Ma Tong T - OmicsDI

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Unknown (1732)
Proteomics (52)
Transcriptomics (15)
Metabolomics (12)
Genomics (6)
Multiomics (3)
Genomic (1)

Organisms

Homo sapiens (41)
Mus musculus (7)
Escherichia coli (5)
Thermococcus eurythermalis (4)
Rattus norvegicus (3)
Mycobacterium tuberculosis H37Rv_2009 (2)
Staphylococcus aureus (2)
Chlorocebus sabaeus (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Vibrio cholerae O1 biovar El Tor str. N16961 (1)
Arabidopsis thaliana (1)
Caldanaerobacter subterraneus subsp. tengcongensis MB4 (1)
Catalpa fargesii (1)
Rattus rattus (1)
Sus scrofa domesticus (1)

Organisms

Mus musculus (2)

Repository

pride (27)
iProX (20)
biostudies-arrayexpress (15)
MetaboLights (12)
EGA (4)
PeptideAtlas (3)
MassIVE (2)
ENA (2)
dbGaP (1)

Tissue

Cell culture (4)
Others (3)
Kidney (2)
Liver (2)
Anterior chamber of the eye (1)
B cell (1)
Blood (1)
Blood plasma (1)
Brain (1)
Cell suspension culture (1)
Early embryonic cell (1)
Embryonic stem cell (1)
Epithelial cell (1)
Inner ear (1)
Leaf (1)
Lung (1)
Monocyte (1)
Regulation of neuron death (1)
Skin (1)
T cell (1)
Whole body (1)

Disease

Acute leukemia (1)
Disease free (1)
Human immunodeficiency virus infectious disease (1)
Myopia (1)
Polycystic Kidney (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (27)
Shotgun proteomics (19)
Mass spectrometry (8)
Bottom-up proteomics (6)
Mass spectrometry assay (4)
Data-dependent acquisition (2)
Affymetrix 6.0 (1)
NMR spectroscopy assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
DiaPASEF (1)
Gel-based experiment (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (5)
LTQ Orbitrap Elite (2)
Orbitrap Elite mass spectrometer(Thermo) (1)
Orbitrap Exploris 480 (1)
Q Exactive HF-X (1)
Q Exactive Plus (1)
API 4000 QTRAP (AB Sciex) (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Nuclear Magnetic Resonance (NMR) - (1)
TSQ Quantum XLS (Thermo Scientific) (1)
QExactive (1)

Publication Date

2022 (12)
2021 (11)
2024 (8)
2014 (7)
2025 (7)
2012 (5)
2026 (5)
2023 (5)
2020 (5)
2016 (4)
2019 (4)
2017 (2)
2015 (1)
2011 (1)
2006 (1)
2013 (1)

UNIPROT ID/AC

A0A024R563 (3)
A0A024R8H9 (3)
A0A024RAN2 (3)
A0A024RC46 (3)
A0A087WUD1 (3)
A0A087WVZ5 (3)
A0A087WWK8 (3)
A0A087WXI0 (3)
A0A087WZE9 (3)
A0A087X1S3 (3)
A0A0A0MR66 (3)
A0A0A0MS51 (3)
A0A0A0MSA7 (3)
A0A0B4J220 (3)
A0A0C4DG89 (3)
A0A0C4DGT3 (3)
A0AV96 (3)
A0AVT1 (3)
A0FGR8 (3)
A0FGR8-2 (3)
A0FGR8-6 (3)
A0JLT2 (3)
A0JNW5 (3)
A0MZ66 (3)
A0PJW6 (3)
A0PK00 (3)
A1A4S6 (3)
A1L0T0 (3)
A1L170 (3)
A1L390 (3)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:15428 (5)
CHEBI:15756 (5)
CHEBI:16708 (5)
CHEBI:16750 (5)
CHEBI:78320 (5)
CHEBI:15611 (4)
CHEBI:15940 (4)
CHEBI:16040 (4)
CHEBI:16235 (4)
CHEBI:16335 (4)
CHEBI:16344 (4)
CHEBI:16449 (4)
CHEBI:16704 (4)
CHEBI:16919 (4)
CHEBI:17154 (4)
CHEBI:17368 (4)
CHEBI:17509 (4)
CHEBI:17562 (4)
CHEBI:17596 (4)
CHEBI:17822 (4)
CHEBI:18186 (4)
CHEBI:22660 (4)
CHEBI:25017 (4)
CHEBI:25094 (4)
CHEBI:26986 (4)
CHEBI:27570 (4)
CHEBI:28044 (4)
CHEBI:29016 (4)
CHEBI:30769 (4)
CHEBI:14314 (3)

Metabolite Name

L-Allothreonine (4)
Adenine (3)
Arecoline (3)
Benzoic acid (3)
Beta-Tyrosine (3)
Ethanolamine (3)
Glycine (3)
Guanosine (3)
Inosine (3)
L-Homophenylalanine (3)
L-Leucine (3)
Phosphonoacetate (3)
Propylene glycol (3)
Pyridoxine (3)
Pyroglutamic acid (3)
Taurine (3)
(-)-Allantoin (2)
(1R,2R,9R)-1-piperidin-2-yl-3,15-diazatetracyclo[7.7.1.02,7.010,15]heptadecane (2)
(1R,4R,5R)-2-methyl-5-[(2S)-6-methylhept-5-en-2-yl]cyclohex-2-ene-1,4-diol (2)
(2E)-Decenoyl-ACP (2)
(2S,3E,6R)-3,7-Dimethyl-3-octene-1,2,6,7-tetrol (2)
(2S,4S)-2-amino-5-(carbamoylamino)-4-hydroxypentanoic acid (2)
(2Z)-2-aminobut-2-enoic acid (2)
(3Z,6Z,9Z)-dodecatrienol (2)
(8R,9R,10R,13S,14R,17R)-13-ethyl-17-ethynyl-17-hydroxy-1,2,6,7,8,9,10,11,12,14,15,16-dodecahydrocyclopenta[a]phenanthren-3-one (2)
(S)-(+)-allantoin (2)
1,2,4,5-Tetramethylbenzene (2)
1,2-Dipentadecanoyl-sn-glycero-3-phosphocholine (2)
1,2-di-[(11Z)-eicosenoyl]-sn-glycero-3-phosphocholine (2)
1,3-Diisopropylbenzene (2)

First Public Date

2022 (2)

Study type

Transcription profiling by array (11)
RNA-seq of coding RNA (4)

Release Date

2022 (267)
2025 (248)
2023 (230)
2021 (218)
2024 (193)
2020 (123)
2019 (82)
2017 (65)
2016 (62)
2018 (62)
2026 (53)
2015 (51)
2014 (28)
2012 (17)
2013 (11)
2011 (10)
2009 (8)
2010 (6)
2008 (6)
2006 (3)
2007 (3)
2004 (1)

Lab affiliation

Laboratory of Microbiology Oceanography, State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, State Key Laboratory of Ocean Engineering, Shanghai Jiao Tong University, School of Oceanography, Shanghai JiaoTong University (4)
Department of Laboratory Medicine, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China. (2)
Shanghai Institute of Rheumatology, Renji Hospital, Shanghai Jiao Tong University School of Medicine (SJTUSM) (2)
Shanghai Jiao Tong University (2)
1.Department of Otolaryngology-Head and Neck Surgery, Shanghai Ninth People's Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China 2.Ear Institute, Shanghai Jiao Tong University School of Medicine, Shanghai, China 3.Shanghai Key Laboratory of Translational Medicine on Ear and Nose Diseases, Shanghai, China (1)
Bio-X Institutes, Key Laboratory for the Genetics of Development and Neuropsychiatric Disorders (Ministry of Education), Shanghai Key Laboratory of Psychotic Disorders, and Brain Science and Technology Research Center, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China. (1)
Charles Perkins Centre, School of Medical Sciences, University of Sydney, Sydney, Australia. (1)
College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi 712100, P.R. China (1)
Department of Biological Sciences Rutgers University Newark (1)
Department of Immunology & National Key Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (CAMS) & Peking Union Medical College, Beijing (1)
Department of Ophthalmology, Shanghai General Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200080, China. (1)
Department of Respiratory and Critical Care Medicine, Beijing Institute of Respiratory Medicine and Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China (1)
Dept. of Molecular Biology, Princeton, NJ USA 08544 (1)
John Cijiang He, MD/PhD Division of Nephrology, Box 1243 Mount Sinai School of Medicine One Gustave L Levy Place, New York NY 10029 Tel: 212-659-1703, Fax: 212-987-0389 (1)
Proteomics (1)
School of Medicine, School of Life Sciences, Westlake University, Hangzhou, Zhejiang, China. (1)
Shanghai Jiao Tong University Affiliated Sixth People's Hospital (1)
State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China. (1)
State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry (1)
University of Florida (1)
Westlake University (1)

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Proteomic Profiling and Functional Analysis of B Cell-Derived Exosomes upon Pneumocystis Infection

Pneumocystis is a life-threatening fungal pathogen frequently causing fatal pneumonia (PCP) in immunocompromised individuals with high mortality. Recently, B cells have been reported to play a crucial role in the pathogenesis of PCP through producing antibodies and activating CD4+ T cell response. E...

ORGANISM(S): Mus musculus (Mouse)

2022-04-26 | PXD030103 | Pride

MA Cation-Induced Diffusional Growth of Low-Bandgap FA-Cs Perovskites Driven by Natural Gradient Annealing.

Not available

S-EPMC8391048 | biostudies-literature

IFN-γ Driven Hepatic Injury Exacerbates Mortality in NK/T-Cell Lymphoma-Associated Hemophagocytic Lymphohistiocytosis.

Not available

S-EPMC12906978 | biostudies-literature

Glucose limitation activates AMPK coupled SENP1-Sirt3 signalling in mitochondria for T cell memory development.

Not available

S-EPMC8285428 | biostudies-literature

Identification of a Novel Angiogenesis and Tumor Suppressor Gene Rab25 in Esophageal Squamous Cell Carcinoma

Twelve clinical samples from human esophageal squamous cell carcinoma (ESCC) (seven tumors and five non-tumors) were sequenced using Illumina high-throughput sequencing and the RNA-Seq profiling was investigated with 1730 genes significantly differentially expressed. The gene Rab25 was found to be d...

ORGANISM(S): Homo sapiens

2012-12-05 | E-GEOD-32424 | biostudies-arrayexpress

Microbiome and metabolome features in inflammatory bowel disease via multi-omics integration analyses across cohorts

The perturbations of the gut microbiota and metabolites are closely associated with the progression of inflammatory bowel disease (IBD). However, inconsistent findings across studies impede a comprehensive understanding of their roles in IBD and their potential as reliable diagnostic biomarkers. ...

2026-01-28 | MTBLS8713 | MetaboLights

Spatial and Single-Cell Transcriptomics Reveal a Cancer-Associated Fibroblast Subset in HNSCC That Restricts Infiltration and Antitumor Activity of CD8+ T Cells.

Not available

S-EPMC10790129 | biostudies-literature

Clinical advances and challenges associated with TCR-T cell therapy for cancer treatment.

Not available

S-EPMC11493697 | biostudies-literature

Metabolomic Responses of Arabidopsis Suspension Cells to Bicarbonate under Light and Dark Conditions

Global CO2 level presently recorded at 400 ppm is expected to reach 550 ppm in 2050, an increment likely to impact plant growth and productivity. Using targeted LC-MS and GC-MS platforms we quantified 229 and 29 metabolites, respectively in a time-course study to reveal short-term responses to diffe...

2017-04-25 | MTBLS311 | MetaboLights

Temperature-dependent Proteome Study of Thermoanaerobacter tengcongensis

Comprehensive and quantitative information of the thermophile proteome is an important source for understanding of the survival mechanism under high growth temperature. Thermoanaerobacter tengcongensis (T. tengcongensis), a typical anaerobic thermophilic eubacterium, was selected to quantitatively e...

ORGANISM(S): Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Caldanaerobacter subterraneus subsp. tengcongensis)

2013-08-13 | PXD000264 | Pride

Ms/ms Tte Itraq

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1818 Results

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