Liu G L GL - OmicsDI

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Unknown (392)
Transcriptomics (30)
Proteomics (16)
Genomics (14)
Metabolomics (10)

Organisms

Homo sapiens (24)
Mus musculus (14)
Arabidopsis thaliana (7)
Danio rerio (2)
Escherichia coli (2)
Ichthyophthirius multifiliis (1)
Chlorocebus sabaeus (1)
Rattus norvegicus (1)
Drosophila melanogaster (1)
Human alphaherpesvirus 3 (1)
Influenza A virus (A/New Caledonia/20/1999(H1N1)) (1)
Influenza A virus (A/Panama/2007/1999(H3N2)) (1)
Influenza A virus (A/Philippines/2/1982(H3N2)) (1)
Influenza A virus (A/Shandong/9/1993(H3N2)) (1)
Jatropha curcas (1)
Macaca mulatta (1)
Rhodotorula glutinis (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Xiphophorus malinche x Xiphophorus birchmanni (1)

Repository

biostudies-arrayexpress (34)
pride (15)
EGA (10)
MetaboLights (10)
MassIVE (1)

Tissue

Cell culture (3)
Epithelial cell (2)
Whole body (2)
Blood cell (1)
Brain (1)
Egg (1)
Leaf (1)
Permanent cell line cell (1)
Plant cell (1)
Stromal cell (1)
Testis (1)
Urine (1)

Disease

Acute leukemia (1)
Cervix carcinoma (1)
Kidney disease (1)
Malignant neoplasm of ovary (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (15)
Mass spectrometry (9)
Shotgun proteomics (7)
Bottom-up proteomics (4)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
Gel-based experiment (2)
NMR spectroscopy (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Glycoproteomics (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (2)
Axon- GenePix4000B (1)
Orbitrap Fusion Lumos (1)
Bruker (1)
Gas Chromatography MS - (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography Tandem MS (LC-MS/MS (Negative)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS (Positive)) (1)
MS Imaging - (1)
Orbitrap Elite (Thermo Scientific) (1)

Publication Date

2012 (7)
2010 (6)
2013 (5)
2015 (4)
2005 (4)
2024 (4)
2023 (4)
2014 (3)
2022 (3)
2019 (3)
2026 (3)
2018 (2)
2016 (2)
2011 (2)
2021 (2)
2017 (2)
2008 (1)
2006 (1)
2025 (1)
2020 (1)

CHEBI ID

CHEBI:15428 (3)
CHEBI:15603 (3)
CHEBI:16919 (3)
CHEBI:17568 (3)
CHEBI:18257 (3)
CHEBI:30769 (3)
CHEBI:14314 (2)
CHEBI:15354 (2)
CHEBI:15741 (2)
CHEBI:16000 (2)
CHEBI:16113 (2)
CHEBI:16199 (2)
CHEBI:16335 (2)
CHEBI:16414 (2)
CHEBI:16450 (2)
CHEBI:16543 (2)
CHEBI:16643 (2)
CHEBI:16704 (2)
CHEBI:16737 (2)
CHEBI:16742 (2)
CHEBI:16811 (2)
CHEBI:16828 (2)
CHEBI:16865 (2)
CHEBI:16977 (2)
CHEBI:17053 (2)
CHEBI:17154 (2)
CHEBI:17191 (2)
CHEBI:17203 (2)
CHEBI:17268 (2)
CHEBI:17295 (2)

Metabolite Name

Uric acid (3)
Choline (2)
Creatine (2)
Glycine (2)
L-methionine (2)
Linoleic acid (2)
Pseudouridine (2)
Urea (2)
(-)-Aristolene (1)
(-)-Aristolene isomer (1)
(-)-Globulol (1)
(-)-cis-sabinol (1)
(R)-3-hydroxybutyrate (1)
(S)-lactic acid (1)
1(10)-Aristolene (1)
1,2,3,4-Tetramethoxybenzene (1)
1,2,4-Trimethoxybenzene (1)
1,2,4-Trimethoxybenzene isomer (1)
1,2-Dimethoxy-4-(1,2-dimethoxyethyl)-benzene (1)
1,3-diphopshateglycerate (1)
1,5-Anhydro-D-sorbitol (1)
1-(3,4-Methylenedioxyphenyl)-propane-1-ol (1)
1-Hydroxy-2-(prop-2-enyl)-4,5-methylenedioxybenzene (1)
1-Hydroxy-2-(prop-2-enyl)-4,5-methylenedioxybenzene isomer (1)
1-Methyl-Histidine (1)
1-Methyladenosine (1)
1-Methylhistidine (1)
1-Pentadecene (1)
1-methylnicotinamide (1)
1-palmitoyl-2-(9,10-epoxystearoyl)phosphatidylcholine (1)

Study type

Transcription profiling by array (19)
RNA-seq of coding RNA (6)
ChIP-seq (3)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
Comparative genomic hybridization by array (1)
Other (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2021 (51)
2020 (45)
2023 (44)
2022 (44)
2024 (37)
2015 (29)
2025 (29)
2016 (21)
2018 (20)
2017 (16)
2014 (15)
2013 (14)
2012 (13)
2019 (11)
2010 (10)
2011 (6)
2008 (6)
2026 (6)
2005 (4)
2009 (3)
2006 (2)

Lab affiliation

Professor Emeritus Department of Chemistry The University of Texas at San Antonio Effective July 1, 2026: Johnson Foundation Professor of Chemical Enzymology Department of Biochemistry and Biophysics, Perelman School of Medicine Department of Chemistry, School of Arts and Sciences University of Pennsylvania, Philadelphia, PA 19104 (2)
Beijing Key Lab of Bioprocess, National Energy R&D Center for Biorefinery, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, PR China (1)
CRG/UPF Proteomics Unit, Center for Genomics Regulation, Universitat Pompeu Fabra, 08003 Barcelona, Spain. (1)
Department of Biology, Stanford University, USA (1)
Department of Cell and Molecular Biology, College of Medicine, Chang Gung University, Taoyuan, Taiwan (1)
Department of Medicine, Division of Nephrology, Icahn School of Medicine at Mount Sinai, New York, NY, USA. (1)
Epigenetics Program, Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania (1)
Key Laboratory of Brain Functional Genomics of Ministry of Education, Shanghai Key Laboratory of Brain Functional Genomics, and Shanghai Key Laboratory of Regulatory Biology, School of Life Sciences, East China Normal University, Shanghai, 100021, China (1)
Key laboratory of Research and Development for Resource Plant, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China (1)
National Institute of Standards and Technology (1)
Sir Peter MacCallum Department of Oncology, Peter MacCallum Cancer Centre, The University of Melbourne, Victoria 3000, Australia (1)
State Key Laboratory of Genetic Engineering, Department of Biochemistry, School of Life Sciences, Fudan University, Shanghai 200438, China (1)
State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, Nanjing, Jiangsu 210029, China. (1)
Taussig Cancer Institute of Cleveland Clinic Foundation (1)

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Comprehensive analysis of metabolome and transcriptome reveals the mechanism of color formation in different leave of Loropetalum chinense var. rubrum

BACKGROUND: Loropetalum chinense var. rubrum (L. chinense var. rubrum) is a precious, native, coloured-leaf ornamental plant in the Hunan Province. We found a L. chinense var. rubrum tree with 3 different leaf colours: GL (gre...

2023-01-30 | MTBLS5662 | MetaboLights

High resolution mapping of DNA replication origins in human genome

Because of the lack of information, regulation of DNA replication initiation in mammals is still poorly understood. In order to identify general rules, we have mapped replication origins along 1% of the human genome in HeLa cells. We found large gene-poor regions lacking origin and G+C rich regions ...

ORGANISM(S): Homo sapiens

2010-05-18 | E-GEOD-10217 | biostudies-arrayexpress

Identification of Superior Haplotypes and Haplotype Combinations for Grain Size- and Weight-Related Genes for Breeding Applications in Rice (Oryza sativa L.).

Not available

S-EPMC10742856 | biostudies-literature

GlSlt2 positively regulates GlMyb-mediated cellulose utilization in Ganoderma lucidum.

Not available

S-EPMC12506057 | biostudies-literature

Two-way crosstalk between BER and c-NHEJ repair pathway is mediated by Pol-β and Ku70.

Not available

S-EPMC6902736 | biostudies-literature

Untargeted gas chromatography–mass spectrometry-based metabolomics analysis of kidney and liver tissue from the Lewis Polycystic Kidney rat

Polycystic kidney disease (PKD) encompasses a spectrum of inherited disorders that lead to end-stage renal disease (ESRD). There is no cure for PKD and current treatment options are limited to renal replacement therapy and transplantation. A better understanding of the pathobiology of PKD is needed ...

2023-01-26 | MTBLS748 | MetaboLights

Comparative Proteomic and Physiological Analysis Reveals the Variation Mechanisms of Leaf Coloration and Carbon Fixation in a Xantha Mutant of Ginkgo biloba L.

Not available

S-EPMC5133795 | biostudies-literature

The Joubert syndrome protein ARL13B binds tubulin to maintain uniform distribution of proteins along the ciliary membrane.

Not available

S-EPMC5992585 | biostudies-literature

The Relative Content and Distribution of Absorbed Volatile Organic Compounds in Rats Administered Asari Radix et Rhizoma Are Different between Powder- and Decoction-Treated Groups

Asari Radix et Rhizoma (ARR) is an important traditional Chinese medicine. Volatile organic compounds (VOCs) are the main active constituents of ARR. Research on the metabolite profile of VOCs and the difference of absorbed constituents in vivo after an administration of ARR decoction and powder wil...

2021-02-01 | MTBLS2053 | MetaboLights

HPLC-MS/MS analysis of the S-monooxygenated S-Trp (O=S-Trp) bearing peptide in EcKatG S-Trp105

A sulfur-containing analog of tryptophan, thiotryptophan (3-benzothienyl-L-alanine, S-Trp), was genetically incorporated into EcKatG to replace the MYW-forming tryptophan, W105. The S-Trp-bearing peptide was isolated using trypsin digestion followed by HPLC separation. Tandem mass spectrometry (MS/M...

ORGANISM(S): Escherichia coli

2026-05-13 | PXD078006 | Pride

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