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MetabolomicsMetabolomic analysis of alfalfa (Medicago sativa L.) root-symbiotic rhizobia responses under alkali stress
Alkaline salts (e.g., NaHCO3 and Na2CO3) causes more severe morphological and physiological damage to plants than neutral salts (e.g., NaCl and Na2SO4) due to differences in pH. The mechanism by which plants respond to alkali stress is not fully understood, especially in plants having symbotic relat...
2018-07-27 | MTBLS481 | MetaboLights
TranscriptomicsA global analysis of QTLs for expression variations in rice shoot at early seedling stage
Analyses of QTLs for expression levels (eQTLs) of the genes reveal genetic relationship between expression variation and the regulator, thus unlocking the information for identifying the regulatory network. Oligo-nucleotide expression microarrays hybridized with RNA can simultaneously provide data f...
ORGANISM(S): Oryza sativa Indica Group 
2011-06-24 | E-GEOD-22564 | biostudies-arrayexpress
ProteomicsProteome of mouse brain and liver tissues
LC-MS/MS analysis for protein quantification of mouse brain and liver tissues
ORGANISM(S): Mus musculus (Mouse) 
2021-05-18 | PXD025201 | Pride
Brain Mouse Liver 
TranscriptomicsA global analysis of QTLs for expression variations in rice flag leaf at heading date
Analyses of QTLs for expression levels (eQTLs) of the genes reveal genetic relationship between expression variation and the regulator, thus unlocking the information for identifying the regulatory network. In this study, we used Affymetrix GeneChip Rice Genome Array to analyze eQTLs in rice flag le...
ORGANISM(S): Oryza sativa 
2014-02-05 | E-GEOD-49020 | biostudies-arrayexpress
ProteomicsQuantitative Proteomic Atlas of Ubiquitination in Hepatocellular Carcinoma
Ubiquitination plays a critical role in human hepatocellular carcinoma (HCC) genesis and metastasis, but how these processes affect systemic ubiquitinome still remains unclear. In this study, our dataset of around 12,000 diGly modified sites was identified providing a valuable insight into HCC. We f...
ORGANISM(S): Homo Sapiens 
PXD011895 |
ProteomicsQuantitative proteomic data of hepatocellular carcinoma
Ubiquitination plays a critical role in human cancer genesis and metastasis, but how the systemic ubiquitinome changes during these processes remains unclear. In this study, our dataset of approximately 12,000 identified ubiquitinated sites provided valuable insight into human hepatocellular carcino...
ORGANISM(S): Homo Sapiens 
2020-04-16 | PXD018593 |
ProteomicsIntegrative proteomics of macrophage in response to LPS stimulation
PTM proteomics had been increasingly used in studies related to inflammation and immunity, but the integrated analysis of multiple PTM was lacking. Here, we integrated WCP, acetylome, phosphoproteome and ubiquitinome datasets to identify LPS stimulation-dependent PTM events in macrophages with or wi...
ORGANISM(S): Homo Sapiens Mus Musculus 
2019-09-20 | PXD015527 |
ProteomicsA collection of transcriptomic and proteomic datasets from sesame in response to salt stress
The proteome profiles in the shoots of two sesame genotypes with contrasting salinity tolerance were investigated under saline condition using an iTRAQ-based quantitative proteomics approach.
ORGANISM(S): Sesamum Indicum 
2019-03-08 | PXD013013 |
ProteomicsCellular and Comparative Proteomic Analyses Reveal Developmental Differences in Anthers at Meiosis between Diploid and Autotetraploid Rice
Newly synthetic autotetraploid rice generally shows lower pollen fertility and seed setting rate in comparison to diploid rice, and this can hinder its own domestication and breeding. In this study, cytological analysis was used to demonstrate the imbalanced separation of homologous chromosomes occu...
ORGANISM(S): Oryza Sativa 
PXD033183 |
ProteomicsTMT proteomics analysis of cerebrospinal fluid from patients with cerebral venous sinus thrombosis
In the present study, we detected the alterations of the CSF protein spectrum of CVST patients by TMT technique, screen differentially expressed proteins, analyze the functions of these signals through bioinformatics methods, and finally validate the key molecules through parallel reaction monitorin...
ORGANISM(S): Homo Sapiens 
2022-11-22 | PXD038259 |
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