Lyu Yang Y - OmicsDI

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Unknown (628)
Proteomics (37)
Metabolomics (4)
Transcriptomics (1)

Organisms

Andropogon gerardi (16)
Bacteria (16)
Canis lupus familiaris (16)
Clostridium perfringens (16)
Cnidaria (16)
Cricetulus griseus (16)
Eukaryota (16)
Fasciola (16)
Hepatitis B virus (16)
Human betaherpesvirus 5 (16)
Madurella mycetomatis (16)
Mesocricetus auratus (16)
Miscanthus x giganteus (16)
Mus musculus (16)
Mycobacterium tuberculosis (16)
Orthoflavivirus (16)
Panicum virgatum (16)
Platyhelminthes (16)
Pseudomonas aeruginosa AES-1R (16)
Rattus norvegicus (16)
Saccharomyces cerevisiae (16)
Schizosaccharomyces pombe (16)
Severe acute respiratory syndrome coronavirus 2 (16)
Shigella (16)
Sorghastrum nutans (16)
Homo sapiens (15)
Mus musculus (3)
Severe acute respiratory syndrome coronavirus 2 (3)
Drosophila simulans (1)
Rattus norvegicus (1)

Repository

iProX (20)
pride (16)
MetaboLights (4)
biostudies-arrayexpress (1)
MassIVE (1)

Tissue

Leaf (5)
Cell culture (3)
Epithelial cell (3)
Plant cell (3)
Colon (2)
Permanent cell line cell (2)
Blood plasma (1)
Breast cancer cell line (1)
Hepatocyte (1)
Shoot (1)

Disease

Disease free (5)
Influenza (2)
Acute leukemia (1)
Colon cancer (1)
Nephrolithiasis (1)

Technology Type

Mass Spectrometry (16)
Shotgun proteomics (5)
Mass spectrometry (4)
Bottom-up proteomics (3)
Data-dependent acquisition (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)
Immunopeptidomics (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (3)
Liquid Chromatography MS - negative - reverse phase (3)
Orbitrap Fusion Lumos (1)
Q Exactive (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2024 (11)
2025 (10)
2026 (7)
2023 (6)
2022 (3)
2021 (2)
2020 (2)
2013 (1)

CHEBI ID

CHEBI:34719 (2)
CHEBI:5445 (2)
CHEBI:74717 (2)
CHEBI:178112 (2)
CHEBI:34687 (2)
CHEBI:17626 (2)
CHEBI:17521 (2)
CHEBI:15901 (2)
CHEBI:28238 (2)
CHEBI:28592 (2)
CHEBI:46961 (2)
CHEBI:16040 (2)
CHEBI:17066 (2)
CHEBI:16708 (2)
CHEBI:87625 (2)
CHEBI:30832 (2)
CHEBI:28875 (2)
CHEBI:64294 (2)
CHEBI:34698 (2)
CHEBI:30746 (2)
CHEBI:15773 (2)
CHEBI:27373 (2)
CHEBI:17821 (2)
CHEBI:17154 (2)
CHEBI:15929 (2)
CHEBI:16566 (2)
CHEBI:27468 (2)
CHEBI:16196 (2)
CHEBI:116314 (2)
CHEBI:16335 (2)

Metabolite Name

Benzoic acid (3)
4-Hydroxybenzaldehyde (3)
N-Formylmethionine (3)
L-Leucine (3)
Guaiacyl phenylacetate (2)
2,4,6-Tri-tert-butylphenol (2)
[(2R)-2-(14-methylhexadecanoyloxy)-3-phosphonooxypropyl] docosanoate (2)
1-(11Z-octadecenoyl)-2-(9Z-hexadecenoyl)-sn-glycero-3-phosphocholine (2)
Dl-Methamphetamine (2)
1-O-Hexadecyl-2-O-ethyl-SN-glycero-3-phosphorylcholine (2)
(S)-(+)-allantoin (2)
Methane (2)
[(2S)-2-pentadecanoyloxy-3-[(Z)-tetradec-9-enoyl]oxypropyl] (6Z,9Z,12Z)-octadeca-6,9,12-trienoate (2)
Methyl 2-diazoacetamidohexonate (2)
Fuconic acid (2)
(2S,3E,6R)-3,7-Dimethyl-3-octene-1,2,6,7-tetrol (2)
2-Arachidonoyl glycerol-d5 (2)
(2S,4S)-2-amino-5-(carbamoylamino)-4-hydroxypentanoic acid (2)
(2Z)-2-aminobut-2-enoic acid (2)
Delta-Tocopherol (2)
Dihydrorhodamine 123 (2)
Ondansetron hydrochloride dihydrate (2)
Pralidoximum (2)
1,2,4,5-Tetramethylbenzene (2)
4-Amino-2-nitrophenol (2)
Isokaempferide (2)
1-Linoleoyl-3-docosahexaenoyl-sn-glycerol (2)
Azulene (2)
Arachidonoyl PAF C-16 (2)
O-Phospho-DL-threonine (2)

Study type

RNA-seq of non coding RNA (1)

Release Date

2025 (115)
2024 (110)
2022 (94)
2023 (83)
2021 (75)
2020 (54)
2019 (29)
2026 (22)
2018 (18)
2017 (14)
2016 (7)
2015 (4)
2013 (2)
2014 (1)
2012 (1)

Lab affiliation

Department of Biochemistry and Structural Biology and Center for Innovative Drug Discovery School of Medicine, University of Texas Health Science Center at San Antonio, 7703 Floyd Curl Drive, San Antonio, TX 78229, United States (2)
New Cornerstone Science Laboratory, State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University, Chengdu, China (2)
Sun Yat-sen University (2)
CAS Center for Excellence in Molecular Plant Science, Chinese Academic on Science (1)
CAS Center for Excellence in Molecular Plant Sciences (1)
College of Pharmacy, Jinan University, Guangzhou, China (1)
Institute for Cell Engineering, Sidney Kimmel Comprehensive Cancer Center, Department of Biological Chemistry, McKusick-Nathans Department of Genetic Medicine, Johns Hopkins University School of Medicine, USA (1)
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (1)
Nanjing Agricultural University, Binjiang Campus (1)
Professor of Human Molecular Metabolism, dr.med. (MD, Doctor of Medical Science), Chief Research Physician, Specialist in Endocrinology, Herlev-Gentofte University Hospital, Department of Clinical Medicine, and Novo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Science, University of Copenhagen, Copenhagen, Denmark (1)
Shandong University (1)
Tongji Hospital (1)
shanghai, china (1)

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Morphology and molecular genetics reveal two new Leptobrachella species in southern China (Anura, Megophryidae).

Not available

S-EPMC6072835 | biostudies-literature

Exploring synergistic effects of Achyranthes bidentata Blume and Paeonia lactiflora Pall. on hypertension with liver yang hyperactivity using the multidisciplinary integrative strategy.

Not available

S-EPMC11550124 | biostudies-literature

Analysis of Metabolite Differences in Different Tea Liquors Based on Broadly Targeted Metabolomics.

Not available

S-EPMC11394687 | biostudies-literature

Differential Protein Expression in HK-2 Cells under Sodium Oxalate and Sodium Selenite Treatments (4D Label Free Proteomics)

This study aims to elucidate differential protein expression in HK-2 cells exposed to sodium oxalate and sodium selenite using 4D label free proteomics.

ORGANISM(S): Homo sapiens (Human)

2026-03-23 | PXD067701 | Pride

5HT - Histone serotonylation is a permissive modification that enhances TFIID binding to H3K4me3

we provide evidence for a new class of histone posttranslational modification (PTM): serotonylation.

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2023-12-04 | MSV000093567 | MassIVE

Comparative metabolomic analysis of exudates of microcystin-producing and microcystin-free Microcystis aeruginosa strains

Cyanobacterial harmful algal blooms (cHABs) dominated by Microcystis aeruginosa threaten the ecological integrity and beneficial uses of lakes globally. In addition to producing hepatotoxic microcystins (MC), M. aeruginosa exudates (MaE) contain various compounds with demonstrat...

2023-01-16 | MTBLS6603 | MetaboLights

Lived experiences of the disease journey among patients with idiopathic pulmonary fibrosis.

Not available

S-EPMC8105533 | biostudies-literature

CT-based skeletal muscle loss predicts long term prognosis in patients with distal cholangiocarcinoma undergone pancreaticoduodenectomy.

Not available

S-EPMC11754836 | biostudies-literature

Influence of sarcopenia on postoperative complications and long-term survival in pancreatic cancer patients undergone pancreaticoduodenectomy.

Not available

S-EPMC11254807 | biostudies-literature

Untargeted Metabolomics of the enthesis interstitial fluid of wild-type and Nlrp3-/- mice with sham operation and injury post 7 days

In order to investigate the effect of the NLRP3 inflammasome on the regeneration of enthesis, we established an enthesis injury and repair model in wild-type and NLRP3-/- mice. The interstitial fluid of enthesis was extracted, and untargeted metabolomics was conducted to discover differential metabo...

2025-07-08 | MTBLS12150 | MetaboLights

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