Live-cell - OmicsDI

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Mus musculus (793)
Homo sapiens (683)
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mouse gut metagenome (2)
unidentified (2)
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Mass Spectrometry (278)
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MSE (3)
SRM/MRM (3)
DiaPASEF (2)
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Cellarium (1)
ESI (1)
Mass spectrometry imaging (1)
RNA mass spectrometry (1)
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HDMSE (1)

Instrument Platform

Illumina NovaSeq 6000 (115)
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Illumina HiSeq 4000 (47)
Illumina HiSeq 2500 (28)
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MA900, Sony (2)
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HiSeq X Ten (2)
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Digital Alliance of Canada (1)
AAV-CRISPR (1)
10X Dual Index Kit (1)
10X Chromium Next GEM Single-Cell 3' Kit v3.1 (1)
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STAR v2.5.3a, rpkmforgenes, RSeQC 2.6.1 (1)

Publication Date

2025 (229)
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2013 (114)
2020 (106)
2010 (93)
2015 (80)
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2016 (66)
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2011 (41)
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2004 (1)
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UNIPROT ID/AC

Q13309 (2)
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CHEBI ID

CHEBI:15741 (11)
CHEBI:15428 (10)
CHEBI:32816 (10)
CHEBI:16027 (10)
CHEBI:30769 (10)
CHEBI:16708 (9)
CHEBI:28842 (9)
CHEBI:6650 (9)
CHEBI:18012 (9)
CHEBI:16235 (8)
CHEBI:15891 (8)
CHEBI:30915 (8)
CHEBI:16113 (7)
CHEBI:17553 (7)
CHEBI:28875 (7)
CHEBI:17148 (7)
CHEBI:16610 (7)
CHEBI:17154 (7)
CHEBI:15422 (5)
CHEBI:16991 (4)
CHEBI:35868 (2)
CHEBI:35610 (2)
CHEBI:25000 (2)
CHEBI:70727 (2)
CHEBI:63632 (2)
CHEBI:15996 (2)
CHEBI:17552 (2)
CHEBI:26523 (1)
CHEBI:17489 (1)
CHEBI:33699 (1)

Metabolite Name

Uracil (6)
Thymine (6)
Methionine (5)
Taurine (5)
Adenosine (5)
Hypoxanthine (5)
N6,N6,N6-Trimethyl-L-lysine (4)
Adenine (4)
Glycine (4)
Thiamine (4)
Putrescine (4)
Succinic acid (4)
Acetylcholine (4)
Choline (4)
Fumaric acid (4)
Nonanoic acid (4)
Citric acid (4)
Stearic acid (4)
Malic acid (4)
Oleamide (4)
Serine (4)
Spermidine (4)
N-Acetylputrescine (4)
Isoleucine (4)
Glucose (4)
Adenine (4)
Glutamic acid (4)
Myristic acid (4)
Aspartic acid (4)
Cytidine (4)

First Public Date

2025 (353)
2024 (281)
2026 (279)
2023 (232)
2022 (210)
2021 (161)
2020 (108)
2019 (86)
2014 (71)
2017 (62)
2018 (61)
2016 (28)
2015 (26)
2013 (20)
2010 (1)

Modelling Approach

Ordinary differential equation model (10)
Computational model (1)
Logical model (1)

Study status

Not yet recruiting (2)
Recruiting (2)

Lab affiliation

Technical University Munich, Faculty of Medicine, Institute of Virology, Viral Immunopathology, Schneckenburger Str. 8, D-81675 Munich, Germany (4)
Charles University, Faculty of Pharmacy in Hradec Králové Department of Analytical Chemistry Akademika Heyrovského 1203/8 500 05 Hradec Králové, Czech Republic (4)
Crick-GSK LinkLabs, UK (3)
Institute of Clinical Chemistry, University Medical Center Goettingen (3)
State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China. (3)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (3)
Functional Proteomics, ICR (3)
1The Rappaport Faculty of Medicine and Research Institute, Haifa 3109601, Israel; 2Network Biology Research Laboratories, Technion-Israel Institute of Technology, Haifa 3200003, Israel (2)
Department of Laboratory Medicine, UCSF (2)
School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, NG7 2UH (2)
Cellzome (2)
University Medical Center Goettingen, Department of Clinical Chemistry, Core Facility Proteomics (2)
MRC Toxicology Unit, University of Cambridge (2)
Shanghai Institute of Materia Medica (2)
Shenyang Agricultural University (2)
Pacific Northwest National Laboratory, USA (2)
University of Maryland, College Park (2)
Centre for Functional Protein Assemblies, Technical University of Munich, Ernst-Otto-Fischer-Straße 8, D-85748 Garching, Germany. (1)
Department of Immunology, St. Jude Children's Research Hospital (1)
1. Competence Centre on Health Technologies, Tiigi 61b, Tartu, Estonia 2. Chair of Obstetrics and Gynaecology, Institute of Biomedicine, University of Tartu, Ravila 19, Tartu, Estonia (1)
Centre for Medicines Discovery, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK (1)
Microbiology, Immunology, and Pathology (1)
1Department of Chemistry & Biochemistry, University of Maryland, College Park, MD 20742 (1)
1Research Institute of the McGill University Health Centre, Montreal, QC, Canada 2Department of Pathology, McGill University, Montreal, QC, Canada 3Gerald Bronfman Department of Oncology, McGill University, Montreal, QC, Canada (1)
Molecular Cell Biology, Weizmann Institute of Science (1)
Professor of Pharmaceutical Sciences & Moulder Center for Drug Discovery Professor Lewis Katz School of Medicine Member Fox Chase Cancer Institute Director of Proteomics/Metabolomics Temple University School of Pharmacy 3307 N Broad Street Room 552 Philadelphia, PA 19140 Tel: 215 707 9228 (1)
Pharmaceutical Biotechnology, Eberhard Karls University Tübingen, Germany (1)
Full professor, Federal University of São Paulo, Brazil. (1)
Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore, 117543 (1)
Integrative omics, Pacific Northwest National Labs (1)

Keyword

Lexatumumab (1)
Cetuximab (1)
Panitumumab (1)
Albumin-Bound Paclitaxel (1)
Ramucirumab (1)
Irinotecan (1)
Intestinal microbiota transplantation (1)
Oxaliplatin (1)
Calcium, Dietary (1)
Folic Acid (1)
Paclitaxel (1)
Antineoplastic Agents, Immunological (1)
Irinotecan (1)
Camptothecin (1)
Antibodies (1)
Immunoglobulins (1)
Antibodies, Monoclonal (1)
Leucovorin (1)
Fluorouracil (1)
Calcium (1)
Levoleucovorin (1)

IsPrivate

False (12)

Submitter Keywords

Ersilia (1)
FAIR-AIML (1)
Machine Learning Model (1)
TransQST (1)

Classification

bacteria (15)
helminths (2)
protozoa (2)
viruses (1)

Study type

Transcription profiling by array (241)
RNA-seq of coding RNA from single cells (174)
RNA-seq of coding RNA (109)
ChIP-chip by tiling array (77)
ChIP-seq (73)
Unknown experiment type (12)
Animal - Single-cell sequencing (8)
ATAC-seq (8)
RNA-seq of total RNA (8)
Comparative genomic hybridization by array (7)
DNA-seq (6)
Methylation profiling by high throughput sequencing (6)
RNA-seq of non coding RNA (6)
Human - Single-cell sequencing (5)
Cell line - High-throughput sequencing (5)
Methylation profiling by array (5)
Human - High-throughput sequencing (4)
CUT&RUN (4)
Cell line - Single-cell sequencing (3)
Differential (3)
High-throughput sequencing (3)
ScATAC-seq (3)
Single nucleus RNA sequencing (3)
Baseline (2)
Animal - High-throughput sequencing (2)
Genotyping by array (2)
Bisulfite-seq (2)
Other (2)
MicroRNA profiling by array (2)
Human - Two-color microarray (1)

Release Date

2022 (1400)
2025 (1299)
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2021 (1203)
2024 (1170)
2020 (1150)
2019 (884)
2018 (862)
2017 (728)
2016 (718)
2015 (667)
2014 (538)
2013 (457)
2012 (377)
2010 (311)
2011 (278)
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2009 (176)
2008 (160)
2007 (101)
2006 (73)
2005 (65)
2004 (28)
2003 (20)
2002 (16)
2000 (10)
1998 (9)
2001 (8)
1997 (3)
1999 (2)

Location

United Kingdom (2)
United States (1)

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Single-cell thiol profiling enabled by live-cell labeling reveals metabolic heterogeneity in ferroptosis

Raw data of both bulk and single-cell metabolomics. It includes all MS, LC-MS and LC-MS/MS raw data associated with the article 'Single-cell thiol profiling enabled by live-cell labeling reveals metabolic heterogeneity in ferroptosis'.

2026-02-14 | MTBLS13900 | MetaboLights

Single-cell Profiling of Cationic and Anionic Metabolites in Live Frog (Xenopus) Embryos using Microprobe Capillary Electrophoresis Mass Spectrometry

Not available

ORGANISM(S): Xenopus laevis

ST001032 | MetabolomicsWorkbench

Live-seq for live cell transcriptome profiling

PRJNA591913 | ENA

High-speed live cell interferometry for screening bioprinted organoids

PRJNA904813 | ENA

Live-cell transcriptomics with engineered virus-like particles

PRJNA1303199 | ENA

Live single-cell RNA-sequencing data from ALS donors only.