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ProteomicsIdentification of proteins specifically binding to ac4C RNA probes
As a newly identified mRNA modification, the regulation of ac4C remains largely unexplored. RNA-binding proteins (RBPs) that specifically binds to ac4C modification and mediate downstream cellular activities (readers) have not been reported yet. We synthesized acetylated and non-acetylated RNA probe...
ORGANISM(S): Homo sapiens (Human) 
2021-07-20 | PXD027014 | Pride
Rna pulldown Ac4c Acetylated rna probes 
ProteomicsProtein profiling reveals the characteristic changes of complement cascade pathway in the tissues of gastric signet ring cell carcinoma
Signet ring cell carcinoma (SRCC) is a histological subtype of gastric cancer with distinct features in multiple aspects compared to adenocarcinomas (ACs). Lacking of systematically molecular overview to this disease made a slow progress in its clinical practice. In the present proteomics study, gas...
ORGANISM(S): Homo sapiens (Human) 
2021-02-25 | PXD022952 | Pride
Signet ring cell Mass spectrometry Stomach neoplasms Proteomics Complement system proteins 
ProteomicsProtein profiling reveals the characteristic changes of complement cascade pathway in the tissues of gastric signet ring cell carcinoma
Signet ring cell carcinoma (SRCC) is a histological subtype of gastric cancer with distinct features in multiple aspects compared to adenocarcinomas (ACs). Lacking of systematically molecular overview to this disease made a slow progress in its clinical practice. In the present proteomics study, gas...
ORGANISM(S): Homo sapiens (Human) 
2021-02-25 | PXD022627 | Pride
Signet ring cell Mass spectrometry Stomach neoplasms Proteomics Complement system proteins 
ProteomicsProtein profiling reveals the characteristic changes of complement cascade pathway in the tissues of gastric signet ring cell carcinoma
Signet ring cell carcinoma (SRCC) is a histological subtype of gastric cancer with distinct features in multiple aspects compared to adenocarcinomas (ACs). Lacking of systematically molecular overview to this disease made a slow progress in its clinical practice. In the present proteomics study, gas...
ORGANISM(S): Homo sapiens (Human) 
2021-02-25 | PXD022405 | Pride
Signet ring cell Mass spectrometry Stomach neoplasms Proteomics Complement system proteins 
UnknownThe influence of glutathione metabolism on alkaline adaptation of Amur ide (Leuciscus waleckii) and potential role of gut microbiota
Not available
S-EPMC12344994 | biostudies-literature
GenomicsRole of Tet1 in genomic imprinting erasure [RRBS-sperm]
Genomic imprinting is an allele-specific gene expression system important for mammalian development and function. The molecular basis of genomic imprinting is allele-specific DNA methylation 2. While it is well known that the de novo DNA methyltransferases Dnmt3a/b are responsible for the establishm...
ORGANISM(S): Mus musculus 
2013-12-02 | E-GEOD-49763 | biostudies-arrayexpress
GenomicsRole of Tet1 in genomic imprinting erasure [RRBS-PGC]
Genomic imprinting is an allele-specific gene expression system important for mammalian development and function. The molecular basis of genomic imprinting is allele-specific DNA methylation 2. While it is well known that the de novo DNA methyltransferases Dnmt3a/b are responsible for the establishm...
ORGANISM(S): Mus musculus 
2013-12-02 | E-GEOD-49762 | biostudies-arrayexpress
TranscriptomicsUrban waterways microbial communities (GeoChip)
The increased urban pressures are often associated with specialization of microbial communities. Microbial communities being a critical player in the geochemical processes, makes it important to identify key environmental parameters that influence the community structure and its function.In this pro...
ORGANISM(S): environmental samples 
2014-12-22 | E-GEOD-64286 | biostudies-arrayexpress
ProteomicsProteome-wide identification of S-sulfenylated cysteines reveals metabolic adaptation to freezing stress after cold acclimation in Brassica napus
We performed an iodoTMT-based proteomic analysis to identify the redox sensitive proteins in vivo under freezing stress after cold acclimation in Brassica napus. Totally, we obtained 1,372 sulfenylated sites in 714 proteins. Here we will provide the MS data of iodoTMT labeled peptides under both c...
ORGANISM(S): Brassica Napus 
2022-06-16 | PXD034549 |
Proteomics[HPP-2.0] The Comparable Microenvironment Shared by Colorectal Adenoma and Carcinoma: An Evidence of Stromal Proteomics
we initiated a proteomic project to survey stromal proteins responsive to adenoma and carcinoma of colorectal tissues. Most tissues of adjacent, adenoma, and carcinoma were individually sampled from CRC patients using LCM, after which tissue samples were subjected to proteomic analysis using high-re...
ORGANISM(S): Homo Sapiens 
PXD046176 |
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