Lifestyle - OmicsDI

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Unknown (27138)
Genomics (1414)
Transcriptomics (447)
Proteomics (126)
Clinical (97)
Metabolomics (49)
Genomic (40)
Methylation profiling (39)
Other (12)
Models (5)

Organisms

Homo sapiens (220)
Mus musculus (142)
Rattus norvegicus (18)
Vibrio harveyi (16)
Arabidopsis thaliana (10)
Burkholderia cenocepacia (7)
Escherichia coli (7)
Triticum aestivum (5)
Pseudomonas aeruginosa (5)
Campylobacter jejuni (4)
Streptococcus pneumoniae D39 (4)
Arabidopsis lyrata subsp. lyrata (4)
Thermotoga maritima MSB8 (3)
Rhodopirellula baltica (3)
Rhizobium etli CFN 42 (3)
Toscana virus (3)
Enterococcus faecium (2)
Pseudomonas putida (2)
Solanum lycopersicum (2)
Steinernema carpocapsae (2)
Sinorhizobium meliloti 1021 (2)
Panagrellus redivivus (2)
Pseudomonas aeruginosa TBCF10839 (2)
Cereibacter sphaeroides (1)
gut metagenome (1)
Phaeobacter inhibens (1)
Waddlia chondrophila (1)
Brucella suis 1330 (1)
Fusarium oxysporum (1)
Alternaria brassicicola (1)

Organisms

Homo sapiens (184)
Mus musculus (112)
human gut metagenome (26)
marine metagenome (15)
Rattus norvegicus (10)
Lacticaseibacillus paracasei (9)
Paracoccus yeei (8)
Vibrio harveyi (8)
Acidithiobacillus thiooxidans (7)
Escherichia coli (5)
Scophthalmus maximus (4)
Orbilia oligospora (4)
Pseudomonas aeruginosa PAO1 (4)
human metagenome (4)
feces metagenome (4)
mouse gut metagenome (4)
Saccharomyces cerevisiae (4)
Serratia marcescens (3)
hot springs metagenome (3)
soil metagenome (3)
Serendipita indica (2)
Synchytrium endobioticum (2)
Collimonas pratensis (2)
Collimonas arenae (2)
Exaiptasia diaphana (2)
Lampetra richardsoni (2)
Rhizopus microsporus (2)
Bucorvus leadbeateri (2)
Parmales (2)
Methylophilaceae bacterium B1 (2)

Repository

ENA (1294)
geo (354)
biostudies-arrayexpress (183)
pride (103)
EGA (78)
MetaboLights (41)
dbGaP (40)
iProX (9)
MassIVE (8)
GNPS (7)
BioModels (5)
jPOST (5)
EVA (2)
GPMDB (1)
MetabolomicsWorkbench (1)
PanoramaPublic (1)

Tissue

Blood plasma (6)
Cell culture (5)
Feces (5)
Brain (4)
Blood serum (2)
Epithelial cell (2)
Plant cell (2)
Sperm (2)
Tooth enamel (2)
Whole body (2)
Muscle (1)
Liver (1)
Blood (1)
Adipose tissue (1)
Blood (1)
Bone (1)
Caput epididymis (1)
Cell suspension culture (1)
Dental plaque (1)
Epididymal white adipose tissue (1)
Exocrine glandular secretion (1)
Fungal cell (1)
Gastrocnemius (1)
Granulosa cell (1)
Hair (1)
Keratinocyte (1)
Leukocyte (1)
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Peritubular myoid cell (1)

Disease

Colorectal Neoplasms (41)
Colorectal cancer (6)
Carcinogenesis (2)
Breast Neoplasms (2)
Malignant neoplasm of colon (2)
Carcinoma (2)
Colorectal Cancer (2)
Colorectal cancer (2)
Rectal Neoplasms (2)
Neoplasms (2)
Stage II to III colorectal cancer survivors (2)
Obesity (2)
Cholesterol ester storage disease (1)
Metabolic syndrome (1)
Obese (1)
Ovarian cancer (1)
Lifestyle behaviours that influence risk of the five most common preventable cancers in the UK (lung (1)
Patients attending genetic screening for colorectal and/or breast cancer risk (1)
Infertility (1)
Thyroid cancer (1)
Colon and Rectum cancer (1)
Oesophageal cancer (1)
Low anterior resection syndrome (1)
Colorectal advanced neoplasia (1)
Antineoplastics (1)
Microbiome, MicroRNA, Colorectal cancer, Adenomas (1)
Fatigue (1)
Colorectal Neoplasms, Hereditary Nonpolyposis (1)
Breast cancer and colorectal cancer survivors (1)
Adenomatous Polyposis Coli (1)

Technology Type

Mass Spectrometry (104)
Shotgun proteomics (71)
Mass spectrometry (31)
Bottom-up proteomics (13)
SWATH MS (11)
Top-down proteomics (9)
Data-dependent acquisition (8)
Mass spectrometry assay (6)
Gel-based experiment (6)
NMR spectroscopy (4)
Data-independent acquisition (3)
Affinity purification coupled with mass spectrometry proteomics (2)
Illumina HumanWG-6 (1)
Illumina OncoArray (1)
Illumina HiSeq 2500, ILLUMINA (1)
Applied Biosystems 3100 automated sequencer-GeneMarker v.1.6 (Softgenetics) (1)
Illumina HumanOmni1-Quad-Illumina GenomeStudio (1)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina HumanHap 550K, Illumina HumanHap300-Duo (1)
Life Tech - Solid (1)
EI (1)
Affinity proteomics (1)
All-ion fragmentation (1)
HDMSE (1)

Instrument Platform

Q Exactive (9)
Liquid Chromatography MS - positive - reverse phase (9)
LTQ Orbitrap Classic (Thermo Scientific) (8)
Liquid Chromatography MS - negative - reverse phase (8)
Illumina NovaSeq 6000 (5)
Illumina HiSeq 2000 (5)
NextSeq 500 (3)
Q Exactive HF (3)
Liquid Chromatography MS - negative - hilic (3)
Illumina HiSeq 1500 (2)
Illumina HiSeq 2500 (2)
Gas Chromatography MS - (2)
Gas Chromatography MS - positive (2)
Direct infusion MS - positive (2)
Bruker (2)
Nuclear Magnetic Resonance (NMR) - (2)
Liquid Chromatography MS - alternating - reverse phase (2)
10X Chromium Controller (1)
AB SOLiD 3 Plus System (1)
GeneChip Scanner 3000 [Affymetrix] (1)
GenePix Personal 4100A [Axon Instruments] (1)
Variable Atmosphere Incubator (1)
Illumina MiSeq (1)
- (1)
6550 Quadrupole Time-of-Flight (1)
Instrument (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap XL (1)
MALDI Synapt G2-S HDMS (1)
Orbitrap Fusion (1)

Publication Date

2023 (66)
2025 (63)
2021 (59)
2026 (56)
2013 (55)
2024 (49)
2022 (39)
2014 (37)
2020 (36)
2012 (34)
2019 (31)
2016 (31)
2015 (29)
2011 (29)
2018 (24)
2017 (21)
2010 (18)
2009 (13)
2008 (9)
2007 (9)
2005 (3)
2006 (1)

UNIPROT ID/AC

Q8WTV0 (1)
P11597 (1)
Q05469 (1)
Q6PIU2 (1)
Q00341 (1)
P98155 (1)
P01130 (1)
P06858 (1)
P04180 (1)

CHEBI ID

CHEBI:28044 (19)
CHEBI:28300 (18)
CHEBI:16737 (18)
CHEBI:18186 (17)
CHEBI:24898 (17)
CHEBI:30769 (17)
CHEBI:26271 (16)
CHEBI:26986 (16)
CHEBI:16811 (16)
CHEBI:6650 (16)
CHEBI:27266 (16)
CHEBI:29016 (16)
CHEBI:16704 (16)
CHEBI:30915 (16)
CHEBI:27897 (16)
CHEBI:17822 (15)
CHEBI:18237 (15)
CHEBI:25017 (15)
CHEBI:15891 (15)
CHEBI:17368 (15)
CHEBI:22660 (14)
CHEBI:22653 (14)
CHEBI:27570 (14)
CHEBI:17234 (14)
CHEBI:17154 (14)
CHEBI:16113 (10)
CHEBI:61995 (1)
CHEBI:22868 (1)
CHEBI:17002 (1)
CHEBI:17984 (1)

Metabolite Name

Valine (8)
Citrulline (8)
Taurine (8)
Leucine (7)
Phenylalanine (7)
Tyrosine (7)
Threonine (7)
Isoleucine (7)
Glutamine (7)
Xanthine (7)
Creatinine (7)
Methionine sulfoxide (6)
Homoarginine (6)
Gamma-glutamylglutamate (6)
Deoxycarnitine (6)
4-guanidinobutanoate (6)
1-methylhistidine (6)
Serine (6)
Proline (6)
Lysine (6)
Methionine (6)
Glucose (6)
Creatinine (6)
Creatine (6)
Glutamine (6)
Alanine (6)
Isoleucine (6)
Adenosine (6)
Phenylalanine (6)
Uridine (6)

First Public Date

2024 (164)
2026 (151)
2025 (140)
2023 (112)
2021 (98)
2014 (97)
2022 (88)
2019 (83)
2013 (81)
2020 (68)
2018 (63)
2016 (52)
2017 (49)
2015 (44)
2011 (3)
2012 (1)

Modelling Approach

Constraint-based model (2)
Agent-based model (1)
Ordinary differential equation model (1)

Study status

Completed (38)
Recruiting (20)
Active, not recruiting (13)
Not yet recruiting (13)
Not provided (8)
Terminated (2)
Withdrawn (2)
Enrolling by invitation (1)

Lab affiliation

Associate Professor, Department of Biology, Massachusetts Institute of Technology and Whitehead Institute of Biomedical Research (5)
Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes (URMITE) UMR 6236, Faculté de médecine 27 Bd Jean Moulin 13385 MARSEILLE Cedex 05 FRANCE (4)
Wageningen University (3)
Department of Biochemistry, Charité Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, Berlin Institute of Health, Berlin, Germany Berlin Institute of Health (BIH) at Charité Universitätsmedizin Berlin, Berlin, Germany The Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Roosevelt Dr, Headington, Oxford OX3 7BN, UK (2)
Department of Food Science and Technology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia (2)
Department of Molecular Pathology, Faculty of Military Health Sciences, University of Defense, Hradec Kralove, Czech Republic (2)
Laboratory of Enzymology and Molecular Biology (LEBIMO), Institute of Biology, University of Campinas (UNICAMP) (2)
Quantitative proteomics University of Tuebingen Auf der Morgenstelle 15 72076 Tuebingen Germany (2)
Universität Greifswald Institut für Pharmazie, AG Pharmazeutische Biotechnologie Greifswald, Germany (2)
Associate Professor, Department of Biology, Massachusetts Institute of Technology and Whitehead Institute of Biomedical Research (lab head) (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS), Technical University of Munich (TUM), Freising, Germany (1)
Bioanalytical Mass Spectrometry Facility Mark Wainwright Analytical Centre University of NSW Australia (1)
Biological and Environmental Proteomics, Institute of Biomedical Research of Barcelona, Spanish National Research Council (IIBB-CSIC/IDIBAPS), Rosellón 161, E-08036 Barcelona, Spain. (1)
Bioorganic Analytics, Institute for Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Lessingstr. 8, 07743 Jena, Gemany (1)
CSIC - Consejo Superior de Investigaciones Cientificas (1)
Capital institute of Pediatrics. (1)
Centre for Advanced Imaging, The University of Queensland, St Lucia, QLD 4072, Australia. Centre for Biodiversity Dynamics, Department of Biology, NTNU, N-7491 Trondheim, Norway Centre for Ecological and Evolutionary Synthesis, Department of Biosciences, University of Oslo, 0316 Oslo, Norway (1)
Centre for Environmental Biotechnology, Bangor University, Deiniol Rd, Bangor, LL57 2UW, UK School of Natural Sciences, Bangor University, Deiniol Rd, Bangor, LL57 2UW, UK (1)
Chronic Disease Programme (UFIEC), Instituto de Salud Carlos III, Majadahonda, E-28220 Madrid, Spain (1)
Cleveland Clinic Lerner Research Institute (1)
Cleveland Clinic Lerner Research Institute Cardiovascular and Metabolic Sciences (1)
Cologne Excellence Cluster on Cellular Stress Responses in Ageing-Associated Diseases (CECAD), Center for Molecular Medicine Cologne (CMMC), and Institute for Mitochondrial Diseases and Ageing, Medical Faculty, University of Cologne D-50931 Cologne, Germany. (1)
Departamento de Genética Molecular, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Mexico City, Mexico. (1)
Department for Cell Biology BioMedizinisches Centrum - BMC LMU Muenchen, Med. Faculty Großhaderner Straße 9 82152 Planegg-Martinsried (1)
Department of Biochemistry, University of Missouri, Columbia, Missouri (1)
Department of Bioclinical Sciences College of Dentistry Kuwait University Kuwait. (1)
Department of Bioengineering, Technical University of Denmark, DK-2800 Kgs. Lyngby, Denmark (1)
Department of Biological Sciences, Ohio University (1)
Department of Biomedical Sciences, University of Sassari, Sassari, Italy (1)
Department of Infection Biology, Institute of Infection and Global Health, University of Liverpool. Liverpool, UK. (1)

Keyword

Lifestyle (8)
Diet (6)
Nutrition (3)
Lifestyle intervention (3)
Aspirin (3)
Exercise (3)
Fear of cancer recurrence (2)
Health (2)
Randomized controlled trial (2)
Cancer survivor (2)
Behavioral intervention (2)
Prevention (2)
Mortality (2)
Morbidity (2)
Home-based (2)
Rectal cancer (2)
Gonadotropins (1)
CLOMIPHENE (1)
Ovulation-Stimulating Drugs (1)
Behaviour (1)
Community Health Workers (1)
Sphincter sparing surgery (1)
Wexner score (1)
Garden (1)
Motivation (1)
Behavior (1)
Economic evaluation (1)
Self-management training (1)
Families (1)
First-degree relatives (1)

IsPrivate

False (5)

Model Flag

Non Kinetic (1)

Submitter Keywords

Manuscript Accepted (1)

Classification

bacteria (58)
fungi (13)
protozoa (3)
helminths (1)
viruses (1)

Study type

Transcription profiling by array (119)
Interventional (61)
Observational (34)
RNA-seq of coding RNA (32)
Methylation profiling by array (10)
Comparative genomic hybridization by array (5)
Unknown experiment type (2)
Transcription profiling by tiling array (2)
ChIP-seq (2)
MicroRNA profiling by array (2)
DNA-seq (2)
RNA-seq of non coding RNA (2)
ChIP-chip by tiling array (1)
Other (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)
Other (1)
Observational patient registry (1)

Release Date

2025 (3727)
2022 (3614)
2023 (3193)
2024 (2982)
2021 (2976)
2020 (2243)
2019 (1724)
2018 (1439)
2017 (1083)
2016 (884)
2015 (752)
2014 (585)
2026 (530)
2013 (441)
2012 (323)
2011 (252)
2010 (176)
2009 (143)
2008 (87)
2007 (49)
2006 (49)
2005 (31)
2004 (10)
2003 (8)
2001 (8)
2002 (6)
2000 (3)
1999 (2)
1998 (1)

Location

United States (24)
United Kingdom (15)
China (8)
Australia (7)
Netherlands (6)
France (6)
Spain (4)
Denmark (3)
Germany (3)
Italy (3)
Belgium (3)
Iran (2)
Latvia (2)
Slovenia (2)
Taiwan (2)
South Korea (2)
Luxembourg (1)
Cyprus (1)
Morocco (1)
Finland (1)
Norway (1)
Lithuania (1)
Malaysia (1)
India (1)
Puerto Rico (1)
Bulgaria (1)
Greece (1)
Turkey (1)
Brazil (1)
Canada (1)

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Bilophila wadsworthia inhibits lifestyle intervention response in Gestational Diabetes Mellitus via L-glutamine regulation

Fecal samples were collected from 26 pregnant women with gestational diabetes mellitus (GDM) prior to and following a lifestyle intervention study, and subsequently analyzed using untargeted metabolomics.

2026-04-16 | MTBLS13807 | MetaboLights

Multiomics and digital monitoring during lifestyle changes reveal independent dimensions of human biology and health

In order to explore opportunities for personalized and predictive health care, we collected serial clinical measurements, health surveys and multiomics profiles (genomics, proteomics, autoantibodies, metabolomics and gut microbiome) from 96 individuals. The participants underwent data-driven heal...

2021-09-02 | MTBLS2187 | MetaboLights

Untargeted metabolomics identifies a plasma sphingolipid-related signature associated with lifestyle intervention in prepubertal children with obesity

OBJECTIVE: Childhood obesity is a strong risk factor for adult obesity and metabolic diseases, including type 2 diabetes and cardiovascular disease. Early lifestyle intervention in children with obesity reduces future disease risk. The objective of this study is to identify metab...

2018-02-09 | MTBLS423 | MetaboLights

Systematic identification of bacterial factors driving Staphylococcus aureus intracellular lifestyle in non-professional phagocytes

Staphylococcus aureus is a major human pathogen responsible for severe infections. While traditionally described as extracellular, increasing evidence establishes S. aureus as a facultative intracellular pathogen. Intracellularity contributes to immune evasion, dissemination, and antibiotic failu...

2025-10-26 | MTBLS13220 | MetaboLights

Transcriptomic and proteomic insights into innate immunity and adaptations to a symbiotic lifestyle in the gutless marine worm Olavius algarvensis

ORGANISM(S): Olavius Algarvensis (ncbitaxon:188229)

2016-02-12 | MSV000079512 | MassIVE

Changes in Prostate Gene Expression in a Cohort Undergoing an Intensive Nutrition and Lifestyle Intervention

The GEMINAL Study- Gene Expression Modulation by Intervention with Nutrition and Lifestyle We conducted a pilot study to examine changes in gene expression in men diagnosed with low risk prostate cancer who participated in an intensive nutrition and lifestyle intervention. We profiled gene expressi...

ORGANISM(S): Homo sapiens

2010-05-26 | E-GEOD-10306 | biostudies-arrayexpress

Maternal obesity alters offspring liver and skeletal muscle metabolism in early post-puberty despite maintaining a normal post-weaning dietary lifestyle

Not available

ORGANISM(S): Papio hamadryas

ST002254 | MetabolomicsWorkbench

Human adipose tissue single-nucleus RNA-sequencing before and after lifestyle intervention

Single-nuclei RNA sequencing (snRNA-seq) data of human adipose tissue. The samples are a part of a study investigating the effect of Lifestyle intervention on human adipose tissue. The 10 participants represented in this study were severely obese at project start with a mean BMI of 46.0 ± 3.1 kg/m2 ...

ORGANISM(S): Homo sapiens

2026-02-11 | E-MTAB-16620 | biostudies-arrayexpress

Lifestyle Medicine Intensivist Competencies: 2023 Expert Consensus Update.

Not available

S-EPMC11339762 | biostudies-literature

Lifestyle Medicine Practitioners Implementing a Greater Proportion of Lifestyle Medicine Experience Less Burnout.

Not available

S-EPMC10631282 | biostudies-literature

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