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MetabolomicsMetabolomic Responses of Arabidopsis Suspension Cells to Bicarbonate under Light and Dark Conditions
Global CO2 level presently recorded at 400 ppm is expected to reach 550 ppm in 2050, an increment likely to impact plant growth and productivity. Using targeted LC-MS and GC-MS platforms we quantified 229 and 29 metabolites, respectively in a time-course study to reveal short-term responses to diffe...
2017-04-25 | MTBLS311 | MetaboLights
MetabolomicsA systems analysis with “simplified source-sink model” reveals metabolic reprogramming in a pair of source-to-sink organs during early fruit development in tomato by LED light treatments
Tomato (Solanum lycopersicum) is a model crop for studying development regulation and ripening in flesh fruits and vegetables. Supplementary light to maintain the optimal light environment can lead to the stable growth of tomatoes in greenhouses and areas without sufficient daily light integral. Tec...
2018-09-27 | MTBLS699 | MetaboLights
MetabolomicsInositol Pyrophosphates Mediate Chloroplast Lipid Remodeling and Nuclear Gene Repression during High-Light Acclimation in Chlamydomonas reinhardtii
Microalgae are photosynthetic organisms capable of autotrophic growth. Their applicability in multiple industrial fields has been largely studied, thanks to their ability to fixate CO2 into high added value organic products like fatty acids and carotenoids. However, our under-standing of the cellula...
2026-06-09 | MTBLS14720 | MetaboLights
MetabolomicsIntercropping with Peucedanum praeruptorum enhances the growth and quality of Pseudostellaria heterophylla

Pseudostellaria heterophylla, a valued shade-loving traditional Chinese medicinal herb, faces severe yield and quality decline under continuous monocropping, threatening industry sustainability. Intercropping, which leverages niche complementarity, offers an eco-friendly mitigation strategy, but ...

2026-05-06 | MTBLS14102 | MetaboLights
MetabolomicsEnhancing sensory quality of heat-not-burn tobacco via bioaugmentation with Cytobacillus oceanisediminis C4 and Amylase

Tobacco fermentation is a crucial process for improving tobacco quality by reducing undesirable substances. In this study, an enzyme–microbe combined fermentation strategy was established and evaluated. Cytobacillus oceanisediminis C4 combined with amylase pretreatment was applied in the fermenta...

2025-12-26 | MTBLS13570 | MetaboLights
TranscriptomicsGenome-wide characterization of light-inducible responses reveals a hierarchical light-sensing cascade in N. crassa
To better understand the roles of WC-1, WC-2 and other putative photoreceptors in mediation of light signals and to identify new components in light sensing cascades, we used microarrays with genome-wide coverage to characterize light-inducible transcriptional changes in Neurospora crassa. After uns...
ORGANISM(S): Neurospora crassa 
2009-03-08 | E-GEOD-8932 | biostudies-arrayexpress
TranscriptomicsSystem responses to equal doses of photosynthetically usable radiation of blue, green, and red light in the marine diatom Phaeodactylum tricornutum.
We have studied the transcriptional, metabolic and photo-physiological responses to light of different spectral quality in the marine diatom Phaeodactylum tricornutum through time-series studies of cultures exposed to equal doses of photosynthetically usable radiation of blue, green and red light. T...
ORGANISM(S): Phaeodactylum tricornutum 
2014-12-22 | E-GEOD-55959 | biostudies-arrayexpress
MetabolomicsDelineating molecular regulatory network of meat quality of longissimus dorsi indicated by transcriptomic, proteomic, and metabolomics analysis in rabbit (UPLC-MS/MS assays)

This study aims to investigate the potential regulatory network responsible for the meat quality using multi-omics to help developing better varieties. Slaughter performance and meat quality of Shuxing No.1 rabbit outperformed Yila rabbit. Differentially expressed genes (DEGs) and differentially ...

2024-01-18 | MTBLS8957 | MetaboLights
TranscriptomicsTranscription profiling time series of Synechocystis cells exposed to red and blue light
Synechocystis cells illuminated to either red or blue light
ORGANISM(S): Synechocystis sp. PCC 6803 
2008-09-26 | E-TABM-339 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis exposed to low red:far red light treatment at 16 and 22 degrees
The purpose of this experiment was to identify genes responding differently to a 24 h low red to far red ratio (R:FR) treatment in plants grown at 16 and 22 degrees Experiment Overall Design: Microarrays were used as a gene discovery tool to identify genes showing differential regulation by low R:FR...
ORGANISM(S): Arabidopsis thaliana 
2008-06-16 | E-GEOD-8745 | biostudies-arrayexpress
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