectrometry (10)
Illumina 15K (8)
Shotgun proteomics (7)
Affinity purification coupled with mass spectrometry proteomics (5)
Bottom-up proteomics (2)
Illumina OncoArray (1)
ABI_SOLID, Illumina HiSeq 2000, Illumina 450K, AB 5500xl Genetic Analyzer, AB 5500 Genetic Analyzer, ILLUMINA (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Illumina 1.2M, Affymetrix 6.0 (1)
Affymetrix 6.0 (1)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Mass spectrometry assay (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)

Instrument Platform

Orbitrap Fusion (3)
Orbitrap Fusion Lumos (2)
Q Exactive (2)
Exactive (Thermo Scientific) (2)
Liquid Chromatography MS - positive - reverse phase (2)
Illumina MiSeq (1)
Illumina HiSeq 4000 (1)
LTQ Orbitrap (1)
LTQ Orbitrap Elite (1)
Orbitrap Eclipse (1)
Q Exactive HF (1)
TripleTOF 6600 (1)
GCMS-QP2010 Plus (Shimadzu) (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
5975C Series GC/MSD (Agilent) (1)
API 5500 QTRAP (AB Sciex) (1)
API 4000 QTRAP (AB Sciex) (1)
Nuclear Magnetic Resonance (NMR) - (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2012 (8)
2018 (8)
2022 (7)
2014 (6)
2021 (6)
2015 (5)
2013 (5)
2016 (4)
2017 (3)
2025 (3)
2026 (3)
2019 (2)
2009 (2)
2008 (2)
2006 (2)
2024 (2)
2023 (2)
2011 (1)
2010 (1)
2007 (1)
2005 (1)

CHEBI ID

CHEBI:30769 (5)
CHEBI:16857 (4)
CHEBI:17568 (4)
CHEBI:15428 (4)
CHEBI:22660 (3)
CHEBI:28300 (3)
CHEBI:16708 (3)
CHEBI:25017 (3)
CHEBI:28044 (3)
CHEBI:17497 (3)
CHEBI:16704 (3)
CHEBI:15366 (3)
CHEBI:18257 (3)
CHEBI:17634 (3)
CHEBI:17821 (3)
CHEBI:17268 (3)
CHEBI:18019 (3)
CHEBI:16015 (3)
CHEBI:18012 (3)
CHEBI:22653 (3)
CHEBI:17084 (3)
CHEBI:16335 (3)
CHEBI:16199 (3)
CHEBI:17191 (3)
CHEBI:17895 (3)
CHEBI:17295 (3)
CHEBI:17544 (2)
CHEBI:12936 (2)
CHEBI:85753 (2)
CHEBI:85747 (2)

Metabolite Name

Citric acid (2)
Cytosine (2)
Xanthine (2)
Creatinine (2)
3-hydroxypentanoic acid (1)
S-adenosyl-methionine (1)
S-adenosyl-homocysteine (1)
Oxo Methionine (1)
N(4)-methylcytosine (1)
3-methylcytosine (1)
2-O-methylcytosine (1)
1-methylcytosine (1)
3PG (1)
D-sorbitol-1-13C m/z_320 (alt. m/z quant.) (1)
D-sorbitol-1-13C m/z_319 (alt. m/z quant.) (1)
D-sorbitol-1-13C m/z_206 (alt. m/z quant.) (1)
D-sorbitol-1-13C m/z_205 (alt. m/z quant.) (1)
D-sorbitol 13C6 m/z_322 (alt. m/z quant.) (1)
Saturated_Guanine manual (1)
Unknown_17.908, 1332, m/z 247 (1)
5-Hydroxyindole-3-acetic acid, 3 TMS, 35.49, 2212 (1)
Unkown_32.762, 2047, m/z 132 (1)
Mannitol, 6 TMS, 30.6, 1915 (alt. m/z quant. high dynamic range) (1)
D-(+)-Glucose, 5 TMS, MEOX, 30.38, 1902 (alt. m/z quant. high dynamic range) (1)
D-(+)-Galactose, 5 TMS, MEOX, 29.94, 1880 (alt. m/z quant. high dynamic range) (1)
Glutamic acid, 3 TMS, 24.79, 1623 (alt. m/z quant. high dynamic range) (1)
Serotonin, x TMS, 39.11, 2470 (alt. m/z quant. high dynamic range) (1)
D-(+)-Turanose, 7 TMS, 42.29, 2702 (1)
L-Lysine, 3 TMS, 26.54, 1712 (1)
L-Leucine, 2 TMS, 16.74, 1274 (1)

Study type

Transcription profiling by array (18)
RNA-seq of coding RNA (4)
Comparative genomic hybridization by array (3)
Other (3)
ChIP-seq (3)
Methylation profiling by high throughput sequencing (2)
Cell line - High-throughput sequencing (1)
MicroRNA profiling by array (1)

Release Date

2022 (128)
2021 (123)
2023 (120)
2024 (104)
2025 (88)
2020 (83)
2019 (64)
2015 (59)
2018 (59)
2014 (52)
2016 (47)
2017 (41)
2011 (34)
2012 (28)
2013 (26)
2026 (16)
2010 (15)
2009 (11)
2008 (11)
2007 (5)
2005 (4)
2006 (2)

Lab affiliation

Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA (1)
Department of Integrative Structural and Computational Biology, Scripps Research Institute (1)
Department of Neurology, UCLA (1)
James McGill Professor of Neurology and Neurosurgery and Anatomy and Cell Biology Montreal Neurological Institute-Hospital McGill, Montreal CANADA (1)
KEMRI Wellcome Trust Research Programme (1)
Maynooth University (1)
Maynooth University Department of Biology Maynooth University, Maynooth, Co. Kildare, Ireland. (1)
Michael Smith Laboratories, University of British Columbia, Canada (1)
Molecular and Cellular Biology Laboratory, Salk Institute for Biological Studies, La Jolla California 92037 USA (1)
Professor of Ophthalmology Massachusetts Eye and Ear Harvard Medical School 243 Charles Street Boston, MA 02148 (1)
School of Biochemistry, Biomedical Sciences Building, University Walk, University of Bristol, BS8 1TD, U.K. (1)
School of Life and Environmental Sciences, Charles Perkins Centre, Faculty of Science, The University of Sydney, NSW, Australia (1)
School of Life and Environmental Sciences, Charles Perkins Centre, University of Sydney, Australia (1)
University of Texas Southwestern Medical Center (1)
Wellcome Trust Sanger Institute (1)

Previous page
1 / 131
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 131
Next page

Sort by:

Relevance

Page size

Dialectical behavior therapy for justice-involved veterans (DBT-J): Feasibility and acceptability.

Not available

S-EPMC10481711 | biostudies-literature

Nature of interactions between PEO-PPO-PEO triblock copolymers and lipid membranes: (I) effect of polymer hydrophobicity on its ability to protect liposomes from peroxidation.

Not available

S-EPMC3689593 | biostudies-literature

Brown and beige adipose tissue regulate systemic metabolism through a metabolite interorgan signaling axis

Brown and beige adipose tissue are emerging as distinct endocrine organs. These tissues are functionally associated with skeletal muscle, adipose tissue metabolism and systemic energy expenditure, suggesting an interorgan signaling network. Using metabolomics, we identify 3-methyl-2-oxovaleric acid,...

2022-03-03 | MTBLS2436 | MetaboLights

Phase II Trial and Correlative Genomic Analysis of Everolimus Plus Bevacizumab in Advanced Non-Clear Cell Renal Cell Carcinoma.

Not available

S-EPMC5791841 | biostudies-literature

Self-Administration of Auricular Acupuncture in Rural Veterans with Chronic Pain: A Pilot Project.

Not available

S-EPMC8729899 | biostudies-literature

Dnj4HA AP-MS in Cryptococcus neoformans

Proteins which act as histone chaperones ensure genomic integrity during routine processes such as DNA replication and transcription as well as DNA repair upon damage. Herein, we identify a nuclear J domain protein, Dnj4, which interacts with histones 3 and 4 as well as Hsp71 as demonstrated in an A...

ORGANISM(S): Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) (Filobasidiella neoformans var. grubii)

2021-12-15 | PXD028087 | Pride

From Protocols to Publications: A Study in Selective Reporting of Outcomes in Randomized Trials in Oncology.

Not available

S-EPMC4979242 | biostudies-literature

Phase I Study of ATR Inhibitor M6620 in Combination With Topotecan in Patients With Advanced Solid Tumors.

Not available

S-EPMC5978471 | biostudies-literature

Why it is hard to find genes associated with social science traits: theoretical and empirical considerations.

Not available

S-EPMC3778125 | biostudies-literature

Endo_ASPHvariants_APMS_P124_6600

This dataset consists of 10 raw MS files and associated peak lists and results files, acquired on AB Sciex TripleTOF 6600 mass spectrometer operated in Data Dependent Acquisition mode. Samples were generated by Yukari Endo. Mass spectrometry acquisition and data analysis was performed by Cassandra ...

ORGANISM(S): Danio Rerio (ncbitaxon:7955) Homo Sapiens (ncbitaxon:9606)

2022-05-04 | MSV000089417 | MassIVE

Previous page
1 / 131
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 131
Next page

Sort by:

Relevance

Page size

1304 Results

Show results for

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

CHEBI ID

Metabolite Name

Study type

Release Date

Lab affiliation

OmicsDI is part of the ELIXIR infrastructure

Tweets