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Transcriptomicswt yeast expression changes in low phosphate conditions
expression changes of 75 uM phosphate vs. 10000 uM phosphate
ORGANISM(S): Saccharomyces cerevisiae 
2014-05-14 | E-MTAB-2217 | biostudies-arrayexpress
TranscriptomicsHeatshock-Coldshock
Heatshock (30 to 37 deg C) and Coldshock (37 to 30 deg C) experiment looking at 5, 15, 30, 45 and 60 mins after the temp change in each condition.
ORGANISM(S): Saccharomyces cerevisiae 
2014-05-14 | E-MTAB-2219 | biostudies-arrayexpress
Transcriptomicswt expression changes in deletion strain-conditioned media
To rule out expression changes caused by depletion from, or excretion into the media, wild-type yeast was transferred to filtered media in which slow-growing deletion strains were grown previously
ORGANISM(S): Saccharomyces cerevisiae 
2014-05-14 | E-MTAB-2218 | biostudies-arrayexpress
TranscriptomicsSlx5_Slx8_Genome_Stability
The Saccharomyces cerevisiae Slx5/8 complex is the founding member of a recently defined class of ubiquitin ligases (STUbLs) that target sumoylated substrates. Slx5/8 has been implicated in genome stability and transcription, but the precise contribution to these processes is not clear. To character...
ORGANISM(S): Saccharomyces cerevisiae 
2013-08-06 | E-GEOD-33929 | biostudies-arrayexpress
Transcriptomicsyeast wt pool - plate reader
Contains a collection of wildtype Saccharomyces cerevisiae strains for estimating the biological variation. Wildtypes are obtained from the yeast wildtypes – platereader, wt pool background set HybSet, by randomly taking 100 wt vs. refpool (pooled wts) and 100 refpool vs. wt hybridizations Two chann...
ORGANISM(S): Saccharomyces cerevisiae 
2012-11-14 | E-GEOD-42217 | biostudies-arrayexpress
Transcriptomicswt expression changes in deletion strain-conditioned media
Alteration of growth condition or disruption of gene function are commonly used strategies to study cellular systems. Although widely appreciated that such experiments may result in indirect effects, these frequently remain uncharacterized. Here, genome-wide expression reanalysis of functionally unr...
ORGANISM(S): Saccharomyces cerevisiae 
2014-05-14 | E-GEOD-54539 | biostudies-arrayexpress
Transcriptomicsyeast wt pool
Contains a collection of wildtype Saccharomyces cerevisiae strains for estimating the biological variation. Wildtypes are obtained from the yeast wildtypes - wt pool background set HybSet, by randomly taking 100 wt vs. refpool (pooled wts) and 100 refpool vs. wt hybridizations Two channel microarray...
ORGANISM(S): Saccharomyces cerevisiae 
2012-11-14 | E-GEOD-42215 | biostudies-arrayexpress
Transcriptomicsyeast wt-matA pool
Contains a collection of wildtype matA Saccharomyces cerevisiae strains for estimating the biological variation. Two channel microarrays were used. RNA isolated from a large amount of wt yeast from a single culture was used as a common reference. Two independent cultures were hybridized on two separ...
ORGANISM(S): Saccharomyces cerevisiae 
2012-11-14 | E-GEOD-42240 | biostudies-arrayexpress
Transcriptomicsyeast wt-matA pool - plate reader
Contains a collection of wildtype matA Saccharomyces cerevisiae strains grown using a Tecan platereader for estimating the biological variation. Two channel microarrays were used. RNA isolated from a large amount of wt yeast from a single culture was used as a common reference. Two independent cultu...
ORGANISM(S): Saccharomyces cerevisiae 
2012-11-14 | E-GEOD-42241 | biostudies-arrayexpress
Transcriptomicswt yeast expression changes in low phosphate conditions
Alteration of growth condition or disruption of gene function are commonly used strategies to study cellular systems. Although widely appreciated that such experiments may result in indirect effects, these frequently remain uncharacterized. Here, genome-wide expression reanalysis of functionally unr...
ORGANISM(S): Saccharomyces cerevisiae 
2014-05-14 | E-GEOD-54527 | biostudies-arrayexpress
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