Sort   by:  
 Page size 
TranscriptomicsHuh7 cells exist as a mixed population of cells with distinct patterns of gene methylation
A powerful approach to study innate antiviral response is to compare the difference between wild type Huh7 cells, which do not support robust replication of hepatitis C virus (HCV)2, versus certain subclones of Huh7 cells that are permissive for HCV replication. We generated two permissive cell line...
ORGANISM(S): Homo sapiens 
2013-07-03 | E-GEOD-31960 | biostudies-arrayexpress
TranscriptomicsHCV Replication: permissive and non-permissive cells
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Homo sapiens 
2013-07-03 | E-GEOD-31962 | biostudies-arrayexpress
TranscriptomicsMX1 is Silenced in Permissive HRP4 Cells Supporting HCV Replication
MX1 is a well-characterized interferon-induced antiviral gene. MX1 is activated by viral infection due to interferon production in cells. We treated non-permissive Huh7 cells and permissive HRP4 cells with interferon. We compared the expression of genes induced by interferon to determine host factor...
ORGANISM(S): Homo sapiens 
2013-07-03 | E-GEOD-31903 | biostudies-arrayexpress
ProteomicsProteome and lipidome of Urine-derived Exosomes in Mycobacterium tuberculosis Infected Patients
This study confirmed the aberrant lipids and protein spectrum in exosomes of Mtb infected individuals, uncovered novel potential lipid biomarkers for TB/LTBI diagnosis and revealed integral role of exosomal lipid-raft-dependent biological processes in TB pathogenesis.
ORGANISM(S): Homo Sapiens 
2024-03-04 | PXD050345 |
MetabolomicsMetabolic reaction network-based recursive metabolite annotation for untargeted metabolomics (Aging mouse liver negative mode)

Large-scale metabolite annotation is a challenge in liquid chromatogram-mass spectrometry (LC-MS)-based untargeted metabolomics. Here, we develop a metabolic reaction network (MRN)-based recursive algorithm (MetDNA) that expands metabolite annotations without the need for a comprehensive standard...

2019-03-26 | MTBLS606 | MetaboLights
MetabolomicsUnknown Metabolite Annotation in Mouse Aging using Ion Mobility Collision Cross-Section Atlas (AllCCS)

The metabolome includes not just known but also unknown metabolites; however, metabolite annotation remains the bottleneck in untargeted metabolomics. Ion mobility – mass spectrometry (IM-MS) has emerged as a promising technology by providing multi-dimensional characterizations of metabolites. He...

2020-07-28 | MTBLS1622 | MetaboLights
MetabolomicsKnown Metabolite Annotation in Different Biological Samples using Ion Mobility Collision Cross-Section Atlas (AllCCS)

The metabolome includes not just known but also unknown metabolites; however, metabolite annotation remains the bottleneck in untargeted metabolomics. Ion mobility – mass spectrometry (IM-MS) has emerged as a promising technology by providing multi-dimensional characterizations of metabolites. He...

2020-07-28 | MTBLS1693 | MetaboLights
Sort   by:  
 Page size