Liu Shenzhen S - OmicsDI

OmicsDI

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Unknown (5602)
Proteomics (82)
Metabolomics (14)
Transcriptomics (13)
Genomics (2)

Organisms

Mycobacterium tuberculosis SP7 (56)
Mycobacterium tuberculosis SP10 (56)
Mycobacterium tuberculosis SP13 (56)
Mycobacterium tuberculosis SP22 (56)
Chlamydomonas reinhardtii (56)
Enterococcus mundtii CRL35 (56)
Oncorhynchus tshawytscha (56)
Pseudomonas canadensis (56)
Human alphaherpesvirus 1 strain 17 (56)
Mycobacterium tuberculosis SP1 (56)
Marchantia polymorpha subsp. ruderalis (56)
Methylocystis sp. (56)
Exiguobacterium sp. SH31 (56)
Palaemonetes sp. common grass shrimp associated circular virus (56)
Homo sapiens (10)
Mus musculus (8)
Arabidopsis thaliana (3)
Staphylococcus aureus (3)
Bemisia tabaci (2)
Vicia sativa (1)
Macaca mulatta (1)
Zea mays (1)
Oryza sativa (1)
Nicotiana tabacum (1)
Sus scrofa (1)
Klebsiella pneumoniae 1191100241 (1)
Canis lupus familiaris (1)
Rattus norvegicus (1)
Saccharomyces cerevisiae (1)
Candida albicans (1)

Repository

pride (56)
iProX (21)
biostudies-arrayexpress (15)
MetaboLights (14)
MassIVE (5)

Tissue

Cell culture (11)
Blood plasma (6)
Epithelial cell (4)
Blood serum (3)
Gastric epithelium (2)
Peripheral blood mononuclear cell (2)
HeLa cell (2)
Skin (2)
Testis (2)
Placenta (2)
Kidney (2)
Liver (2)
Gastric cancer cell line (1)
Esophageal epithelium (1)
Endosperm (1)
Meiotic cell (1)
Callus (1)
Plasma cell (1)
Semen (1)
Egg (1)
Pollen (1)
Photosynthetic cell (1)
Seedling (1)
Flower (1)
Seed (1)
Blood (1)
Permanent cell line cell (1)
Oocyte (1)
Urine (1)
Cell suspension culture (1)

Disease

Gastric signet ring cell adenocarcinoma (1)
Alzheimer's disease 18 (1)
Non-alcoholic steatohepatitis (1)
Esophagus squamous cell carcinoma (1)
Primary ovarian insufficiency (1)
Gastric adenocarcinoma (1)
Cervix carcinoma (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (56)
Shotgun proteomics (37)
Mass spectrometry (11)
Data-dependent acquisition (9)
Bottom-up proteomics (5)
SWATH MS (4)
Mass spectrometry assay (2)
Affinity proteomics (2)
Gel-based experiment (2)
Top-down proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-independent acquisition (2)
NMR spectroscopy (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (8)
Liquid Chromatography MS - positive - reverse phase (8)
Orbitrap Fusion Lumos (3)
BGISEQ-500 (1)
LTQ Orbitrap (1)
Q Exactive HF (1)
Liquid Chromatography MS – negative - reverse phase (1)
Liquid Chromatography MS - alternating - direct infusion (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2022 (22)
2023 (14)
2020 (12)
2025 (10)
2024 (10)
2021 (8)
2013 (7)
2018 (4)
2026 (4)
2015 (3)
2011 (3)
2019 (3)
2014 (2)
2017 (2)
2009 (1)

CHEBI ID

CHEBI:15940 (6)
CHEBI:16704 (6)
CHEBI:15741 (6)
CHEBI:30772 (5)
CHEBI:17418 (5)
CHEBI:17568 (5)
CHEBI:17895 (5)
CHEBI:17368 (5)
CHEBI:17203 (5)
CHEBI:32805 (4)
CHEBI:30768 (4)
CHEBI:15971 (4)
CHEBI:17509 (4)
CHEBI:9410 (4)
CHEBI:16828 (4)
CHEBI:30746 (4)
CHEBI:16977 (4)
CHEBI:16566 (4)
CHEBI:16335 (4)
CHEBI:16750 (4)
CHEBI:16708 (4)
CHEBI:16235 (4)
CHEBI:15843 (4)
CHEBI:16414 (4)
CHEBI:16737 (4)
CHEBI:15354 (4)
CHEBI:18019 (4)
CHEBI:16919 (4)
CHEBI:17154 (4)
CHEBI:32816 (4)

Metabolite Name

Uracil (6)
Hypoxanthine (6)
L-Tryptophan (6)
Adenine (6)
Uridine (6)
Guanine (6)
L-Proline (6)
Nicotinic acid (5)
L-Tyrosine (5)
L-Methionine (5)
Sphinganine (5)
Adenosine (5)
Guanosine (5)
Arachidonic acid (5)
L-Valine (5)
L-Lysine (5)
Cytidine (5)
Palmitic acid (5)
Pipecolic acid (4)
Indole (4)
4-Hydroxybenzoic acid (4)
Choline (4)
L-Histidine (4)
L-Isoleucine (4)
Suberic acid (4)
Phenylacetaldehyde (4)
Azelaic acid (4)
Creatine (4)
Taurine (4)
L-Threonine (4)

Modification

15.994915 (1)
57.021464 (1)

Study type

RNA-seq of coding RNA (10)
RNA-seq of non coding RNA (3)
ChIP-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (1102)
2022 (830)
2024 (793)
2023 (774)
2021 (617)
2020 (403)
2019 (256)
2018 (191)
2017 (156)
2026 (146)
2016 (110)
2015 (81)
2014 (62)
2013 (46)
2012 (24)
2011 (15)
2009 (5)
2010 (3)
2008 (1)
2007 (1)
2006 (1)

Lab affiliation

Professor and Director Center of Proteomic Analysis BGI-Shenzhen (6)
Laboratory of Microbiology Oceanography, State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, State Key Laboratory of Ocean Engineering, Shanghai Jiao Tong University, School of Oceanography, Shanghai JiaoTong University (4)
Clinical Laboratory of BGI Health, BGI-Shenzhen, Shenzhen 518083, China (3)
Shenzhen People’s Hospital (3)
Shenzhen Hospital of Southern Medical University (2)
Shenzhen Center for Disease Control and Prevention (2)
BGI-Shenzhen,China (2)
Shenzhen University (2)
Department of Radiation Oncology, Nanfang Hospital, Southern Medical University (1)
College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, 518060, China (1)
the First Affiliated Hospital of Shenzhen University (1)
University/Hospital: the Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital) Street Name & Number: No. 1017, North of Dongmen Road, Shenzhen City, Guangdong Province 518020, China (1)
College of Animal Science and Technology, China Agricultural University, Beijing 100193, China (1)
Laboratory of General Surgery, The First Affiliated Hospital, SunYat-Sen University, Guangzhou, 510080, China (1)
CAS Key Laboratory for Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences (1)
Shenzhen Key Laboratory of Modern Toxicology, Shenzhen Medical Key Discipline of Health Toxicology (2020-2024), Shenzhen Center for Disease Control and Prevention (1)
Department of Rehabilitation Medicine, Dapeng New District Nan’ao People’s Hospital, Rehabilitation Branch of the First Affiliated Hospital of Shenzhen University, Shenzhen, China. (1)
BGI-Shenzhen (1)
Department of Orthopedics, the Eighth Affiliated Hospital of Sun Yat-sen University, Shenzhen 518003, P.R. China (1)
Department of Rheumatology and Immunology, Shenzhen people's hospital, (1)
China National GenBank,BGI-Shenzhen,Shenzhen 518120,China (1)
Department of Rheumatology and Immunology, Shenzhen people's hospital (1)
Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences.Shenzhen 518055，China (1)
The Second Clinical Medical College, Jinan University (1)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology and Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Science. Guangzhou, China (1)
Shenzhen University, China (1)
Department of System Biology, School of Life Sciences, Guangdong Provincial Key Laboratory of Cell Microenvironment and Disease Research, Shenzhen Key Laboratory of Cell Microenvironment, Southern University of Science and Technology, Shenzhen, 518055, China. (1)
State Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, the First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510182, China (1)
Institute for Cancer Research, Shenzhen Bay Laboratory (1)
Institute of Integrative Biology, University of Liverpool (1)