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ProteomicsIdentification of interacting proteins of lncRNA HIF1α-AS1
LncRNA Hypoxia-inducible factor 1α-antisense 1 (HIF1α-AS1) is located on the antisense strand of the important Hypoxia-inducible factor 1α (HIF1α) gene, but being transcribed in antisense direction along the HIF1α promoter. Here we used the 3’end biotinylated HIF1a-AS1 RNA and a control RNA for RNA ...
ORGANISM(S): Homo sapiens (Human) 
2022-09-23 | PXD023512 | Pride
Interacting proteins Lncrna Lc-msms 
ProteomicsInteracting proteins on lncRNA SMANTIS in THP-1 cells
The lncRNA SMANTIS (formerly known as MANTIS, AK125871, n342419) functions as a regulator of cell function in endothelial cells and for adhesion to monocytes. Here, we investigated the function of SMANTIS in THP-1 monocytes. By using an antisense oligonucleotide pulldown approach followed by LC/MS, ...
ORGANISM(S): Homo sapiens (Human) 
2025-01-07 | PXD048847 | Pride
Monocytes Complex remodeling Lncrna Protein-rna complexes 
ProteomicsEndothelial protein interaction partners of the lncRNA PCAT19
PCAT19 is an endothelial-enriched lncRNA that contributes to the proliferation-quiescence switch in a cell density-dependent manner. Here we performed an antisense-oligonucleotide pulldown of the PCAT19 lncRNA followed by mass spectrometry to identify protein interaction partners of PCAT19. Interact...
ORGANISM(S): Homo sapiens (Human) 
2022-09-29 | PXD032669 | Pride
Pcat19 Proteome Lncrna Cell cycle Endothelial 
ProteomicsSILAC-based quantitative Nox4-Co-immunoprecipitation
Within the family of NADPH oxidases, Nox4 is unique as it is predominantly localized in the endoplasmic reticulum, has constitutive activity and generates H2O2. We hypothesize that these features are consequences of a so far unidentified Nox4-interacting protein. Interacting proteins were screened ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-29 | MSV000080772 | MassIVE
UnknownADPGK-AS1 long noncoding RNA switches macrophage metabolic and phenotypic state to promote lung cancer growth
Not available
S-SCDT-10_15252-EMBJ_2022111620 | biostudies-other
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