Lee N A NA - OmicsDI

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Unknown (1360)
Transcriptomics (133)
Proteomics (57)
Genomics (42)
Metabolomics (12)
Other (1)
Multiomics (1)

Organisms

Homo sapiens (97)
Mus musculus (56)
Rattus norvegicus (24)
Saccharomyces cerevisiae (10)
Arabidopsis thaliana (4)
Fusarium graminearum (3)
Schizosaccharomyces pombe (3)
Saccharomyces cerevisiae SK1 (2)
Corynebacterium glutamicum (2)
Caenorhabditis elegans (2)
Dehalococcoides (1)
Picea sitchensis (1)
Dehalobacter restrictus (1)
Macaca mulatta (1)
Lepidium sativum (1)
Apis mellifera (1)
Plasmodium falciparum 3D7 (1)
Oryza sativa (1)
Rattus rattus (1)
Mycobacterium tuberculosis (1)
Escherichia coli (1)
Gallus gallus (1)
Danio rerio (1)
Cryptococcus neoformans H99-vivo (1)
Macadamia (1)

Repository

biostudies-arrayexpress (152)
pride (43)
EGA (27)
MetaboLights (12)
MassIVE (11)
GPMDB (1)
iProX (1)

Tissue

Cell culture (8)
Liver (7)
Brain (5)
Prostate gland (3)
Blood platelet (2)
Epithelial cell (2)
Epithelial cell of prostate (2)
Hepatocyte (2)
Kidney (2)
Leaf (2)
Lung (2)
Myocardium (2)
Pancreas (2)
Placenta (2)
Testis (2)
Adrenal gland (1)
B-lymphocyte (1)
Blood cell (1)
Breast epithelial cell (1)
Breast epithelium (1)
Colon (1)
Colon epithelial cell (1)
Cotyledon (1)
Cytotoxic T-lymphocyte (1)
Esophagus (1)
Frontal lobe (1)
HEK-293 cell (1)
HEK-293T cell (1)
HeLa cell (1)
U2-OS cell (1)

Disease

Normal (3)
Prostate adenocarcinoma (3)
Prostate cancer (3)
Hepatocellular carcinoma-non tumorous region (1)
Spinal muscular atrophy (1)
Head and neck squamous cell carcinoma (1)
Not Available (1)
Alzheimer's disease (1)
Bacterial sepsis (1)
Colon cancer (1)
Disease free (1)
Malignant neoplasm of ovary (1)
Parkinson's disease (1)
Pulmonary neuroendocrine tumor (1)
Sarcoma (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (43)
Shotgun proteomics (32)
Mass spectrometry (12)
Illumina 15K (8)
Bottom-up proteomics (6)
Affinity purification coupled with mass spectrometry proteomics (3)
Data-dependent acquisition (2)
Gel-based experiment (2)
SWATH MS (2)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
ILLUMINA, NextSeq 500, HiSeq X Ten (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
Illumina HiSeq 2500 (3)
Orbitrap Fusion Lumos (3)
Illumina HiSeq 4000 (2)
LTQ Orbitrap Elite (2)
Q Exactive (2)
Liquid Chromatography MS - negative - reverse phase (2)
Using NEBNext Ultra II DNA Library (1)
-- (1)
Axon GenePix 4000B scanner (1)
Illumina HiSeq (1)
Nanodrop N1000 spectrophotometer (1)
GenePix 4000B [Axon Instruments] (1)
Scanning hardware (1)
Illumina NovaSeq X (1)
Illumina HiSeq 1500 (1)
Illumina NovaSeq 6000 (1)
Instrument (1)
LTQ (1)
LTQ FT (1)
LTQ Orbitrap (1)
LTQ Orbitrap Velos (1)
LTQ Orbitrap Velos Pro (1)
Orbitrap Fusion ETD (1)
API 4000 QTRAP (AB Sciex) (1)
Agilent5975C (1)
Exactive (Thermo Scientific) (1)
GC色Agilent 7890A, Agilent ,LECOChroma TOF PEGASUS HT, LECO (1)
Liquid Chromatography MS - - reverse phase (1)
Liquid Chromatography MS - alternating - hilic (1)

Publication Date

2013 (25)
2014 (21)
2016 (17)
2010 (15)
2005 (15)
2023 (13)
2015 (11)
2009 (11)
2021 (10)
2012 (10)
2006 (10)
2024 (9)
2026 (8)
2020 (8)
2019 (8)
2025 (6)
2011 (6)
2008 (6)
2007 (4)
2018 (3)
2017 (2)
2022 (1)

CHEBI ID

CHEBI:16811 (6)
CHEBI:28300 (6)
CHEBI:18186 (5)
CHEBI:24898 (5)
CHEBI:25094 (5)
CHEBI:26986 (5)
CHEBI:27897 (5)
CHEBI:28044 (5)
CHEBI:15741 (4)
CHEBI:16335 (4)
CHEBI:16449 (4)
CHEBI:16551 (4)
CHEBI:16704 (4)
CHEBI:16708 (4)
CHEBI:16865 (4)
CHEBI:17596 (4)
CHEBI:17822 (4)
CHEBI:18237 (4)
CHEBI:22653 (4)
CHEBI:22660 (4)
CHEBI:25017 (4)
CHEBI:27266 (4)
CHEBI:27570 (4)
CHEBI:30887 (4)
CHEBI:15428 (3)
CHEBI:15611 (3)
CHEBI:15725 (3)
CHEBI:15727 (3)
CHEBI:15756 (3)
CHEBI:15940 (3)

Metabolite Name

4-aminobutyric acid (3)
Alanine (3)
Fructose (3)
Glutamine (3)
Isoleucine (3)
Methionine (3)
Proline (3)
Trehalose (3)
Valine (3)
1,5-Anhydroglucitol (2)
3-Hydroxypropionic acid (2)
3-Methylamino-1,2-propanediol (2)
Biuret (2)
D-(glycerol 1-phosphate) (2)
D-Glyceric acid (2)
Eicosane (2)
Erythrose (2)
Ethanolamine (2)
Galactinol (2)
Galactose (2)
Glucosaminic acid (2)
Glucose-1-phosphate (2)
Glycine (2)
Isocitric acid (2)
Itaconic acid (2)
L-Threose (2)
Lysine (2)
Phenylalanine (2)
Pyroglutamic acid (2)
Serine (2)

Study type

Transcription profiling by array (76)
RNA-seq of coding RNA (15)
ChIP-seq (14)
Comparative genomic hybridization by array (7)
Methylation profiling by array (7)
ChIP-chip by array (6)
ChIP-chip by tiling array (5)
Transcription profiling by tiling array (3)
Unknown experiment type (2)
Transcription profiling by RT-PCR (2)
Other (2)
RNA-seq of non coding RNA (2)
Animal - One-color microarray (1)
Plant - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
Proteomic profiling by mass spectrometer (1)
Genotyping by array (1)
MicroRNA profiling by array (1)
Proteomic profiling by array (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2021 (170)
2022 (156)
2025 (151)
2024 (141)
2020 (137)
2023 (116)
2018 (111)
2019 (89)
2015 (57)
2016 (54)
2014 (54)
2017 (52)
2013 (42)
2010 (30)
2012 (28)
2011 (24)
2009 (24)
2026 (23)
2008 (17)
2005 (15)
2006 (11)
2007 (8)
2002 (1)
2001 (1)

Lab affiliation

Kyungpook national university (4)
The University of Sydney (3)
Department of Biological Sciences, Seoul National University, Seoul, Republic of Korea (2)
The University of Melbourne (2)
ARC Training Centre for Advanced Technologies in Food Manufacture, School of Chemical Engineering, UNSW SYDNEY, NSW 2052, AUSTRALIA (1)
BK21 Plus KNU Multi-Omics Based Creative Drug Research Team, College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University (1)
BK21 Plus KNU Multi-Omics based Creative Drug Research Team, College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University, Republic of Korea (1)
Center for RNA Research, Institute for Basic Science, Seoul 08826, S. Korea School of Biological Sciences, Seoul National University, Seoul 08826, S. Korea (1)
College of Pharmacy and Research Institute of Pharmaceutical Sciences, Kyungpook National University, Daegu 41566, Republic of Korea (1)
College of Pharmacy, Kyungpook National University (1)
David Geffen School of Medicine, University of California, Los Angeles, CA 90095 Department of Molecular and Medical Pharmacology, Jonsson Comprehensive Cancer Center, Institute for Molecular Medicine, California NanoSystems Institute (1)
Department of Applied Chemistry College of Applied Sciences, Kyung Hee University Yong-in City, 446-701 Republic of Korea (1)
Department of Biochemistry University of Cambridge (1)
Department of Biochemistry and Molecular Biology, University of Calgary, Alberta, Canada; Department of Physiology and Pharmacology, University of Calgary, Alberta, Canada; The Hotchkiss Brain Institute, University of Calgary, Alberta, Canada; McCaig Institute for Bone and Joint Health, University of Calgary, Alberta, Canada. (1)
Department of Life Sciences, Pohang University of Science and Technology, Pohang 790-784, Republic of Korea (1)
Department of New Biology, DGIST, Daegu 42988, Republic of Korea (1)
Department of Plant Biology, Carnegie Institution for Science, Stanford, California, USA (1)
Department of Radiation Oncology, School of Medicine and the Winship Cancer Institute, Emory University (1)
Division of Applied Functional Genomics, German Cancer Research Center (DKFZ) and National Center for Tumor Diseases (NCT), NCT Heidelberg, Germany (1)
Drug & Disease Target Team, Division of Bioconvergence Analysis, Korea Basic Science Institute (KBSI), Cheongju 28119, Republic of Korea (1)
Korea Institute of Science and Technology (1)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205 USA (1)
Medicine, University of California San Francisco (1)
Molecular and Medical Pharmacology / Crump Institute for Molecular Imaging (1)
Professor, Department of Laboratory Medicine and Pathology Center for Individualized Medicine, Mayo Clinic (1)
QBI Director and Professor in Cellular and Molecular Pharmacology, UCSF (1)
School of Pharmacy, Sungkyunkwan University, Suwon 16419, Republic of Korea (1)
The Institute of Cancer Research (1)
The University of Texas at Austin (1)
The Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland 21287 USA (1)

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Comparative genomic hybridization of human NA, NP1, NR1, NR15 cells denoting different re-activiations of EBV to investigate the effect of highly recurrent EBV reactivation on genetic copy number alterations

We proposed that the frequency of EBV reactivation may be crucial for its pathogenic role and highly recurrent EBV reactivations exert a profound influence on genome instability. Recurrent reactivations were induced in the EBV-latently infected NPC cells (NA cells) by treating with 12-o-tetradecanoy...

ORGANISM(S): Homo sapiens

2008-06-14 | E-GEOD-6472 | biostudies-arrayexpress

A metabolic switch orchestrated by IL-18 and the cyclic dinucleotide cGAMP programs intestinal tolerance

Tissues are exposed to diverse inflammatory challenges that shape future inflammatory responses. While cellular metabolism regulates immune function, how metabolism programs and stabilizes immune states within tissues and tunes susceptibility to inflammation is poorly understood. Here, we describe a...

2024-10-25 | MTBLS10416 | MetaboLights

MetaboKit: a comprehensive data extraction tool for untargeted metabolomics (Mouse liver assays)

We have developed MetaboKit, a comprehensive software package for compound identification and relative quantification in mass spectrometry-based untargeted metabolomics analysis. In data dependent acquisition (DDA) analysis, MetaboKit constructs a customized spectral library with compound identit...

2021-11-02 | MTBLS1266 | MetaboLights

Inhibition of Na+/H+ exchanger (NHE) 7 by 5-(N-ethyl-N-isopropyl)-Amiloride displays anti-cancer activity in non-small cell lung cancer by disrupting cancer stem cell activity and downregulating PD-L1 expression.

Not available

S-EPMC10636675 | biostudies-literature

MetaboKit: a comprehensive data extraction tool for untargeted metabolomics (Standard mixture assay)

2021-11-05 | MTBLS1311 | MetaboLights

Identification and neuroprotective properties of NA-184, a calpain-2 inhibitor.

Not available

S-EPMC10907882 | biostudies-literature

A Hierarchically Ordered Mesoporous-Carbon-Supported Iron Sulfide Anode for High-Rate Na-Ion Storage.

Not available

S-EPMC8307886 | biostudies-literature

A substructure-based screening approach to uncover N-nitrosamines in drug substances.

Not available

S-EPMC9931005 | biostudies-literature

Mapping Clinical and Expression QTL in a Sex-Dependent Effect of Host Susceptibility to Influenza H3N2/HK/1/68-MA20

Seasonal influenza outbreaks and recurrent influenza pandemics present major challenges to public health. By studying immunological responses to influenza in different host species, it may be possible to discover common mechanisms of susceptibility in response to various influenza strains. This coul...

ORGANISM(S): Mus musculus

2012-05-01 | E-GEOD-35888 | biostudies-arrayexpress

Identification of Metabolites and Transcripts Involved in Salt Stress and Recovery in Peanut

Peanut (Arachis hypogaea L.) is considered as a moderately salt-sensitive species and thus soil salinity can be a limiting factor for peanut cultivation. To gain insights into peanut plant physiology in response to salt stress and alleviation, we comprehensively characterized leaf relative electroly...

2019-03-19 | MTBLS583 | MetaboLights

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