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TranscriptomicsDistinct gene expression profiles associated with the susceptibility of pathogen-specific CD4 T cells to HIV-1 infection
Analysis of global gene expression profiles of flow cytometry-sorted, different pathogen-specific CD4+ T cell populations from the same peripheral blood mononuclear cells (PBMC), to identify molecular parameters that regulate differential susceptibilities of these CD4+ T cells to HIV infection. The ...
ORGANISM(S): Homo sapiens 
2012-12-13 | E-GEOD-42853 | biostudies-arrayexpress
TranscriptomicsNext Generation Sequencing Facilitates Small RNA Mediated Rice Resistance to Xoo
Purpose: The goal of this study is to identify small non-conding RNAs which are involved in rice resistance to Xoo. Methods: Rice leaves were inoculated with the Xoo strain PXO61 at the four-leaf to five-leaf stage by the leaf-clipping method. Control rice plants were inoculated with water (mock ino...
ORGANISM(S): Oryza sativa Japonica Group 
2016-02-25 | E-GEOD-69242 | biostudies-arrayexpress
GenomicsPoly(A) RNA sequencing of hepatocellular carcinoma tumors and their matched noncancerous liver tissues
Background & Aims: The differentiation of distinct multifocal hepatocellular carcinoma (HCC): multicentric disease vs. intrahepatic metastases, in which the management and prognosis varies substantively, remains problematic. We aim to stratify multifocal HCC and identify novel diagnostic and prognos...
EGAS00001002337 | EGA
Genomicswhole genome sequence data of multifocal hepatocellular carcinoma
Background & Aims: The differentiation of distinct multifocal hepatocellular carcinoma (HCC): multicentric disease vs. intrahepatic metastases, in which the management and prognosis varies substantively, remains problematic. We aim to stratify multifocal HCC and identify novel diagnostic and prognos...
EGAS00001002338 | EGA
ProteomicsProteome of root from Gossypium barbadense infected by Verticillium
In this study, two kinds of island cotton materials with different resistances of Verticillium dahliae were used for Verticillium dahliae infection, the proteomic was used to detect all the protein expression levels in the roots of the two kinds of cotton, and the spectronaut pulsar x software was s...
ORGANISM(S): Gossypium Barbadense 
PXD017527 |
TranscriptomicsDNA methylation profiling in the Carolina Breast Cancer Study
A microarray targeting promoters of cancer-related genes was used to evaluate DNA methylation at 935 CpG sites in 517 invasive breast tumors from the Carolina Breast Cancer Study (CBCS), a population-based study of invasive breast cancer. Concensus clustering using methylation (β) values for the 16...
ORGANISM(S): Homo sapiens 
2015-04-07 | E-GEOD-51557 | biostudies-arrayexpress
ProteomicsTargeting mitochondria-inflammation circuit by β-hydroxybutyrate mitigates heart failure with preserved ejection fraction
Rationale: Over 50% of heart failure patients have preserved, rather than reduced ejection fraction (HFpEF vs. HFrEF). Complexity of its pathophysiology and the lack of animal models hamper the development of effective therapy for HFpEF. Objective: This study was designed to investigate the metabol...
ORGANISM(S): Mus Musculus 
2021-10-22 | PXD021957 |
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