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MetabolomicsStage-specific roles of microbial dysbiosis and metabolic disorders in rheumatoid arthritis

OBJECTIVE: Rheumatoid arthritis (RA) is a progressive disease including four stages, where gut microbiome is associated with pathogenesis. We aimed to investigate stage-specific roles of microbial dysbiosis and metabolic disorders in RA.

METHODS: We investi...

2023-01-31 | MTBLS5297 | MetaboLights
TranscriptomicsRNA-Seq of fibrosarcoma cell lines from wild-type and Tnfaip8 knockout mice
Fibrosarcoma cell lines were generated from wild-type and Tnfaip8 knockout mice. After stimulation with vehicle, LPA, or PDGF, RNAs were collected from the cells afterwards for RNA-Seq.
ORGANISM(S): Mus musculus 
2023-01-01 | E-MTAB-10468 | biostudies-arrayexpress
ProteomicsPhosphorylated 4D-Label-free quantitative proteome
The quantitative phosphoprotemic of pad4-1 and bon123pad4-1 before and after Brassinosteroids treatment
ORGANISM(S): Arabidopsis Thaliana 
2024-02-12 | PXD038831 |
ProteomicsArtificial warming affects sugar signals and flavonoid accumulation to improve female willows growth faster than males
Warming posed a significant effect to plant growth. Dioecious species were especially vulnerable to warming climate given that they often exhibited a series of gender- specific physiological and morphological responses.Here, we conducted a controlled growth chamber experiments by using a female-bias...
ORGANISM(S): Salix Paraplesia 
PXD043259 |
ProteomicsProtein expression of Rhodopseudomonas palustris CGA009 during anaerobic nitrogen fixation or non nitrogen fixation
Rhodopseudomonas palustris CGA009 grown anaerobic in photosynthetic medium (PM) or Nitrogen-fixing medium (NFM)
ORGANISM(S): Rhodopseudomonas Palustris Cga009 
PXD042610 |
ProteomicsLabel-free proteome analysis of small extracellular vesicles (sEV) expressing different HRS mutants.
Label-free proteome analysis of small extracellular vesicles (sEV) derived from WM9 cells expressing different HRS mutants: wild type (HRSWT), phospho-deficient (HRSS345A), and phospho-mimetic mutant HRS (HRSS345D).
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2022-02-16 | MSV000088846 | MassIVE
ProteomicsAmelioration of nonalcoholic fatty liver disease by inhibiting the deubiquitylating enzyme RPN11
Nonalcoholic fatty liver disease (NAFLD) including its more severe manifestation, nonalcoholic steatohepatitis (NASH), is a global public health challenge. Here, we reveal a role for the deubiquitinating enzyme RPN11 in the development of NAFLD and NASH. Ablation of hepatic RPN11 markedly protected ...
ORGANISM(S): Homo Sapiens Mus Musculus 
PXD053163 |
ProteomicsDifferential Membrane Protein Profile in Sperm
We investigated the differential expression of the total membrane proteins of the two sperm types by using high-purity X- and Y-sperm from 20 Holstein bulls and applying the label-free proteomic technique.
ORGANISM(S): Bos Taurus 
PXD019435 |
ProteomicsThe eWAT ubiquitinome of wild type mice and Mdm2 adipocyte-specific knock-in mice fed high-fat diet
The epididymal adipose tissue (eWAT) samples from wild type mice fed high-fat diet for 12 weeks (H_WT_E) and Mdm2 adipocyte-specific knock-in mice fed high-fat diet for 12 weeks (H_KI_E) were mixed separately, and subjected to ubiquitinome study by Label-free quantification and ubiquitination modifi...
ORGANISM(S): Mus Musculus 
PXD034127 |
ProteomicsRNA-Pull down and MS for Snhg3
To screen Snhg3-binding proteins using-RNA Pull down and MS
ORGANISM(S): Mus Musculus 
2023-01-17 | PXD039526 |
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