Ma Han H - OmicsDI

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Unknown (3822)
Proteomics (114)
Metabolomics (40)
Transcriptomics (38)
Genomics (37)
Multiomics (3)

Organisms

Chlamydomonas reinhardtii (95)
Pseudomonas canadensis (95)
Marchantia polymorpha subsp. ruderalis (95)
Methylocystis sp. (95)
Porites pukoensis (95)
Bothrops insularis (95)
Bothrops jararaca (95)
Bothrops jararacussu (95)
Bothrops cotiara (95)
Streptomyces coelicolor (95)
Pseudomonas taiwanensis (95)
Burkholderia ubonensis MSMB22 (95)
Homo sapiens (54)
Mus musculus (11)
Marmota monax (5)
Gallus gallus (3)
Arabidopsis thaliana (3)
Rattus norvegicus (2)
Apis mellifera (2)
Spalax carmeli (1)
Nannospalax galili (1)
Porphyromonas gingivalis (1)
Zea mays (1)
Oryza sativa (1)
Populus tremula x Populus alba (1)
Saccharomyces cerevisiae (1)
Ziziphus jujuba var. spinosa (1)
Bombyx mori (1)
Sus scrofa (1)
Drosophila melanogaster (1)

Repository

pride (95)
biostudies-arrayexpress (40)
MetaboLights (40)
EGA (33)
iProX (15)
PeptideAtlas (3)
ENA (2)
MassIVE (1)

Tissue

Cell culture (20)
Brain (11)
Epithelial cell (9)
Early embryonic cell (6)
Cell suspension culture (6)
Liver (5)
Testis (4)
Others (3)
Plant cell (3)
Leaf (3)
Kidney (3)
Neuron (2)
Heart (2)
Blood plasma (2)
Whole body (2)
Spinal column (1)
Pitcher secretion (1)
CNS neuron (sensu Nematoda and Protostomia) (1)
Neuron of the forebrain (1)
Pollen tube (1)
Haematopoietic stem cells (1)
Esophageal squamous epithelium (1)
Respiratory mucus (1)
Anterior chamber of the eye (1)
Mammary gland epithelial cell (1)
Cyst (1)
Mammary gland (1)
Cartilage (1)
Flower (1)
Cerebrospinal fluid (1)

Disease

Disease free (6)
Brain disease (2)
Alzheimer's disease (2)
Breast cancer (2)
Cataract (1)
Exfoliation syndrome (1)
Esophageal cancer (1)
Pancreatic intraductal papillary-mucinous neoplasm (1)
Primary open angle glaucoma (1)
Osteoarthritis (1)
Chronic kidney disease (1)
COVID-19 (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (95)
Shotgun proteomics (49)
Mass spectrometry (33)
Bottom-up proteomics (21)
Data-dependent acquisition (16)
Affinity purification coupled with mass spectrometry proteomics (10)
Gel-based experiment (8)
NMR spectroscopy (5)
SWATH MS (4)
Data-independent acquisition (3)
Top-down proteomics (3)
Mass spectrometry assay (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
ILLUMINA, Illumina HiSeq 2500, HiSeq X Ten, Illumina HiSeq 2000 (1)
Illumina OMNIExpress, Affymetrix_6.0, HanChinese_Immunochip (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
NMR spectroscopy assay (1)
Proteogenomics (1)
Mass spectrometry imaging (1)
DiaPASEF (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (12)
Liquid Chromatography MS - positive - reverse phase (12)
Liquid Chromatography Tandem MS (LC-MS/MS) (5)
Gas Chromatography MS - positive (4)
LTQ Orbitrap Elite (3)
Bruker (3)
GeneChip Instrument System (2)
Affymetrix mouse gene 1.0 ST arrays (2)
Agilent 2100 Bioanalyzer (2)
Illumina HiSeq 2500 (2)
Nuclear Magnetic Resonance (NMR) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
MS Imaging - (2)
Liquid Chromatography MS - positive - hilic (2)
Illumina HiSeq 2000 platform (1)
Microbeads (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
Liquid Chromatography MS - NEG - HILIC (1)
Liquid Chromatography MS - POS - HILIC (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
7000C Triple Quadrupole GC/MS (Agilent) (1)
Liquid Chromatography MS - Negative (LC-MS (Neg)) (1)
Liquid Chromatography MS - Positive (LC-MS (Pos)) (1)
Direct infusion MS - (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - positive (1)
Gas Chromatography MS - (1)

Publication Date

2022 (22)
2025 (21)
2023 (20)
2019 (17)
2026 (16)
2021 (15)
2024 (15)
2020 (14)
2014 (8)
2012 (8)
2017 (7)
2015 (4)
2010 (4)
2018 (4)
2013 (3)
2007 (3)
2016 (2)
2009 (2)
2011 (1)
2006 (1)

UNIPROT ID/AC

Q99619 (3)
Q6ZVE7 (3)
Q8N4U5 (3)
Q9UBZ4 (3)
Q96QP1 (3)
Q9Y576 (3)
Q6ZTQ3 (3)
Q9H633 (3)
Q96PC5-2 (3)
Q96PC5 (3)
Q8TDW5 (3)
Q9NXZ2 (3)
Q8IZP6 (3)
Q9UHA2 (3)
Q9C019 (3)
Q96EP1 (3)
Q8IYM2 (3)
Q86SJ2 (3)
Q6MZQ0 (3)
Q9Y2C3 (3)
O00338 (3)
Q02833 (3)
O43194 (3)
Q9BZD2 (3)
Q8WUA8 (3)
Q8NC06 (3)
Q8N1W1 (3)
Q6NSJ2 (3)
Q8WYP3 (3)
Q3MII6 (3)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000247315 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:30769 (14)
CHEBI:32816 (14)
CHEBI:15891 (13)
CHEBI:15354 (13)
CHEBI:15741 (13)
CHEBI:15428 (12)
CHEBI:27266 (12)
CHEBI:17368 (12)
CHEBI:28044 (12)
CHEBI:18186 (12)
CHEBI:16359 (11)
CHEBI:7916 (11)
CHEBI:16704 (11)
CHEBI:17568 (11)
CHEBI:17596 (11)
CHEBI:16335 (11)
CHEBI:16449 (11)
CHEBI:16919 (11)
CHEBI:16811 (11)
CHEBI:25094 (11)
CHEBI:15366 (10)
CHEBI:17351 (10)
CHEBI:18012 (10)
CHEBI:17126 (10)
CHEBI:73024 (10)
CHEBI:15756 (10)
CHEBI:16027 (10)
CHEBI:27897 (10)
CHEBI:17822 (10)
CHEBI:16737 (10)

Metabolite Name

Choline (11)
Valine (10)
Creatine (10)
Uracil (9)
Hypoxanthine (9)
Methionine (8)
Glycine (8)
Taurine (8)
Acetate (7)
Betaine (7)
Carnitine (7)
Lysine (7)
Serine (7)
Alanine (7)
Threonine (7)
Phenylalanine (7)
Isoleucine (7)
Adenosine (7)
Adenine (7)
Creatinine (7)
Uridine (7)
Leucine (6)
Tyrosine (6)
Histamine (6)
Proline (6)
Glutamine (6)
Pyruvate (6)
Lactate (6)
Uric acid (6)
Xanthine (6)

First Public Date

2023 (2)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (22)
RNA-seq of coding RNA (11)
Transcription profiling by MPSS (1)
Unknown experiment type (1)
Transcription profiling by tiling array (1)
Comparative genomic hybridization by array (1)
ChIP-seq (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (549)
2022 (452)
2024 (448)
2023 (422)
2021 (407)
2020 (313)
2018 (227)
2019 (205)
2017 (174)
2016 (139)
2015 (128)
2014 (97)
2013 (70)
2026 (67)
2012 (44)
2011 (43)
2010 (28)
2009 (22)
2008 (13)
2007 (7)
2006 (5)
2005 (1)
2004 (1)

Lab affiliation

Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital (6)
School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, Guangdong, China (3)
Department of Plant Science and Technology, Chung-Ang University, Anseong, Republic of Korea (3)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Associate Editor, ACS Chemical Biology (2)
Mayo Clinic, Department of Oncology (2)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Executive Editor, ACS Chemical Biology (2)
China agricultural university, preventive veterinary medicine (2)
Brain Injury Center, Renji Hospital, School of Medicine, Shanghai Jiao Tong University; Shanghai Institute of Head Trauma, Shanghai, China, 200127. (2)
State Key Laboratory of Reproductive Medicine and Offspring Health, Department of Histology and Embryology, Gusu School, Nanjing Medical University (2)
Department of Integration of Chinese and Western Medicine, School of Basic Medicine Science, Peking University, China (1)
James McGill Professor of Neurology and Neurosurgery and Anatomy and Cell Biology Montreal Neurological Institute-Hospital McGill, Montreal CANADA (1)
Department of Medical Device Management and Research, SAIHST, Sungkyunkwan University, Seoul 06355, Korea (1)
School of Medicine, School of Life Sciences, Westlake University, Hangzhou, Zhejiang, China. (1)
Center for Addiction Research Department of Pharmacology and Toxicology The University of Texas Medical Branch Galveston, TX 77555 (1)
Institute of Zoology, Guangdong Academy of Sciences (1)
Institute of Botany, the Chinese Academy of Science (1)
Univeristy of California, San Francisco (1)
College of Biology and the Environment, Nanjing Forestry University (1)
State Key Laboratory of Respiratory Disease, Institute of Drug Discovery, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences (1)
Therapeutics & Biotechnology Division, Korea Research Institute of Chemical Technology, Daejeon 34114, Republic of Korea (1)
Department of Plant Biotechnology and Bioinformatics, Ghent University; 9052 Ghent, Belgium; Center for Plant Systems Biology, VIB; 9052 Ghent, Belgium (1)
School of Biological Sciences, Seoul National University, Seou, 08826, Korea (1)
Institute of Apicultural Research, Chinese Academy of Agricultural Sciences, No. 1 Beigou Xiangshan, Beijing, 100193, China (1)
Department of Neurology, Shandong Provincial Hospital affiliated to Shandong University, No. 324 Jingwuweiqi Road, Jinan, 250021, Shandong, P. R. China. (1)
Korea University (1)
Department of Cell Biology, School of Basic Medical Sciences, Cheeloo College of Medicine, Shandong University, Jinan 250012, China. (1)
Department of Cardiology, the Fifth Affiliated Hospital of Zunyi Medical University, Zhuhai 519100, Guangdong, P.R. China (1)
Ive De Smet - Group leader Functional Phosphoproteomics VIB-UGent Center for Plant Systems Biology Ghent University Technologiepark-Zwijnaarde 71 - 9052 Ghent - Belgium www.psb.ugent.be (1)
State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, South China Agricultural University, Guangzhou, China (1)
Epithelial Systems Biology Laboratory, National Heart, Lung, and Blood Institute, National Institutes of Health (1)

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Comparison of the performance of two commercial genome-wide association study genotyping platforms in Han Chinese Samples

Affymetrix 6.0, Illumina OMNIExpress, and llumina Immunochip genotype data for Han Chinese population including rheumatoid arthritis cases and controls. Data is in PLINK binary format. Illumina genotype clustering was performed using Illuminaâ€™s BeadStudio software. SNPs were reclustered using the ...

EGAS00000000131 | EGA

Micro-RNAs in Adult Rat Liver are Refractory to 19 Hours Dioxin Exposure

Dioxin-like chemicals are well-known for their ability to upregulate expression of numerous genes via the AH receptor (AHR). However, recent transcriptomic analyses in several laboratories indicate that dioxin-like chemicals or AHR genotype itself also can downregulate levels of mRNAs encoded by nu...

ORGANISM(S): Rattus norvegicus

2007-08-15 | E-GEOD-8467 | biostudies-arrayexpress

HanChinese_Immunochip - samples

Han Chinese samples using Immunochip

EGAD00010000425 | EGA

HanChinese_Affymetrix_Controls - samples

Han Chinese samples using Affymetrix (controls)

EGAD00010000421 | EGA

HanChinese_Affymetrix_Cases - samples

Han Chinese samples using Affymetrix (cases)

EGAD00010000419 | EGA

HanChinese_OMNIExpress_Cases - samples