Liu Jian J - OmicsDI

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Unknown (584)
Proteomics (123)
Transcriptomics (26)
Metabolomics (17)
Genomics (15)
Models (2)

Organisms

Homo sapiens (68)
Chlamydomonas reinhardtii (31)
Enterococcus mundtii CRL35 (31)
Oncorhynchus tshawytscha (31)
Pseudomonas canadensis (31)
Human alphaherpesvirus 1 strain 17 (31)
Marchantia polymorpha subsp. ruderalis (31)
Methylocystis sp. (31)
Exiguobacterium sp. SH31 (31)
Amaranthus tricolor (31)
Mus musculus (20)
Drosophila melanogaster (8)
Rattus norvegicus (8)
Arabidopsis thaliana (6)
Zea mays subsp. mays (2)
Brassica rapa (2)
Oryza sativa Japonica Group (2)
Gallus gallus (2)
Vitis amurensis (1)
Gossypium hirsutum (1)
Sedum alfredii (1)
Oryza sativa Indica Group (1)
Zea mays (1)
Oryza sativa (1)
Middle East respiratory syndrome-related coronavirus (1)
Fragaria vesca (1)
Acinetobacter baumannii A424 (1)
Pyricularia oryzae 70-15 (1)
Aphis craccivora (1)
Rattus rattus (1)

Repository

iProX (86)
biostudies-arrayexpress (33)
pride (31)
MetaboLights (17)
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Disease

Malaria (2)
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Mixed disorder as reaction to stress (1)
Type 2 diabetes mellitus (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (31)
Mass spectrometry (16)
Shotgun proteomics (15)
Data-dependent acquisition (5)
Top-down proteomics (4)
SWATH MS (3)
Affinity purification coupled with mass spectrometry proteomics (3)
Olink affinity proteomics (2)
Affinity proteomics (2)
Bottom-up proteomics (2)
Illumina Genome Analyzer IIx, Illumina HiSeq 2000 (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Gel-based experiment (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (6)
Liquid Chromatography MS - positive - reverse phase (6)
Q Exactive (2)
GenePix 4000B [Axon Instruments] (1)
Thermo Scientific TSQ Fortis (1)
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Q Exactive HF (1)
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Agilent 7890 (1)
Liquid Chromatography MS - alternating - HILIC (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
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Gas Chromatography MS - positive (1)
Liquid Chromatography MS - positive (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - (1)
Exactive (Thermo Scientific) (1)
Xevo G2 QTOF (Waters) (1)

Publication Date

2022 (25)
2021 (15)
2024 (14)
2015 (11)
2025 (10)
2013 (8)
2020 (8)
2026 (7)
2023 (6)
2017 (6)
2019 (5)
2012 (4)
2007 (4)
2018 (4)
2016 (3)
2011 (3)
2010 (3)
2014 (1)

CHEBI ID

CHEBI:30769 (8)
CHEBI:15843 (7)
CHEBI:16704 (7)
CHEBI:24266 (6)
CHEBI:18012 (6)
CHEBI:16335 (6)
CHEBI:17568 (6)
CHEBI:15891 (6)
CHEBI:17596 (6)
CHEBI:27266 (5)
CHEBI:16449 (5)
CHEBI:30915 (5)
CHEBI:36005 (5)
CHEBI:48131 (5)
CHEBI:30763 (5)
CHEBI:17521 (5)
CHEBI:17154 (5)
CHEBI:16027 (5)
CHEBI:16708 (5)
CHEBI:18183 (5)
CHEBI:15741 (5)
CHEBI:17053 (5)
CHEBI:15428 (5)
CHEBI:16919 (5)
CHEBI:27897 (5)
CHEBI:17895 (5)
CHEBI:17351 (5)
CHEBI:15756 (5)
CHEBI:28716 (5)
CHEBI:16547 (4)

Metabolite Name

Arachidonic acid (5)
Inosine (5)
Naringenin (4)
Uracil (4)
Taurine (4)
Docosahexaenoic acid (4)
Adenosine (4)
Adenine (4)
Uridine (4)
4-indolecarbaldehyde (3)
6-hydroxymelatonin (3)
Leucine (3)
Valine (3)
Trans-aconitic acid (3)
Genistein (3)
Syringic acid (3)
Hesperetin (3)
Glycine (3)
Leucylproline (3)
Dehydrocholic acid (3)
Isoleucine (3)
Creatine (3)
4-hydroxybenzaldehyde (3)
Jasmonic acid (3)
Phloretin (3)
Rutin (3)
Isorhamnetin (3)
Ferulic acid (3)
Azelaic acid (3)
Fumaric acid (3)

IsPrivate

False (2)

Model Flag

Non Kinetic (2)

Modelling Approach

Constraint-based model (2)

Modification

Not available (1)

Study type

Transcription profiling by array (10)
RNA-seq of coding RNA (10)
ChIP-seq (4)
RNA-seq of non coding RNA (4)
Methylation profiling by high throughput sequencing (2)
RNAi profiling by array (1)
Genotyping by array (1)

Release Date

2025 (103)
2024 (79)
2023 (78)
2022 (78)
2021 (46)
2020 (45)
2019 (31)
2018 (24)
2015 (22)
2016 (21)
2017 (18)
2026 (16)
2013 (14)
2014 (13)
2012 (12)
2011 (5)
2010 (4)
2007 (4)
2009 (2)
2006 (1)

Lab affiliation

School of Life Sciences, Xiamen University (2)
Department of Pathophysiology, Key Laboratory of Ministry of Education for Neurological Disorders, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology (2)
The First Affiliated Hospital of Fujian Medical University (2)
Department of Radiation Oncology, Nanfang Hospital, Southern Medical University (1)
Department of Clinical Chemistry and Transfusion Medicine at Institute of Biomedicine, SU Sahlgrenska 413 45 Gothenburg, Sweden (1)
Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen, Denmark. (1)
Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, China (1)
State Key Laboratory of Green Pesticide, College of Chemistry, Central China Normal University, Wuhan 430079, China (1)
Department of Laboratory Medicine, Sahlgrenska academy, University of Gothenburg, Gothenburg, Sweden (1)
Institute of Plant Virology, Ningbo University, Ningbo, (1)
Department of Cardiology, Shanghai East Hospital, Tongji University School of Medicine, No. 150 Jimo Road, Shanghai 200120, China. (1)
Shenzhen Center for Disease Control and Prevention (1)
Shanghai Center for Plant Stress Biology (1)
Département de Biologie Cellulaire Université de Genève Sciences III 30, quai Ernest-Ansermet CH - 1211 Genève 4, Switzerland (1)
Shanghai Center for Plant Stress Biology, Chinese Academy of Sciences, Shanghai,201602, China (1)
State Key Laboratory of Rice Biology, the Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Institute of Biotechnology, Zhejiang University, Hangzhou, China (1)
Department of Pathophysiology, School of Basic Medicine, Key Laboratory of Ministry of Education of China for Neurological Disorders, Tongji Medical College, Huazhong University of Science and Technology (1)
Department of Laboratory Medicine, Institute of Biomedicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden. (1)
Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China (1)
Institute of Hydrobiology, Chinese Academy of Sciences (1)
School of Food and Biological Engineering, Hefei University of Technology (1)
Department of Pharmacy, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology (1)
Beijing Key Laboratory of DNA Damage Response and College of Life Science, Capital Normal University, Beijing 100048, China (1)
Institute of Neuroscience and the Collaborative Innovation Center for Brain Science, Chongqing Medical University, Chongqing, China (1)
Department of Clinical Chemistry and Transfusion Medicine, Institute of Biomedicine, University of Gothenburg, Gothenburg, Sweden (1)
Northwest University (1)
China Agricultural University (West Campus) College of Animal Science and Technology (1)
Cornell University (1)

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Threonine affects intestinal function, protein synthesis and gene expression of TOR in Jian carp (Cyprinus carpio var. Jian).

Not available

S-EPMC3724917 | biostudies-literature

Growth rate, body composition, digestive enzymes and transaminase activities, and plasma ammonia concentration of different weight Jian carp (Cyprinus carpio var. Jian).

Not available

S-EPMC5940995 | biostudies-literature

Comparing the efficacy and safety of atomization of traditional Chinese medicine Kai Hou Jian and budesonide suspension in adult acute laryngitis: a randomized control trial

Not available

S-EPMC9577730 | biostudies-literature

Effect of dietary L-glutamate levels on growth, digestive and absorptive capability, and intestinal physical barrier function in Jian carp (Cyprinus carpio var. Jian).

Not available

S-EPMC7283372 | biostudies-literature

Genetically predicted childhood body mass index and lung cancer susceptibility: A two-sample Mendelian randomization study.

Not available

S-EPMC10523972 | biostudies-literature

Validation of the Anticolitis Efficacy of the Jian-Wei-Yu-Yang Formula.

Not available

S-EPMC9451982 | biostudies-literature

Jian-Pi-Yi-Shen Decoction Relieves Renal Anemia in 5/6 Nephrectomized Rats: Production of Erythropoietin via Hypoxia Inducible Factor Signaling.

Not available

S-EPMC6420977 | biostudies-literature

Liu2012 - Genome-scale metabolic network of Scheffersomyces stipitis (iTL885)

Liu2012 - Genome-scale metabolic network of Scheffersomyces stipitis (iTL885) This model is described in the article: A constraint-based model of Scheffersomyces stipitis for improved ethanol production. Liu T, Zou W, Liu L, Chen J. Biotechnol Biofuels 2012; 5(1): 72 Abstrac...

2015-07-30 | MODEL1507180026 | BioModels

Involvement of Circulating Exosomal MicroRNAs in Jian-Pi-Yi-Shen Formula Protection Against Adenine-Induced Chronic Kidney Disease.

Not available

S-EPMC7884821 | biostudies-literature

Potential Therapeutic Effects of Mi-Jian-Chang-Pu Decoction on Neurochemical and Metabolic Changes of Cerebral Ischemia-Reperfusion Injury in Rats.

Not available

S-EPMC9107056 | biostudies-literature