Lynn W W - OmicsDI

Show results for

Transcriptomics (148)
Unknown (140)
Genomics (23)
Proteomics (21)
Metabolomics (10)

Organisms

Homo sapiens (73)
Mus musculus (56)
Eohaustorius estuarius (11)
Bos taurus (10)
Colinus virginianus (7)
Rattus norvegicus (7)
Pimephales promelas (4)
Daphnia magna (3)
Lepidium sativum (3)
Escherichia coli (2)
Drosophila melanogaster (2)
Canis lupus familiaris (2)
x Triticosecale sp. (1)
Listeria monocytogenes 08-5923 (1)
Enterococcus faecalis V583 (1)
Caenorhabditis elegans (1)
Danio rerio (1)
Arabidopsis thaliana (1)
Plasmodium (1)

Repository

biostudies-arrayexpress (150)
EGA (22)
pride (13)
MetaboLights (10)
MassIVE (6)
jPOST (1)

Tissue

Epithelial cell (9)
Blood (1)
Blood plasma (1)
Cell culture (1)
Femorotibial joint (1)
Leukocyte (1)
Macrophage (1)
Saliva (1)
Salivary gland (1)

Disease

Colon cancer (9)
Normal (2)
Liposarcoma (1)
Acute Myeloid Leukemia (1)
Cardiovascular system disease (1)
Osteoarthritis (1)

Technology Type

Mass Spectrometry (13)
Mass spectrometry (10)
Affinity purification coupled with mass spectrometry proteomics (7)
Shotgun proteomics (4)
Bottom-up proteomics (2)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Affymetrix 6.0 (1)
Illumina 1.2M, Affymetrix 6.0 (1)
Illumina HumanHap 550K, Illumina HumanHap300-Duo (1)
NextSeq 500, Illumina HiSeq 4000, ILLUMINA (1)
Data-dependent acquisition (1)

Instrument Platform

Exactive (Thermo Scientific) (5)
LTQ Orbitrap (3)
Illumina HiSeq 2500 (2)
Illumina NovaSeq 6000 (2)
Illumina HiSeq 4000 (2)
Q Exactive HF (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Illumina Hybridisation Oven (1)
IScan (1)
Illumina iScan (1)
Illumina Genome Analyzer (1)
G2565BA DNA microarray scanner [Agilent] (1)
ScanArray Express HT [PerkinElmer] (1)
Scanning hardware (1)
Illumina (1)
Illumina MiSeq (1)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
Orbitrap Fusion (1)
Q Exactive (1)
Direct infusion MS - negative (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2014 (27)
2010 (19)
2015 (17)
2013 (16)
2011 (16)
2012 (14)
2008 (14)
2019 (11)
2022 (7)
2016 (7)
2004 (6)
2007 (5)
2026 (4)
2025 (4)
2021 (4)
2017 (2)
2006 (2)
2020 (2)
2018 (1)
2009 (1)
2024 (1)

CHEBI ID

CHEBI:133207 (5)
CHEBI:133219 (5)
CHEBI:133220 (5)
CHEBI:133221|CHEBI:133222|CHEBI:27823 (5)
CHEBI:15560 (5)
CHEBI:15929 (5)
CHEBI:18446|CHEBI:18436|CHEBI:18473 (5)
CHEBI:29043|CHEBI:38266|CHEBI:133208|CHEBI:133210|CHEBI:133211|CHEBI:80494 (5)
CHEBI:49265 (5)
CHEBI:15756 (2)
CHEBI:16196 (2)
CHEBI:17351 (2)
CHEBI:17418 (2)
CHEBI:27781 (2)
CHEBI:28484 (2)
CHEBI:28716 (2)
CHEBI:28875 (2)
CHEBI:30776 (2)
CHEBI:30805 (2)
CHEBI:45571 (2)
CHEBI:52961 (2)
CHEBI:72689 (2)
CHEBI:72959 (2)
CHEBI:73024 (2)
CHEBI:73061 (2)
CHEBI:73067 (2)
CHEBI:84372 (2)
CHEBI:10049 (1)
CHEBI:10072 (1)
CHEBI:10093 (1)

Metabolite Name

1-acetylindole-3-carboxaldehyde (5)
2-oxindole-3-acetic acid|5-methoxyindole-2-carboxylic acid|5-hydroxyindole-3-acetic acid (5)
3-oxo-2-(2-(Z)-pentenyl)-cyclopentane-1-octanoic acid (5)
Cis-zeatin-O-glucoside|trans-zeatin-O-glucoside|cis-zeatin-9-glucoside|trans-zeatin-9-glucoside|cis-zeatin-7-glucoside|trans-zeatin-7-glucoside (5)
Cis/trans-12-oxo-phytodienoic acid (5)
Cucurbic acid|9,10-dihydrojasmonic acid (5)
Jasmonic acid methyl ester (5)
Tuberonic acid (5)
Tuberonic acid methyl ester (5)
(1'S,2R,2'R,10'S,11'S,15'S)-17'-hydroxy-2',15'-dimethylspiro[oxolane-2,14'-tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane]-6',8'-diene-5,5'-dione (1)
(1-{1-[(4-hydroxy-3-methoxyphenyl)methyl]-7,8-dimethoxy-2,2-dimethyl-1,2,3,4-tetrahydro-2λ⁵-isoquinolin-2-yl}ethylidene)-λ⁴-oxidanyliumyl (1)
(10,14a-dihydroxy-2,2,4a,6a,6b,9,9,12a-octamethyl-docosahydropicen-13-yl)oxidanesulfonic acid (1)
(10S,14S)-10,14,20-trimethyl-16-methylidene-22-azahexacyclo[12.10.0.0²,¹¹.0⁵,¹⁰.0¹⁵,²³.0¹⁷,²²]tetracosan-5-ylium-7-olate (1)
(12aR)-4-(dimethylamino)-4a,5,10,12a-tetrahydroxy-6-methylidene-1,2,3,4,4a,5,5a,6,11,11a,12,12a-dodecahydrotetracene-1,3,11,12-tetrone (1)
(12aR)-7-chloro-4-(dimethylamino)-4,6,10,12a-tetrahydroxy-1,2,3,4,4a,5,5a,6,11,11a,12,12a-dodecahydrotetracene-1,3,11,12-tetrone (1)
(12aS)-4,7-bis(dimethylamino)-10,12,12a-trihydroxy-1,3,11-trioxo-9-(2-oxoacetamido)-1,2,3,4,4a,5,5a,6,11,11a,12,12a-dodecahydrotetracene-2-carboximidic acid (1)
(12aS)-9-{[2-(tert-butylamino)-1-hydroxyethylidene]amino}-4,7-bis(dimethylamino)-5,10,12,12a-tetrahydroxy-1,3,11-trioxo-1,2,3,4,4a,5,5a,6,11,12a-decahydrotetracene-2-carboximidic acid (1)
(13-{[5-(acetyloxy)-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-1,6,6,11,15-pentamethyl-14-(6-methylhept-5-en-2-yl)-5-[(3,4,5-trihydroxyoxan-2-yl)oxy]tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-7-en-9-yl)oxidanesulfonic acid (1)
(13R)-5-(3,4-dihydroxyphenyl)-6,9,17,19,21-pentahydroxy-13-(4-hydroxyphenyl)-4,12,14-trioxapentacyclo[11.7.1.0²,¹¹.0³,⁸.0¹⁵,²⁰]henicosa-2(11),3(8),5,9,15,17,19-heptaen-7-one (1)
(15Z)-Octadec-15-en-9,11,13-triynoic acid (1)
(1R)-1,4-bis({[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy})-3-hydroxy-5-(sulfooxy)cyclohexane-1-carboxylic acid (1)
(1R,16Z,24E,26E,28Z)-1,18,26,27-tetrahydroxy-19,30-dimethoxy-12-[1-(3-methoxy-4-oxocyclohexyl)propan-2-yl]-15,17,21,23,29,35-hexamethyl-11,36-dioxa-4-azatricyclo[30.3.1.0⁴,⁹]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone (1)
(1R,16Z,24E,26E,28Z)-1,18-dihydroxy-12-[1-(4-hydroxy-3-methoxycyclohexyl)propan-2-yl]-19,30-dimethoxy-15,17,21,23,29-pentamethyl-35-methylidene-11,36-dioxa-4-azatricyclo[30.3.1.0⁴,⁹]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone (1)
(1R,2R,3R,11S,12S,14R,26R)-5,6',7',12-tetrahydroxy-6-methoxy-7,21,30-trimethyl-27-oxo-3',4'-dihydro-2'H-17,19,28-trioxa-24-thia-13,30-diazaspiro[heptacyclo[12.9.6.1³,¹¹.0²,¹³.0⁴,⁹.0¹⁵,²³.0¹⁶,²⁰]triacontane-26,1'-isoquinoline]-4(9),5,7,15(23),16(20),21-hexaen-22-yl acetate (1)
(1R,2S,3R,4R,5S,6R,7S)-1,3,4,5,7,8,9,10,10-Nonachlorotricyclo[5.2.1.0²,⁶]dec-8-ene (1)
(1R,6S,12R,15S)-5,5-Dimethyl-11,13-dioxatetracyclo[7.5.1.0¹,⁶.0¹²,¹⁵]pentadec-8-ene (1)
(1R,9S,18Z,24R)-12-[1-(4-chloro-3-hydroxycyclohexyl)prop-1-en-2-yl]-17-ethyl-1,14-dihydroxy-23,25-dimethoxy-13,19,21,27-tetramethyl-11,28-dioxa-4-azatricyclo[22.3.1.0⁴,⁹]octacos-18-ene-2,3,10,16-tetrone (1)
(1R,9S,18Z,24R)-12-[1-(4-chloro-3-methoxycyclohexyl)prop-1-en-2-yl]-17-ethyl-1,14-dihydroxy-13-(hydroxymethyl)-23,25-dimethoxy-19,21,27-trimethyl-11,28-dioxa-4-azatricyclo[22.3.1.0⁴,⁹]octacos-18-ene-2,3,10,16-tetrone (1)
(1S)-1,3,4-trihydroxy-5-(sulfooxy)cyclohexane-1-carboxylic acid (1)
(1S,16Z,24E,26E,28Z)-1,18-dihydroxy-12-{1-[4-(2-hydroxyethoxy)-3-methoxycyclohexyl]propan-2-yl}-15-(hydroxymethyl)-19,30-dimethoxy-17,21,23,29,35-pentamethyl-11,36-dioxa-4-azatricyclo[30.3.1.0⁴,⁹]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone (1)

Study type

Transcription profiling by array (107)
RNA-seq of coding RNA (18)
Methylation profiling by array (5)
RNA-seq of non coding RNA (5)
Comparative genomic hybridization by array (4)
Unknown experiment type (3)
Cell line - Methylation microarray (1)
ChIP-chip by tiling array (1)
Animal - High-throughput sequencing (1)
ChIP-chip by array (1)
Antigen profiling (1)
Other (1)
ChIP-seq (1)
MicroRNA profiling by array (1)

Release Date

2015 (27)
2014 (23)
2022 (22)
2010 (20)
2013 (19)
2011 (19)
2012 (17)
2021 (15)
2018 (15)
2008 (15)
2025 (14)
2016 (13)
2024 (13)
2023 (12)
2017 (9)
2020 (7)
2019 (6)
2009 (6)
2004 (6)
2007 (5)
2026 (4)
2006 (3)

Lab affiliation

Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (7)
Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (1)
Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany (1)
Department of Clinical Sciences, Cornell University, Ithaca, NY, USA Department of Surgical and Radiological Sciences, School of Veterinary Medicine, University of California-Davis, Davis, CA, USA (1)
Nanyang Technological University (1)
Section for Oral Medicine and Oral Pathology, Department of Odontology, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark (1)
University of Pennsylvania, Cell and Developmental Biology, Epigenetics Institute (1)

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Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016.

Not available

S-EPMC6832845 | biostudies-literature

Coordinated responses to individual tumor antigens by IgG antibody and CD8+ T cells following cancer vaccination.

Not available

S-EPMC5885379 | biostudies-literature

Meta-analytic evidence that mindfulness training alters resting state default mode network connectivity.

Not available

S-EPMC9293892 | biostudies-literature

Subfossil bald cypress trees suggest localized, enduring effects of major climatic episodes on the Southeast Atlantic Coast of the United States

Not available

S-EPMC12184491 | biostudies-literature

1240. Persistence of Circulating Antibody Through 12 Months Following Vaccination With a 20-Valent Pneumococcal Conjugate Vaccine in Adults 60–64 Years of Age

Not available

S-EPMC7776953 | biostudies-literature

Transcription profiling of adult male whole MutaMouse lung with its immortalized 100% confluent epithelial lung cell line counterpart (Affymetrix)

Biological comparison of gene expression profiles of adult male whole Muta™Mouse lung with its immortalized 100% confluent epithelial lung cell line counterpart. White, P.A.,et al. 2003. Development and characterization of an epithelial cell line from Muta™Mouse lung. Environ Mol Mutagen 42,3 pgs...

ORGANISM(S): Mus musculus

2004-07-01 | E-MEXP-110 | biostudies-arrayexpress

Transcription profiling of the radicle and micropylar endosperm cap of Lepidium seeds during germination in control medium

An experiment was performed to compare global transcription patterns in three tissues of Lepidium sativum seeds at different times during imbibition leading up to, but not including, radicle protrusion from the seed (e.g. germination). RNA extractions from the three tissues were hybridised to CATMA ...

ORGANISM(S): Lepidium sativum

2010-06-23 | E-TABM-745 | biostudies-arrayexpress

Transcription profiling of the radicle and micropylar endosperm cap of Lepidium seeds during germination in ABA

An experiment was performed to compare global transcription patterns in two tissues of Lepidium sativum seeds at different times during imbibition leading up to, but not including, radicle protrusion from the seed (e.g. germination). RNA extractions from the two tissues were hybridised to CATMA Arab...

ORGANISM(S): Lepidium sativum

2010-10-02 | E-TABM-743 | biostudies-arrayexpress

Conversion of Chromium(III) Propionate to Chromate/dichromate(VI) by the Advanced Oxidation Process. Pretreatment of a Biomimetic Complex for Metal Analysis.

Not available

S-EPMC1827027 | biostudies-literature

Mechanism of Gastroesophageal Reflux in Obstructive Sleep Apnea: Airway Obstruction or Obesity?

Not available

S-EPMC4702204 | biostudies-literature