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MetabolomicsLipidomic profiling reveals distinct differences in plasma lipid composition in healthy, prediabetic and type 2 diabetic individuals

The relationship between dyslipidemia and type 2 diabetes mellitus (T2D) has been extensively reported, but the global lipid profiles, especially in the East Asia population, associated with the development of T2D remain to be characterized. Liquid chromatography coupled to tandem mass spectromet...

2017-04-26 | MTBLS352 | MetaboLights
ProteomicsInduced Resistance Mechanism in Rice against the Rice Seedling Blight Disease by Fluoro-substituted Benzothiadiazole Derivatives and Chitosan oligosaccharide
Seedlings blight is one of the destructive diseases of rice, caused by the fungus Fusarium oxysporum, which impairs rice productions. Fluoro-substituted benzothiadiazole derivatives (FBT) and chitosan oligosaccharide (COS) are elicitors that can enhance plant resistance to pathogen infection. Howeve...
ORGANISM(S): Oryza Sativa 
PXD014979 |
Proteomicstreatment-naïve type 2 diabetics metaproteomics
To gain further insights into functional changes in the gut microbiome associated with T2D, we conducted metaproteomic analyses using iTRAQ (isobaric peptide tags for relative and absolute quantification) and LC-MS/MS-based protocols on 84 samples
ORGANISM(S): Homo sapiens (Human) 
2019-09-11 | PXD013452 | Pride
T2d Itraq Lc-ms/ms 
ProteomicsYbfA regulates the sensitivity of Escherichia coli K12 to plantaricin BM-1 via the BasS/BasR two-component regulatory system
YbfA regulates the sensitivity of Escherichia coli K12 to plantaricin BM-1 via the BasS/BasR two-component regulatory system
ORGANISM(S): Escherichia Coli 
2021-01-31 | PXD023898 |
ProteomicsProteomics of E. coli JW5917 and E. coli K12（2）
Escherichia coli K12 was used as a control for proteomic analysis of the rcs mutant Escherichia coli JW5917. Proteomics analysis was not limited to differential protein analysis, differential protein distribution, GO analysis annotation, KEGG enrichment, etc.
ORGANISM(S): Escherichia Coli 
2022-10-13 | PXD037354 |
ProteomicsBasS/BasR two-component system affects the sensitivity of Escherichia coli to class IIa bacteriocins by regulating the tricarboxylic acid cycle
The BasS / BasR two-component system in E. coli affects the sensitivity of E. coli to class IIa bacteriocins by regulating tricarboxylic acid cycle related proteins
ORGANISM(S): Escherichia Coli 
2022-01-06 | PXD030761 |
ProteomicsIntegrative Comparative Proteomics Identifies Core Differentially Expressed Proteins and Pathways for Drought Tolerance by Exploiting Contrasting Rice Varieties
More tightly coordinated response was revealed at the protein level in the tolerant varieties by proteomic analysis. Carbohydrate metabolism, redox homeostasis and protein transport were found activated in the tolerant varieties in functional enrichment analysis; while photosynthesis was suppressed....
ORGANISM(S): Oryza Sativa 
2026-01-11 | PXD072923 |
Genomicsena-DATASET-DTU-19-07-2017-19:09:46:884-206 - samples
The MHC vcf call set was generated using a modified AsmVar and BayesTyper pipeline. In contrast to the original pipeline, where variant calling is performed using alignment of collapsed assemblies to a reference genome, the MHC call set was produced using alignment of phased MHC haplotypes. Two iter...
EGAD00001003455 | EGA
Genomicsena-DATASET-DTU-20-02-2017-20:47:48:841-649 - samples
Variants on the Y chromosome for 62 danish males in VCF format from the GenomeDenmark Phase 2 cohort. Variants were called using reference based approaches such as the haplotype-caller module from GATK and using alignment of denovo assemblies to the reference using ASMvar.
EGAD00001003186 | EGA
Genomicsena-DATASET-DTU-01-02-2017-10:47:25:397-764 - samples
Alignment of Genome Denmark Phase II dataset to GRCh38. The dataset consists of 150 Danish individuals (50 trios) sequenced to 80X. The BAM-file contains data from multiple libraries created from one individual with libraries of 180, 500, 800, 2000, 5000, 10000 and 20000 bp. The libraries were creat...
EGAD00001003157 | EGA
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