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MetabolomicsMulti-omics Mechanistic Analysis of Efficient Lignocellulose Degradation by Pholiota adiposa Strain YAHS

Abstract This study focused on elucidating the lignocellulose degradation mechanism of Pholiota adiposa strain YAHS, aiming to provide theoretical basis and microbial resources for straw biorefining. Using the aniline blue-guaiacol plate screening method, 11 fungal strains were isolated from the ...

2025-10-12 | MTBLS13121 | MetaboLights
MetabolomicsAdaptation of gut microbiome and host metabolic systems to lignocellulosic degradation in bamboo rats

Bamboo rats (Rhizomys pruinosus) are among the few mammals that lives on a bamboo-based diet which is mainly composed of lignocellulose. However, the mechanisms of adaptation of their gut microbiome and metabolic systems in the degradation of lignocellulose are largely unknown. Here, we ...

2022-04-22 | MTBLS4161 | MetaboLights
MetabolomicsUntapped enzymatic potential: dehalogenase- and peroxidase-driven PVC degradation by gene carriers in Tibetan plateau pikas

Wide contamination of MPs including polyvinyl chloride (PVC) has been reported in remote regions such as Qinghai-Tibet Plateau (QTP). Microbial degradation of plastics is frequently coupled with lignocellulose-degrading enzymatic machinery. Given its status as a widespread biological sampler in Q...

2026-02-20 | MTBLS13916 | MetaboLights
ProteomicsMicrobial consortia driving lignocellulose transformation in agricultural woodchip bioreactors
Freshwater ecosystems can be largely affected by neighboring agriculture fields where potential fertilizer nitrate run-off may leach into surrounding water bodies. To counteract this eutrophic driver, farmers often utilize denitrifying woodchip bioreactors (WBRs) in which a consortium of microorgani...
ORGANISM(S): Bacteria Archaea 
2024-10-21 | PXD050137 | Pride
Metaproteomics Lignocellulose Anaerobe 
TranscriptomicsTranscriptomic profile of lignocellulose degradation from Trametes versicolor on poplar wood
The Trametes versicolor genome is predicted to encode many enzymes that can effectively degrade lignin, making it a has potentially useful application intool for biopulping and biobleaching. Poplar is an important and widely cultivated species of tree species, which isand extensively applied used in...
ORGANISM(S): Trametes versicolor 
2016-08-06 | E-GEOD-81742 | biostudies-arrayexpress
GenomicsTranscriptomic profiling of Peniophora incarnata T-7 during lignocellulose degradation under different substrate conditions
Transcriptomic profiling of Peniophora incarnata T-7 during lignocellulose degradation under different substrate conditions
PRJNA1481314 | ENA
ProteomicsSecretomic analyses of Ruminiclostridium papyrosolvens reveal its enzymatic basis for lignocellulose degradation
Efficient biotechnological conversion of lignocellulosic biomass to valuable products, such as transportation biofuels, is ecologically attractive, yet requires substantially improved mechanistic understanding and optimization to become economically feasible. Cellulolytic clostridia, such as Ruminic...
ORGANISM(S): [Clostridium] papyrosolvens DSM 2782 
2019-11-11 | PXD013253 | Pride
Ms2 Proteomics Bacterial genetics Physiology and metabolic engineering 
TranscriptomicsTranscriptomic profiling of Peniophora incarnata T-7 during lignocellulose degradation under different substrate conditions
Peniophora incarnata T-7 is a white-rot fungus with a pronounced capacity for preferential lignin degradation. To investigate the molecular responses of this strain during lignocellulose degradation, P. incarnata T-7 was cultured on different lignocellulosic substrates, including poplar wood, Chines...
ORGANISM(S): Peniophora incarnata 
2026-07-07 | GSE336360 | GEO
UnknownIsopod holobionts as promising models for lignocellulose degradation.
Not available
S-EPMC7071664 | biostudies-literature
GenomicsTranscriptome analysis of the brown rot fungus Gloeophyllum trabeum during lignocellulose degradation
Transcriptome analysis of the brown rot fungus Gloeophyllum trabeum during lignocellulose degradation
PRJNA655214 | ENA
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