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ProteomicsMouse organ specific spectral library and DIA analysis of the plasma proteome
The plasma proteome is highly dynamic and variable, composed of proteins derived from surrounding tissues and cells. To investigate the complex processes that contribute to the plasma proteome homeostasis we developed a mass spectrometry based proteomics strategy to infer the origin of proteins dete...
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
2017-11-08 | MSV000081695 | MassIVE
UnknownThe structure of human dermatan sulfate epimerase 1 emphasizes the importance of C5-epimerization of glucuronic acid in higher organisms.
Not available
S-EPMC8006597 | biostudies-literature
UnknownDeciphering the Mode of Action of the Processive Polysaccharide Modifying Enzyme Dermatan Sulfate Epimerase 1 by Hydrogen-Deuterium Exchange Mass Spectrometry.
Not available
S-EPMC4755500 | biostudies-literature
ProteomicsCOVID-19 proteome profiling reveals resolution of inflammatory pathways and respiratory distress after DNase treatment
Severe COVID-19 can result in pneumonia and acute respiratory failure. Accumulation of mucus in the airways is a hall mark of the disease and can result in hypoxemia. Here, we show that quantitative proteome analysis of the sputum from severe COVID-19 patients reveal high levels of neutrophil extrac...
ORGANISM(S): Homo sapiens (Human) 
2021-07-05 | PXD021197 | Pride
Human plasma dia swath-ms covid-19 hf-x 
ProteomicsCerebrospinal fluid proteome maps detect pathogen-specific host response patterns in meningitis
Meningitis is a life-threatening condition characterized by the inflammation of the leptomeningeal membranes surrounding the brain and spinal cord. The term meningitis is an umbrella term and includes several different etiologies. The majorities of meningitis cases are caused by viruses (viral menin...
ORGANISM(S): Homo sapiens (Human) 
2021-04-12 | PXD023174 | Pride
Human Cerebrospinal fluid Meningitis 
ProteomicsMouse organ specific spectral library and DIA analysis of the plasma proteome
The plasma proteome is highly dynamic and variable, composed of proteins derived from surrounding tissues and cells. To investigate the complex processes that contribute to the plasma proteome homeostasis we developed a mass spectrometry based proteomics strategy to infer the origin of proteins dete...
ORGANISM(S): Mus musculus (Mouse) 
2015-11-23 | PXD002896 | Pride
Dia Mouse Plasma Sepsis Organs 
TranscriptomicsThe retinoblastoma gene is targeted for rearrangements in BRCA1-deficient basal-like breast cancer.
Breast tumors from BRCA1 germ line mutation carriers typically exhibit features of the basal-like molecular subtype. However, the specific genes recurrently mutated as a consequence of BRCA1 dysfunction have not been fully elucidated. In this study, we utilized gene expression profiling to molecular...
ORGANISM(S): Homo sapiens 
2012-06-26 | E-GEOD-25307 | biostudies-arrayexpress
ProteomicsT00
yeast cell-cycle experiment
ORGANISM(S): Saccharomyces Cerevisiae (yeast) 
2007-12-31 | PAe000093 | PeptideAtlas
ProteomicsD.melanogaster - Whole organism, SC (Brunner,nat_biotechnol,2007)
abundance based on Spectral counting, Interaction consistency score: 20.4, Coverage: 62
ORGANISM(S): 7227 
2007-00-00 | 1963625303 | PAXDB
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