Liu Yang Y - OmicsDI

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Unknown (39489)
Proteomics (879)
Transcriptomics (165)
Metabolomics (101)
Genomics (31)
Multiomics (7)
Other (1)

Organisms

Homo sapiens (538)
Mus musculus (244)
Rattus norvegicus (21)
Arabidopsis thaliana (17)
Oryza sativa (13)
Macaca mulatta (10)
Drosophila melanogaster (6)
Gallus gallus (5)
Zea mays (4)
Danio rerio (3)
Bos taurus (3)
Glycine max (3)
Caenorhabditis elegans (3)
Oryza sativa Indica Group (2)
Ovis aries (2)
Nannospalax galili (1)
Rhodococcus opacus (1)
Haloferax mediterranei (1)
Bos grunniens (1)
Ketogulonicigenium vulgare (1)
Brassica oleracea (1)
Tetrahymena thermophila (1)
Capra hircus (1)
Bemisia tabaci (1)
Gossypium hirsutum (1)
Dirofilaria immitis (1)
Yersinia pestis (1)
Staphylococcus epidermidis (1)
Geobacter sulfurreducens (1)
Setaria italica (1)

Organisms

Sus scrofa (1)
Mus musculus (1)

Repository

pride (486)
iProX (339)
biostudies-arrayexpress (170)
MetaboLights (97)
MassIVE (34)
EGA (22)
PeptideAtlas (17)
GNPS (4)
jPOST (2)
ENA (2)
geo (1)
GPMDB (1)
NODE (1)
PAXDB (1)

Tissue

Cell culture (107)
Epithelial cell (39)
Liver (29)
Brain (25)
Blood plasma (19)
Plant cell (19)
Testis (18)
Heart (14)
Leaf (14)
Lung (13)
Hepatocyte (12)
Permanent cell line cell (12)
Whole body (12)
Plasma Non-glyco (11)
Blood serum (11)
Early embryonic cell (10)
Cell suspension culture (8)
HeLa cell (7)
Skin (7)
Blood cell (6)
Bone marrow (6)
Macrophage (6)
Oocyte (6)
Root (6)
Stem cell (6)
Blood (5)
Kidney (5)
Lymph node (5)
Others (3)
Male Reproductive System (2)

Disease

Disease free (19)
Breast cancer (11)
Colon cancer (11)
Cervix carcinoma (7)
Acute leukemia (6)
Liver cancer (6)
Alzheimer's disease (5)
Cardiovascular system disease (5)
Prostate adenocarcinoma (5)
Hepatocellular carcinoma (3)
Melanoma (3)
Type 2 diabetes mellitus (3)
Brain glioblastoma multiforme (2)
Disease (2)
Lymphoma (2)
Pancreatic cancer (2)
Plasmodium falciparum malaria (2)
Primary immunodeficiency disease (2)
Not Available (1)
Alzheimer's disease 18 (1)
Aortic dissection (1)
Bladder neck obstruction (1)
Brain cancer (1)
COVID-19 (1)
Cancer (1)
Carcinoma (1)
Cerebrovascular disease (1)
Cholangiocarcinoma (1)
Chronic obstructive pulmonary disease (1)
Endometrial Endometrioid Adenocarcinoma (1)

Technology Type

Mass Spectrometry (486)
Shotgun proteomics (223)
Mass spectrometry (86)
Bottom-up proteomics (69)
Gel-based experiment (50)
Data-dependent acquisition (47)
Affinity purification coupled with mass spectrometry proteomics (32)
Data-independent acquisition (29)
Top-down proteomics (28)
SWATH MS (12)
Proteogenomics (11)
Chemical cross-linking coupled with mass spectrometry proteomics (10)
Mass spectrometry assay (7)
Immunopeptidomics (5)
NMR spectroscopy (4)
All-ion fragmentation (3)
Illumina HiSeq 2000, ILLUMINA (2)
DiaPASEF (2)
MSE (2)
Mass spectrometry imaging (2)
Affymetrix/Illumina (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Glycoproteomics (1)
Olink affinity proteomics (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (44)
LTQ Orbitrap Velos (16)
Q Exactive (7)
Orbitrap Fusion Lumos (4)
SepSolve GCxGC-BenchTOF (4)
MS:1000031 (3)
Q Exactive HF (3)
Illumina HiSeq 2000 (2)
LTQ FT (2)
LTQ Orbitrap XL (2)
Agilent GC-qTOF (2)
Orbitrap Fusion ETD (2)
LTQ Orbitrap (2)
Ilumina HiScan H166 (1)
Illumina iScan (1)
Affymetrix Fluidics Station 400 (1)
HiSeq X Ten (1)
Illumina HiSeq 2500 (1)
LCQ Classic (1)
MaXis (1)
Instrument (1)
GCqTOF Agilent (1)
MALDI LTQ Orbitrap (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion (1)
Pegasus 4D (1)
Q Exactive HF-X (1)
Q Exactive mass spectrometer (Thermo Scientific) (1)
TripleTOF 5600 (1)

Publication Date

2022 (159)
2025 (153)
2024 (152)
2023 (149)
2021 (101)
2026 (95)
2020 (46)
2015 (38)
2014 (38)
2013 (36)
2019 (32)
2012 (31)
2017 (27)
2018 (23)
2016 (22)
2010 (14)
2011 (9)
2009 (8)
2008 (6)
2005 (6)
2007 (5)
2006 (1)

UNIPROT ID/AC

3BHS1_MACMU (1)
9544.ENSMMUP00000000029 (1)
9544.ENSMMUP00000000072 (1)
9544.ENSMMUP00000000075 (1)
9544.ENSMMUP00000000192 (1)
9544.ENSMMUP00000000231 (1)
9544.ENSMMUP00000000270 (1)
9544.ENSMMUP00000000273 (1)
9544.ENSMMUP00000000300 (1)
9544.ENSMMUP00000000331 (1)
9544.ENSMMUP00000000335 (1)
9544.ENSMMUP00000000399 (1)
9544.ENSMMUP00000000400 (1)
9544.ENSMMUP00000000529 (1)
9544.ENSMMUP00000000584 (1)
9544.ENSMMUP00000000645 (1)
9544.ENSMMUP00000000701 (1)
9544.ENSMMUP00000000740 (1)
9544.ENSMMUP00000000788 (1)
9544.ENSMMUP00000000800 (1)
9544.ENSMMUP00000000801 (1)
9544.ENSMMUP00000000832 (1)
9544.ENSMMUP00000000870 (1)
9544.ENSMMUP00000000898 (1)
9544.ENSMMUP00000000905 (1)
9544.ENSMMUP00000000981 (1)
9544.ENSMMUP00000001028 (1)
9544.ENSMMUP00000001049 (1)
9544.ENSMMUP00000001078 (1)
9544.ENSMMUP00000001171 (1)

ENSEMBL ID

ENSG00000170477 (16)
ENSG00000147251 (8)
ENSG00000247315 (5)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:17368 (39)
CHEBI:16704 (38)
CHEBI:30769 (36)
CHEBI:16335 (34)
CHEBI:16708 (34)
CHEBI:17596 (34)
CHEBI:17154 (33)
CHEBI:17568 (33)
CHEBI:17351 (32)
CHEBI:17750 (32)
CHEBI:15354 (31)
CHEBI:15741 (31)
CHEBI:16737 (31)
CHEBI:16750 (31)
CHEBI:30915 (31)
CHEBI:16040 (30)
CHEBI:16359 (30)
CHEBI:17509 (30)
CHEBI:32816 (30)
CHEBI:15756 (29)
CHEBI:15891 (29)
CHEBI:16196 (29)
CHEBI:7916 (29)
CHEBI:16919 (28)
CHEBI:17015 (28)
CHEBI:17821 (28)
CHEBI:17895 (28)
CHEBI:55328 (28)
CHEBI:16235 (27)
CHEBI:17748 (27)

Metabolite Name

Hypoxanthine (26)
Adenosine (23)
Adenine (20)
Guanosine (20)
Inosine (20)
Uracil (20)
Uridine (20)
Creatinine (19)
Cholic acid (18)
Choline (17)
Taurine (17)
Thymidine (17)
Betaine (16)
L-Tyrosine (16)
Xanthine (16)
Cytidine (15)
Guanine (15)
Indole (15)
L-Carnitine (15)
Uric acid (15)
Creatine (14)
Cytosine (14)
L-Arginine (14)
Riboflavin (14)
Sphinganine (14)
Valine (14)
Azelaic acid (13)
L-Histidine (13)
L-Phenylalanine (13)
L-Proline (13)

First Public Date

2022 (1)
2014 (1)

Modification

4x(2)H labeled dimethylated L-lysine (2)
15.994915 (1)
57.021464 (1)

Study type

Transcription profiling by array (80)
RNA-seq of coding RNA (44)
ChIP-chip by tiling array (10)
Comparative genomic hybridization by array (8)
Other (8)
RNA-seq of non coding RNA (7)
ChIP-seq (4)
Unknown experiment type (2)
Methylation profiling by array (2)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by SAGE (1)
Genotyping by array (1)
Transcription profiling by RT-PCR (1)

Release Date

2025 (6767)
2022 (5644)
2024 (5222)
2023 (5199)
2021 (4081)
2020 (2992)
2019 (2039)
2018 (1652)
2017 (1376)
2016 (1076)
2026 (1007)
2015 (831)
2014 (604)
2013 (385)
2012 (300)
2011 (154)
2010 (117)
2009 (74)
2008 (49)
2007 (33)
2006 (21)
2005 (19)
2003 (7)
2004 (4)
2001 (3)
2002 (2)
2000 (1)

Lab affiliation

Institutes of Biomedical Sciences and department of Chemistry, Fudan University, Shanghai, China (6)
Professor and Director Center of Proteomic Analysis BGI-Shenzhen (6)
West China Second University Hospital, Sichuan University (4)
BGI Research (3)
Beijing proteome research center (3)
Department of Clinical Laboratory, Shanghai Tenth People’s Hospital of Tongji University, Shanghai, 200072, China (3)
The University of Sydney (3)
Beijing Key Laboratory of Protein Posttranslational Modifications and Cell Function, Department of Biochemistry and Biophysics, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, 100191, China. (2)
CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China (2)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology and Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Science. Guangzhou, China (2)
Center for Stem Cell Biology and Tissue Engineering, Key Laboratory for Stem Cells and Tissue Engineering, Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, China. (2)
Center for Translational Medicine, The Affiliated Zhangjiagang Hospital of Soochow University, Suzhou Medical College of Soochow University (2)
College of Pharmacy, Jinan University, Guangzhou, China (2)
Cornell University (2)
Department of Biochemistry and Biophysics, School of Basic Medical Sciences, Peking University Health Science Center, #38 Xueyuan Road, Beijing 100191, China (2)
Department of Biochemistry and Structural Biology and Center for Innovative Drug Discovery School of Medicine, University of Texas Health Science Center at San Antonio, 7703 Floyd Curl Drive, San Antonio, TX 78229, United States (2)
Department of Cardiology, Jiangbin Hospital of Guangxi Zhuang Autonomous Region, No. 85 Hedi Road, Nanning, Guangxi, 530021, China (2)
Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
Department of Laboratory Medicine, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China. (2)
Department of Structural Biology and Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (2)
Division of Life Science, The Hong Kong University of Science and Technology, Hong Kong SAR, China (2)
Genecology Research Centre, University of the Sunshine Coast, Maroochydore DC, QLD 4558, Australia (2)
Human Phenome Institute,Zhangjiang FudanInternational Innovation Center, Fudan UniversityShanghai, 201203, China. (2)
Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang University (2)
Jinan University (2)
Key Laboratory for Experimental Teratology of the Ministry of Education, Advanced Medical Research Institute, Qilu Hospital, Cheeloo College of Medicine, Shandong University (2)
Lab of Jie Zheng, Neuroscience Research Institute and Department of Neurobiology, School of Basic Medical Sciences, Peking University, Beijing 100083, P.R. China (2)
Nanjing Medical University (2)
National Center for Protein Science Beijing (2)
New Cornerstone Science Laboratory, State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University, Chengdu, China (2)

Tags

xref:PubMed:22561152 (1)

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The partial mitochondrial genome of Semidalis anchoroides Liu & Yang, 1993 (Neuroptera: Coniopterygidae).

Not available

S-EPMC11587714 | biostudies-literature

Complete chloroplast genome sequences of Sinosenecio baojingensis Ying Liu & Q.E. Yang (Asteraceae).

Not available

S-EPMC9278445 | biostudies-literature

Complete chloroplast genome of Sinosenecio jishouensis D.G. Zhang, Ying Liu & Q. E. Yang (Asteraceae), a narrow endemic species in Wuling Mountain Region, China.

Not available

S-EPMC7995908 | biostudies-literature

Expression data from mouse skeletal muscle

We generated skeletal muscle-specific knockout mice lacking the transcription factor Yin Yang 1 (YY1) and analyzed expression patterns in the skeletal muscle these mice. We used microarrays to detail the global programme of gene expression regulated by YY1. Wild type or knockout mice at 6 months wer...

ORGANISM(S): Mus musculus

2012-06-29 | E-GEOD-39009 | biostudies-arrayexpress

Newly reported chloroplast genome of Sinosenecio albonervius Y. Liu & Q. E. Yang and comparative analyses with other Sinosenecio species.

Not available

S-EPMC9454173 | biostudies-literature

PHSP-Net: Personalized Habitat-Aware Deep Learning for Multi-Center Glioblastoma Survival Prediction Using Multiparametric MRI.

Not available

S-EPMC12467337 | biostudies-literature

Efficacy of Liu-zi-jue in Patients with 2019 Novel Coronavirus Pneumonia (COVID-19): structured summary of a study protocol for a randomized controlled trial.

Not available

S-EPMC7245505 | biostudies-literature

Studies on the Stenothemusharmandi species-group (Coleoptera, Cantharidae), with descriptions of two new species from China.

Not available

S-EPMC8410756 | biostudies-literature

Transcriptomics and metabolomics of engineered Synechococcus elongatus during photomixotrophic growth

BACKGROUND: Converting carbon dioxide (CO2) into value-added chemicals using engineered cyanobacteria is a promising strategy to tackle the global warming and energy shortage issues. However, most cyanobacteria are autotrophic and use CO2 as a sole carbon source, which makes it h...

2022-03-21 | MTBLS2825 | MetaboLights

Small molecule inhibits respiratory syncytial virus entry and infection by blocking the interaction of the viral fusion protein with the cell membrane.

Not available

S-EPMC6404555 | biostudies-literature

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