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TranscriptomicsTranscription profiling of Arabidopsis NFYA5 mutant vs wild type
NFYA5 is a transcription factor important for drought resistance. Drought stress up-regulates NFYA5 gene expression not only at the transcriptional level but also at the posttranscriptional level by down-regulating the expression of miR169a that targets NFYA5 transcript for cleavage. Experiment Ove...
ORGANISM(S): Arabidopsis thaliana 
2008-10-21 | E-GEOD-12029 | biostudies-arrayexpress
ProteomicsReciprocal regulation of the TOR kinase and ABA receptor balances plant growth and stress response
We found that TOR kinase regulates the plant environmental stress responses through phosphorylation at a conserved serine residue of Abscisic acid receptor PYR1/PYLs/RCARs. The phosphorylation inhibits the function of PYLs and prevents the binding of PYLs to abscisic acid and its downstream substrat...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2017-12-01 | PXD003746 | Pride
Snrk2 Aba receptor Raptor Abscisic acid Target of rapamycin Phosphorylation 
GenomicsWhole genome bisulfite sequencing of idm1, rdd, ros1 mutants and Col-0 WT
Using whole genome bisulfite sequencing to provide single-base resulution of DNA methylation status in ros1, idm1, and rdd mutants and identify hypermethylated regions comparing to wild type Arabidopsis plants. Examination of 3 different mutants' methylome. 8 samples (3 mutants, 1 WT, each has two b...
ORGANISM(S): Arabidopsis thaliana 
2012-06-17 | E-GEOD-33071 | biostudies-arrayexpress
TranscriptomicsMeDIP-chip of zdp mutant
Using meDIP-chip to provide methylation profile in zdp mutant and identify hypermethylated regions comparing to wild type Arabidopsis plants. Examination of zdp mutant's methylome. 4 samples(1 mutant, 1 WT, each has two biological replicates)
ORGANISM(S): Arabidopsis thaliana 
2012-03-20 | E-GEOD-33719 | biostudies-arrayexpress
UnknownIntegrative annotation of variants from 1092 humans: application to cancer genomics.
Not available
S-EPMC3947637 | biostudies-literature
UnknownIntegrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel.
Not available
S-EPMC4338501 | biostudies-literature
UnknownA global reference for human genetic variation.
Not available
S-EPMC4750478 | biostudies-literature
UnknownAn integrated map of genetic variation from 1,092 human genomes.
Not available
S-EPMC3498066 | biostudies-literature
UnknownMapping copy number variation by population-scale genome sequencing.
Not available
S-EPMC3077050 | biostudies-literature
UnknownThe functional spectrum of low-frequency coding variation.
Not available
S-EPMC3308047 | biostudies-literature
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