Lee S-J SJ - OmicsDI

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Unknown (3048)
Genomics (48)
Proteomics (40)
Transcriptomics (14)
Metabolomics (8)

Organisms

Homo sapiens (76)
Mus musculus (12)
Zea mays (3)
Rattus norvegicus (3)
Staphylococcus aureus (2)
Helicobacter pylori (1)
Arabidopsis thaliana (1)
Chlorocebus sabaeus (1)
Daphnia pulex (1)
Dengue virus (1)
Escherichia coli (1)
Pseudomonas aeruginosa (1)

Repository

EGA (43)
pride (37)
biostudies-arrayexpress (19)
MetaboLights (8)
MassIVE (2)
PanoramaPublic (1)

Tissue

Cell culture (7)
Brain (5)
Epithelial cell (4)
Liver (4)
Blood plasma (3)
Kidney (3)
Blood cell (2)
Permanent cell line cell (2)
Blood (1)
Blood platelet (1)
Cardiac muscle cell (1)
Early embryonic cell (1)
Embryonic stem cell (1)
Fibroblast (1)
Granule cell (1)
HUVEC cell (1)
Heart (1)
Kidney field (1)
Lung (1)
Monocyte (1)
Neoplastic (1)
Neutrophil (1)
Platelet (1)
Pluripotent stem cell (1)
Primary cell (1)
Prostate cancer cell line (1)
Purkinje cell (1)
Skin (1)
Stem cell (1)

Disease

Brain glioblastoma multiforme (2)
COVID-19 (2)
Gray platelet syndrome (2)
Breast cancer (1)
Charcot-Marie-Tooth disease (1)
Chronic kidney disease (1)
Disease free (1)
Hepatitis (1)
Hydrocephalus (1)
Mixed disorder as reaction to stress (1)
Ogden syndrome (1)
Spinal muscular atrophy (1)
Urinary bladder cancer (1)

Technology Type

Mass Spectrometry (37)
Shotgun proteomics (22)
Illumina 15K (8)
Mass spectrometry (8)
Affinity purification coupled with mass spectrometry proteomics (5)
Bottom-up proteomics (5)
Gel-based experiment (2)
Affymetrix 6.0 (1)
Illumina 1.2M, Affymetrix 6.0 (1)
Illumina OncoArray (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)
HDMSE (1)
Mass spectrometry imaging (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (3)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - negative - reverse phase (2)
LTQ FT (1)
Orbitrap Fusion Lumos (1)
Q Exactive Plus (1)
5975C Series GC/MSD (Agilent) (1)
6460 Triple Quadrupole LC/MS (Agilent) (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - - hilic (1)
Liquid Chromatography MS - - reverse phase (1)
LTQ XL (ICN) (1)
Thermo Finnigan LTQ XL (1)

Publication Date

2021 (8)
2023 (8)
2025 (7)
2020 (6)
2013 (5)
2022 (4)
2015 (3)
2014 (3)
2009 (3)
2017 (3)
2019 (3)
2016 (3)
2018 (2)
2012 (1)
2008 (1)
2007 (1)
2006 (1)
2005 (1)
2026 (1)
2024 (1)
2011 (1)

CHEBI ID

CHEBI:16027 (3)
CHEBI:16108 (3)
CHEBI:16610 (3)
CHEBI:17148 (3)
CHEBI:18012 (3)
CHEBI:48928 (3)
CHEBI:15422 (2)
CHEBI:15741 (2)
CHEBI:15978 (2)
CHEBI:16196 (2)
CHEBI:16856 (2)
CHEBI:17138 (2)
CHEBI:17351 (2)
CHEBI:18127 (2)
CHEBI:18237 (2)
CHEBI:22653 (2)
CHEBI:22660 (2)
CHEBI:25017 (2)
CHEBI:25094 (2)
CHEBI:28013 (2)
CHEBI:28044 (2)
CHEBI:28300 (2)
CHEBI:28822 (2)
CHEBI:28842 (2)
CHEBI:29016 (2)
CHEBI:30769 (2)
CHEBI:30887 (2)
CHEBI:30915 (2)
CHEBI:32816 (2)
CHEBI:422 (2)

Metabolite Name

AMP (3)
ATP (2)
Citrate (2)
D-Glucose (2)
Fumarate (2)
Spermidine (2)
Stearic acid (2)
(-)-pinellic acid (1)
(.+/-.)-Tartaric acid (1)
(1S,3R,5Z,7E,22E)-9,10-Secoergosta-5,7,10,22-tetraene-1,3,25,28-tetrol (1)
(20Z)-17-Oxo-20-hexacosenoic acid (1)
(2S)-1-Hydroxy-3-(pentadecanoyloxy)-2-propanyl (9Z)-9-hexadecenoate (1)
(2S)-3-Hydroxy-2-(octanoyloxy)propyl decanoate (1)
(2xi)-D-gluco-heptonic acid (1)
(3beta,5xi,9xi)-Urs-12-en-3-yl palmitate (1)
(3r,4s)-Tofacitinib (1)
(5xi)-11,12-Dihydroxyabieta-8(14),9(11),12-trien-20-oic acid (1)
.alpha.-Glucoheptitol (1)
1,1'-[1,11-Undecanediylbis(oxy)]dibenzene (1)
1,2-dioleoyl-sn-glycero-3-phospho-(1'-sn-glycerol) (1)
1,2-dioleoyl-sn-glycero-3-phospho-N,N-dimethylethanolamine (1)
1,3-Dihydroxy-2-propanyl (15Z)-15-tetracosenoate (1)
1,3-Dihydroxy-2-propanyl tetracosanoate (1)
1,3-diaminopropane (1)
1-(9Z-octadecenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) (1)
1-(Decanoyloxy)-3-(octanoyloxy)-2-propanyl tridecanoate (1)
1-Eicosadienoyl-2-docosahexaenoyl-sn-glycero-3-phosphoethanolamine (1)
1-Methylnicotinamide (1)
1-Palmitoyl-2-hydroxy-sn-glycero-3-PE (1)
1-arachidoyl-2-arachidonoyl-sn-glycero-3-phosphate (1)

Modification

15.994915 (1)
57.021464 (1)

Study type

Transcription profiling by array (7)
ChIP-seq (4)
RNA-seq of coding RNA (4)
Comparative genomic hybridization by array (2)
Other (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (340)
2022 (337)
2024 (325)
2021 (317)
2023 (301)
2020 (249)
2019 (200)
2018 (166)
2015 (144)
2017 (137)
2016 (126)
2014 (102)
2013 (78)
2012 (57)
2026 (53)
2011 (38)
2009 (35)
2010 (27)
2008 (19)
2007 (7)
2006 (6)
2005 (2)
2004 (1)

Lab affiliation

College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University (2)
Department of Life Sciences, Pohang University of Science and Technology (POSTECH), Pohang, Republic of Korea (2)
1Department of Neurosurgery, Yale School of Medicine, New Haven, CT, USA. Department of Neurosurgery, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA (1)
BK21 Plus KNU Multi-Omics-based Creative Drug Research Team, College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University, Republic of Korea (1)
Biochemistry and Molecular Biology, Michael Smith Laboratories, University of British Columbia (1)
Center for Genomic Integrity, Institute for Basic Science, Ulsan, Korea (1)
Center for Theragnosis, Korea Institute of Science and Technology, Seoul, Korea (1)
College of Pharmacy, Kyungpook National University, 80 Daehak-ro, Buk-gu, Daegu 41566 Korea (1)
Department of Applied Chemistry, Institute of Natural Science, Global Center for Pharmaceutical Ingredient Materials, Kyung Hee University, Yongin, Republic of Korea; Department of Biomedical Science and Technology, Kyung Hee Medical Science Research Institute, Kyung Hee University, Seoul, Republic of Korea. (1)
Department of Biotechnology, College of Life Science and Biotechnology, Korea University, Seoul, Republic of Korea (1)
Department of Chemistry and Biochemistry, The University of Texas at Dallas (1)
Department of Chemistry, Korea university (1)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (1)
Department of Life Science (1)
Department of Medicine, Weill Cornell Medicine, New York, NY, USA (1)
Department of Neurology, UCLA (1)
Department of Pharmacology and Toxicology University of Texas Medical Branch Galveston, TX 77555 USA (1)
Department of Radiology Canary Center at Stanford for Cancer Early Detection Stanford School of Medicine Stanford University (1)
Department of Structural Biology, St. Jude Children’s Research Hospital, Memphis, TN 38105, USA Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany (1)
Institute of Structural and Molecular Biology, Division of Biosciences, University College London, London, United Kingdom (1)
James McGill Professor of Neurology and Neurosurgery and Anatomy and Cell Biology Montreal Neurological Institute-Hospital McGill, Montreal CANADA (1)
Korea Institute of Science and Technology, Seoul, Republic of Korea. (1)
L7235, Center for Theragnosis, Korea Institute of Science and Technology, Republic of Korea (1)
Laboratory Head The Walter and Eliza Hall Institute of Medical Research 1G Royal Parade Parkville Victoria 3052 Australia (1)
Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. Otto-Hahn-Straße 6b 44227 Dortmund, Germany P: +49 (0)2 31.13 92-100 F: +49 (0)2 31.13 92-200 www.isas.de (1)
Mass Spectrometry Facility, Department of Biochemistry and Molecular Biology, University of Texas Medical Branch at Galveston, USA (1)
Murdoch Children's Research Institute, Melbourne, Australia (1)
Proteomics and Metabolomics Core Facility, Biomedical Research Institute, Seoul National University Hospital (1)
School of Life and Environmental Sciences, Charles Perkins Centre, University of Sydney, Australia (1)
Seoul National University, College of Medicine (1)

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Targeting RAF Isoforms and Tumor Microenvironments in RAS or BRAF Mutant Colorectal Cancers with SJ-C1044 for Anti-Tumor Activity.

Not available

S-EPMC10378394 | biostudies-literature

Effective control of neuropathic pain by transient expression of hepatocyte growth factor in a mouse chronic constriction injury model.

Not available

S-EPMC6113864 | biostudies-literature

Comparative genomic hybridization of pre- and post-mouse H. pylori strains SS1 and SS2000

This experiment set contains the raw data for 8 arrays that were used in the genomic typing of the pre- and post-mouse H. pylori strains SS1 and SS2000. 10700 is the pre-mouse clinical isolate of SS1 and PMSS2000 is the pre-mouse clinical isolate of SS2000. gDNA from these strains were labeled and h...

ORGANISM(S): Helicobacter pylori

2005-11-03 | E-SMDB-1734 | biostudies-arrayexpress

Catch-up sleep on free days and body mass index: results from the seventh Korea National Health and Nutrition Examination Survey, 2016.

Not available

S-EPMC10758546 | biostudies-literature

Tetraspanin-2 promotes glucotoxic apoptosis by regulating the JNK/β-catenin signaling pathway in human pancreatic β cells.

Not available

S-EPMC5001516 | biostudies-literature

Data on combination effect of PEG-coated gold nanoparticles and non-thermal plasma inhibit growth of solid tumors.

Not available

S-EPMC5026707 | biostudies-literature

Coenzyme Q₁₀ alleviates tacrolimus-induced mitochondrial dysfunction in kidney.

Not available

S-EPMC6902707 | biostudies-literature

Staphylococcus aureus RN4220 wild-type extracellular vesicle proteome

Bacteria actively secrete extracellular vesicles (EVs), spherical nano-sized proteolipids into the extracellular milieu. Bacterial EVs have gained wide interests as non-living complex vaccines or delivery vehicles. However, no studies have used bacterial EVs in treating cancer so far. Our results sh...

ORGANISM(S): Staphylococcus aureus

2018-11-22 | PXD006913 | Pride

Escherichia coli msbB-deficient mutant extracellular vesicle proteome

ORGANISM(S): Escherichia coli

2018-11-22 | PXD006912 | Pride

Exosomes Escherichia coli Extracellular vesicles Outer membrane vesicles Bacteria

Systematic evaluation and modulation of HLA class I downregulation in Merkel cell carcinoma

Lee PC, Klaeger S, Le PM, Korthauer K, Cheng J, Wong A, Tarren A, Lemvigh C, Sarkizova S, Li L, Frost TC, Nomburg J, Liu X, Pomerance L, Doherty L, Witten E, Zhang W, Apffel A, Wallace L, Neuberg D, Olsen L, Thakuria M, Clauser K, Starrett G, Doench J, Buhrlage SJ, Carr SA, DeCaprio JA, Wu CJ, Keski...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2021-04-20 | MSV000087251 | MassIVE

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3158 Results

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